RNA–Protein interactions for RNA: ENST00000321143.8

HCCS-201, Transcript of holocytochrome c synthase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HCCS, Length 2,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCS-201ENST00000321143 HNRNPUL2Q1KMD3 747 aaKnown RBP28.58■■■□□ 2.17
HCCS-201ENST00000321143 PBRM1Q86U86 1689 aa28.52■■■□□ 2.16
HCCS-201ENST00000321143 CUL7Q14999 1698 aa28.48■■■□□ 2.15
HCCS-201ENST00000321143 EIF4G3O43432 1585 aaKnown RBP28.47■■■□□ 2.15
HCCS-201ENST00000321143 GRIN2BQ13224 1484 aa28.41■■■□□ 2.14
HCCS-201ENST00000321143 ARHGAP35Q9NRY4 1499 aa28.38■■■□□ 2.13
HCCS-201ENST00000321143 DIEXFQ68CQ4 756 aaKnown RBP28.38■■■□□ 2.13
HCCS-201ENST00000321143 KANK4Q5T7N3 995 aaPredicted RBP28.34■■■□□ 2.13
HCCS-201ENST00000321143 SNAPC4Q5SXM2 1469 aa28.34■■■□□ 2.13
HCCS-201ENST00000321143 ADAMTS12P58397 1594 aa28.33■■■□□ 2.13
HCCS-201ENST00000321143 FHAD1B1AJZ9 1412 aa28.31■■■□□ 2.12
HCCS-201ENST00000321143 ZNF316A6NFI3 1004 aaPredicted RBP28.27■■■□□ 2.12
HCCS-201ENST00000321143 P3H3Q8IVL6 736 aa28.26■■■□□ 2.11
HCCS-201ENST00000321143 CTTNBP2Q8WZ74 1663 aa28.25■■■□□ 2.11
HCCS-201ENST00000321143 FBLN2P98095 1184 aa28.21■■■□□ 2.11
HCCS-201ENST00000321143 RRBP1Q9P2E9 1410 aaKnown RBP28.21■■■□□ 2.11
HCCS-201ENST00000321143 CHMP7Q8WUX9 453 aaPredicted RBP28.14■■■□□ 2.1
HCCS-201ENST00000321143 MAGI1Q96QZ7 1491 aaPredicted RBP28.13■■■□□ 2.09
HCCS-201ENST00000321143 SCAF1Q9H7N4 1312 aaKnown RBP28.12■■■□□ 2.09
HCCS-201ENST00000321143 GRIN2AQ12879 1464 aa28.12■■■□□ 2.09
HCCS-201ENST00000321143 CLSPNQ9HAW4 1339 aa28.09■■■□□ 2.09
HCCS-201ENST00000321143 MAP3K1Q13233 1512 aa28.09■■■□□ 2.09
HCCS-201ENST00000321143 CCNB3Q8WWL7 1395 aa28.08■■■□□ 2.09
HCCS-201ENST00000321143 SYNJ2O15056 1496 aa28.08■■■□□ 2.09
HCCS-201ENST00000321143 FHOD3Q2V2M9 1422 aa28.08■■■□□ 2.09
HCCS-201ENST00000321143 DHX57Q6P158 1386 aaKnown RBP28.07■■■□□ 2.08
HCCS-201ENST00000321143 TIAM1Q13009 1591 aa28.06■■■□□ 2.08
HCCS-201ENST00000321143 CEP170Q5SW79 1584 aa28.01■■■□□ 2.07
HCCS-201ENST00000321143 ACIN1Q9UKV3 1341 aaKnown RBP28.01■■■□□ 2.07
HCCS-201ENST00000321143 IQGAP2Q13576 1575 aa28■■■□□ 2.07
HCCS-201ENST00000321143 LRRC9Q6ZRR7 1453 aa27.95■■■□□ 2.07
HCCS-201ENST00000321143 SAMD9Q5K651 1589 aa27.94■■■□□ 2.06
HCCS-201ENST00000321143 NEUROD1Q13562 356 aa27.94■■■□□ 2.06
HCCS-201ENST00000321143 EFCAB5A4FU69 1503 aa27.93■■■□□ 2.06
HCCS-201ENST00000321143 KIAA0586Q9BVV6 1533 aa27.93■■■□□ 2.06
HCCS-201ENST00000321143 CENPBP07199 599 aaPredicted RBP27.92■■■□□ 2.06
HCCS-201ENST00000321143 CHD1O14646 1710 aa27.92■■■□□ 2.06
HCCS-201ENST00000321143 PCF11O94913 1555 aaKnown RBP27.9■■■□□ 2.06
HCCS-201ENST00000321143 ATP1B4Q9UN42 357 aaPredicted RBP27.89■■■□□ 2.06
HCCS-201ENST00000321143 NUP160Q12769 1436 aa27.88■■■□□ 2.05
HCCS-201ENST00000321143 CFAP43Q8NDM7 1665 aa27.88■■■□□ 2.05
HCCS-201ENST00000321143 ITGAEP38570 1179 aa27.88■■■□□ 2.05
HCCS-201ENST00000321143 PHLDB1Q86UU1 1377 aa27.82■■■□□ 2.04
HCCS-201ENST00000321143 UGGT2Q9NYU1 1516 aa27.82■■■□□ 2.04
HCCS-201ENST00000321143 DISP1Q96F81 1524 aa27.81■■■□□ 2.04
HCCS-201ENST00000321143 FYCO1Q9BQS8 1478 aa27.81■■■□□ 2.04
HCCS-201ENST00000321143 JPH4Q96JJ6 628 aa27.79■■■□□ 2.04
HCCS-201ENST00000321143 CASKIN1Q8WXD9 1431 aa27.78■■■□□ 2.04
HCCS-201ENST00000321143 MIER1Q8N108 512 aa27.77■■■□□ 2.04
HCCS-201ENST00000321143 RAB3GAP2Q9H2M9 1393 aa27.77■■■□□ 2.04
HCCS-201ENST00000321143 FMN1Q68DA7 1419 aa27.73■■■□□ 2.03
HCCS-201ENST00000321143 KIAA0556O60303 1618 aa27.73■■■□□ 2.03
HCCS-201ENST00000321143 LRRIQ1Q96JM4 1722 aa27.71■■■□□ 2.03
HCCS-201ENST00000321143 SETD5Q9C0A6 1442 aa27.7■■■□□ 2.03
HCCS-201ENST00000321143 ARID3CA6NKF2 412 aa27.69■■■□□ 2.02
HCCS-201ENST00000321143 FAM50AQ14320 339 aaKnown RBP27.69■■■□□ 2.02
HCCS-201ENST00000321143 MAPKBP1O60336 1514 aa27.63■■■□□ 2.01
HCCS-201ENST00000321143 GTF3C3Q9Y5Q9 886 aa27.62■■■□□ 2.01
HCCS-201ENST00000321143 YTHDC1Q96MU7 727 aaKnown RBP27.6■■■□□ 2.01
HCCS-201ENST00000321143 PRG4Q92954 1404 aaPredicted RBP27.59■■■□□ 2.01
HCCS-201ENST00000321143 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.58■■■□□ 2.01
HCCS-201ENST00000321143 ERCC6L2Q5T890 1561 aa27.56■■■□□ 2
HCCS-201ENST00000321143 CARMIL2Q6F5E8 1435 aa27.53■■■□□ 2
HCCS-201ENST00000321143 PLB1Q6P1J6 1458 aa27.53■■■□□ 2
HCCS-201ENST00000321143 CDK13Q14004 1512 aaKnown RBP27.51■■□□□ 1.99
HCCS-201ENST00000321143 MTUS2Q5JR59 1369 aa27.51■■□□□ 1.99
HCCS-201ENST00000321143 FGD6Q6ZV73 1430 aa27.49■■□□□ 1.99
HCCS-201ENST00000321143 CLASP1Q7Z460 1538 aa27.49■■□□□ 1.99
HCCS-201ENST00000321143 SHROOM2Q13796 1616 aa27.49■■□□□ 1.99
HCCS-201ENST00000321143 EPRSP07814 1512 aaKnown RBP27.46■■□□□ 1.99
HCCS-201ENST00000321143 MAGI3Q5TCQ9 1506 aa27.46■■□□□ 1.99
HCCS-201ENST00000321143 HECW1Q76N89 1606 aa27.45■■□□□ 1.99
HCCS-201ENST00000321143 NUP153P49790 1475 aaKnown RBP27.45■■□□□ 1.98
HCCS-201ENST00000321143 RAPGEF6Q8TEU7 1601 aa27.44■■□□□ 1.98
HCCS-201ENST00000321143 NCOA2Q15596 1464 aa27.38■■□□□ 1.97
HCCS-201ENST00000321143 PTPRGP23470 1445 aa27.38■■□□□ 1.97
HCCS-201ENST00000321143 SIN3AQ96ST3 1273 aa27.37■■□□□ 1.97
HCCS-201ENST00000321143 EHBP1L1Q8N3D4 1523 aa27.36■■□□□ 1.97
HCCS-201ENST00000321143 PELP1Q8IZL8 1130 aaKnown RBP27.36■■□□□ 1.97
HCCS-201ENST00000321143 SUPT6HQ7KZ85 1726 aaKnown RBP27.35■■□□□ 1.97
HCCS-201ENST00000321143 MYOM3Q5VTT5 1437 aa27.35■■□□□ 1.97
HCCS-201ENST00000321143 CCDC18Q5T9S5 1454 aa27.34■■□□□ 1.97
HCCS-201ENST00000321143 OSCARQ8IYS5 282 aa27.33■■□□□ 1.97
HCCS-201ENST00000321143 ABCA8O94911 1581 aa27.33■■□□□ 1.96
HCCS-201ENST00000321143 TIMELESSQ9UNS1 1208 aa27.32■■□□□ 1.96
HCCS-201ENST00000321143 PTPRKQ15262 1439 aa27.3■■□□□ 1.96
HCCS-201ENST00000321143 HFM1A2PYH4 1435 aa27.29■■□□□ 1.96
HCCS-201ENST00000321143 ARHGEF11O15085 1522 aa27.26■■□□□ 1.95
HCCS-201ENST00000321143 PTPN23Q9H3S7 1636 aa27.24■■□□□ 1.95
HCCS-201ENST00000321143 ATP10BO94823 1461 aa27.23■■□□□ 1.95
HCCS-201ENST00000321143 UACAQ9BZF9 1416 aa27.2■■□□□ 1.95
HCCS-201ENST00000321143 NAIPQ13075 1403 aa27.19■■□□□ 1.94
HCCS-201ENST00000321143 PPP1R15AO75807 674 aaPredicted RBP27.16■■□□□ 1.94
HCCS-201ENST00000321143 TCOF1Q13428 1488 aaKnown RBP27.15■■□□□ 1.94
HCCS-201ENST00000321143 CDK11AQ9UQ88 783 aaPredicted RBP27.11■■□□□ 1.93
HCCS-201ENST00000321143 KIF14Q15058 1648 aa27.1■■□□□ 1.93
HCCS-201ENST00000321143 TROQ12816 1431 aaPredicted RBP27.09■■□□□ 1.93
HCCS-201ENST00000321143 TONSLQ96HA7 1378 aa27.09■■□□□ 1.93
HCCS-201ENST00000321143 ABCC2Q92887 1545 aa27.08■■□□□ 1.93
HCCS-201ENST00000321143 PLEKHD1A6NEE1 506 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 877 ms