RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 MROH2BQ7Z745 1585 aa18.51■□□□□ 0.55
NBPF3-201ENST00000318220 CLIP1P30622 1438 aa18.49■□□□□ 0.55
NBPF3-201ENST00000318220 JPH4Q96JJ6 628 aa18.47■□□□□ 0.55
NBPF3-201ENST00000318220 SMARCA2P51531 1590 aa18.44■□□□□ 0.54
NBPF3-201ENST00000318220 MYT1Q01538 1121 aa18.43■□□□□ 0.54
NBPF3-201ENST00000318220 DCAF1Q9Y4B6 1507 aa18.4■□□□□ 0.54
NBPF3-201ENST00000318220 ATAD2BQ9ULI0 1458 aa18.38■□□□□ 0.53
NBPF3-201ENST00000318220 CCDC88BA6NC98 1476 aa18.37■□□□□ 0.53
NBPF3-201ENST00000318220 TONSLQ96HA7 1378 aa18.35■□□□□ 0.53
NBPF3-201ENST00000318220 CARMIL2Q6F5E8 1435 aa18.34■□□□□ 0.53
NBPF3-201ENST00000318220 CEP164Q9UPV0 1460 aa18.33■□□□□ 0.53
NBPF3-201ENST00000318220 TMC1Q8TDI8 760 aa18.33■□□□□ 0.52
NBPF3-201ENST00000318220 FAM69CQ0P6D2 419 aa18.31■□□□□ 0.52
NBPF3-201ENST00000318220 CLSPNQ9HAW4 1339 aa18.3■□□□□ 0.52
NBPF3-201ENST00000318220 EFCAB2Q5VUJ9 269 aa18.28■□□□□ 0.52
NBPF3-201ENST00000318220 CCNB3Q8WWL7 1395 aa18.26■□□□□ 0.51
NBPF3-201ENST00000318220 ANP32CO43423 234 aa18.26■□□□□ 0.51
NBPF3-201ENST00000318220 NPM2Q86SE8 214 aaKnown RBP18.26■□□□□ 0.51
NBPF3-201ENST00000318220 FANCD2Q9BXW9 1451 aa18.25■□□□□ 0.51
NBPF3-201ENST00000318220 ERICH6Q7L0X2 663 aa18.24■□□□□ 0.51
NBPF3-201ENST00000318220 POGKQ9P215 609 aa18.24■□□□□ 0.51
NBPF3-201ENST00000318220 SALL2Q9Y467 1007 aaPredicted RBP18.24■□□□□ 0.51
NBPF3-201ENST00000318220 HIRIP3Q9BW71 556 aaPredicted RBP18.23■□□□□ 0.51
NBPF3-201ENST00000318220 SAFB2Q14151 953 aaKnown RBP eCLIP18.22■□□□□ 0.51
NBPF3-201ENST00000318220 GOLGA3Q08378 1498 aa18.21■□□□□ 0.51
NBPF3-201ENST00000318220 PPM1GO15355 546 aaPredicted RBP18.21■□□□□ 0.51
NBPF3-201ENST00000318220 SOX12O15370 315 aa18.2■□□□□ 0.5
NBPF3-201ENST00000318220 MYO15BQ96JP2 1530 aa18.19■□□□□ 0.5
NBPF3-201ENST00000318220 ARXQ96QS3 562 aa18.19■□□□□ 0.5
NBPF3-201ENST00000318220 KIF3BO15066 747 aa18.19■□□□□ 0.5
NBPF3-201ENST00000318220 EEA1Q15075 1411 aa18.18■□□□□ 0.5
NBPF3-201ENST00000318220 CANXP27824 592 aaKnown RBP18.18■□□□□ 0.5
NBPF3-201ENST00000318220 ZBTB47Q9UFB7 747 aaPredicted RBP18.18■□□□□ 0.5
NBPF3-201ENST00000318220 DIEXFQ68CQ4 756 aaKnown RBP18.17■□□□□ 0.5
NBPF3-201ENST00000318220 ABCC8Q09428 1581 aa18.15■□□□□ 0.5
NBPF3-201ENST00000318220 CEP162Q5TB80 1403 aa18.15■□□□□ 0.5
NBPF3-201ENST00000318220 STK26Q9P289 416 aa18.14■□□□□ 0.49
NBPF3-201ENST00000318220 HNRNPMP52272 730 aaKnown RBP eCLIP18.13■□□□□ 0.49
NBPF3-201ENST00000318220 PTPRGP23470 1445 aa18.12■□□□□ 0.49
NBPF3-201ENST00000318220 HDGFP51858 240 aaKnown RBP18.1■□□□□ 0.49
NBPF3-201ENST00000318220 WIZO95785 1651 aa18.1■□□□□ 0.49
NBPF3-201ENST00000318220 NUTM2DQ5VT03 806 aaPredicted RBP18.1■□□□□ 0.49
NBPF3-201ENST00000318220 NESP48681 1621 aa18.1■□□□□ 0.49
NBPF3-201ENST00000318220 AQRO60306 1485 aaKnown RBP eCLIP18.09■□□□□ 0.49
NBPF3-201ENST00000318220 DDX10Q13206 875 aaKnown RBP18.06■□□□□ 0.48
NBPF3-201ENST00000318220 WASHC2CQ9Y4E1 1318 aa18.05■□□□□ 0.48
NBPF3-201ENST00000318220 DAXXQ9UER7 740 aaPredicted RBP18.05■□□□□ 0.48
NBPF3-201ENST00000318220 NUTM2FA1L443 756 aa18.04■□□□□ 0.48
NBPF3-201ENST00000318220 SPAG9O60271 1321 aaKnown RBP18.04■□□□□ 0.48
NBPF3-201ENST00000318220 KANK1Q14678 1352 aa18.03■□□□□ 0.48
NBPF3-201ENST00000318220 CCDC9Q9Y3X0 531 aaKnown RBP18.03■□□□□ 0.48
NBPF3-201ENST00000318220 RAD54L2Q9Y4B4 1467 aa18.02■□□□□ 0.48
NBPF3-201ENST00000318220 PAK3O75914 559 aaPredicted RBP18■□□□□ 0.47
NBPF3-201ENST00000318220 TNNT2P45379 298 aaPredicted RBP17.99■□□□□ 0.47
NBPF3-201ENST00000318220 FHAD1B1AJZ9 1412 aa17.99■□□□□ 0.47
NBPF3-201ENST00000318220 SENP3-EIF4A1A0A087X0R7 540 aa17.99■□□□□ 0.47
NBPF3-201ENST00000318220 TNIKQ9UKE5 1360 aa17.98■□□□□ 0.47
NBPF3-201ENST00000318220 EID1Q9Y6B2 187 aa17.98■□□□□ 0.47
NBPF3-201ENST00000318220 FAM9BQ8IZU0 186 aa17.98■□□□□ 0.47
NBPF3-201ENST00000318220 DCAF11Q8TEB1 546 aa17.97■□□□□ 0.47
NBPF3-201ENST00000318220 FOXD1Q16676 465 aa17.96■□□□□ 0.47
NBPF3-201ENST00000318220 CARD11Q9BXL7 1154 aa17.96■□□□□ 0.47
NBPF3-201ENST00000318220 NCAPD3P42695 1498 aa17.96■□□□□ 0.47
NBPF3-201ENST00000318220 SRPK2P78362 688 aaKnown RBP17.96■□□□□ 0.47
NBPF3-201ENST00000318220 SMARCA4P51532 1647 aa17.95■□□□□ 0.46
NBPF3-201ENST00000318220 FHOD3Q2V2M9 1422 aa17.95■□□□□ 0.46
NBPF3-201ENST00000318220 KANK4Q5T7N3 995 aaPredicted RBP17.94■□□□□ 0.46
NBPF3-201ENST00000318220 CC2D2AQ9P2K1 1620 aa17.93■□□□□ 0.46
NBPF3-201ENST00000318220 TOP2AP11388 1531 aaKnown RBP17.92■□□□□ 0.46
NBPF3-201ENST00000318220 NPHP1O15259 732 aa17.92■□□□□ 0.46
NBPF3-201ENST00000318220 ZNF316A6NFI3 1004 aaPredicted RBP17.91■□□□□ 0.46
NBPF3-201ENST00000318220 SIN3AQ96ST3 1273 aa17.91■□□□□ 0.46
NBPF3-201ENST00000318220 PKD2Q13563 968 aa17.9■□□□□ 0.46
NBPF3-201ENST00000318220 GAPVD1Q14C86 1478 aa17.9■□□□□ 0.46
NBPF3-201ENST00000318220 WDR43Q15061 677 aaKnown RBP eCLIP17.89■□□□□ 0.45
NBPF3-201ENST00000318220 EIF4G2P78344 907 aaKnown RBP eCLIP17.89■□□□□ 0.45
NBPF3-201ENST00000318220 FGD5Q6ZNL6 1462 aa17.85■□□□□ 0.45
NBPF3-201ENST00000318220 CSB-PGBD3P0DP91 1061 aa17.84■□□□□ 0.45
NBPF3-201ENST00000318220 RAPGEF2Q9Y4G8 1499 aa17.84■□□□□ 0.45
NBPF3-201ENST00000318220 NUP155O75694 1391 aa17.83■□□□□ 0.45
NBPF3-201ENST00000318220 NEUROD2Q15784 382 aa17.83■□□□□ 0.44
NBPF3-201ENST00000318220 FMN1Q68DA7 1419 aa17.82■□□□□ 0.44
NBPF3-201ENST00000318220 KNSTRNQ9Y448 316 aa17.81■□□□□ 0.44
NBPF3-201ENST00000318220 PHF23Q9BUL5 403 aaPredicted RBP17.79■□□□□ 0.44
NBPF3-201ENST00000318220 AFAP1Q8N556 730 aa17.77■□□□□ 0.44
NBPF3-201ENST00000318220 MRS2Q9HD23 443 aa17.76■□□□□ 0.43
NBPF3-201ENST00000318220 CDCA8Q53HL2 280 aa17.76■□□□□ 0.43
NBPF3-201ENST00000318220 HNRNPUQ00839 825 aaKnown RBP eCLIP17.76■□□□□ 0.43
NBPF3-201ENST00000318220 NGDNQ8NEJ9 315 aaKnown RBP17.75■□□□□ 0.43
NBPF3-201ENST00000318220 U2SURPO15042 1029 aaKnown RBP17.75■□□□□ 0.43
NBPF3-201ENST00000318220 IGF1RP08069 1367 aa17.74■□□□□ 0.43
NBPF3-201ENST00000318220 LAS1LQ9Y4W2 734 aaKnown RBP17.74■□□□□ 0.43
NBPF3-201ENST00000318220 RAPGEF3O95398 923 aa17.73■□□□□ 0.43
NBPF3-201ENST00000318220 CFAP53Q96M91 514 aa17.72■□□□□ 0.43
NBPF3-201ENST00000318220 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
NBPF3-201ENST00000318220 PRG4Q92954 1404 aaPredicted RBP17.71■□□□□ 0.43
NBPF3-201ENST00000318220 ZNF330Q9Y3S2 320 aaPredicted RBP17.7■□□□□ 0.42
NBPF3-201ENST00000318220 MRC2Q9UBG0 1479 aa17.7■□□□□ 0.42
NBPF3-201ENST00000318220 ANKRD30AQ9BXX3 1397 aa17.7■□□□□ 0.42
NBPF3-201ENST00000318220 RSPH4AQ5TD94 716 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms