RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 CTTNBP2Q8WZ74 1663 aa30.78■■■□□ 2.52
TTC39C-202ENST00000317571 P3H3Q8IVL6 736 aa30.78■■■□□ 2.52
TTC39C-202ENST00000317571 TDRD9Q8NDG6 1382 aaKnown RBP30.76■■■□□ 2.52
TTC39C-202ENST00000317571 FHOD3Q2V2M9 1422 aa30.76■■■□□ 2.51
TTC39C-202ENST00000317571 DHX57Q6P158 1386 aaKnown RBP30.75■■■□□ 2.51
TTC39C-202ENST00000317571 LRRC9Q6ZRR7 1453 aa30.74■■■□□ 2.51
TTC39C-202ENST00000317571 CFAP43Q8NDM7 1665 aa30.73■■■□□ 2.51
TTC39C-202ENST00000317571 FHAD1B1AJZ9 1412 aa30.72■■■□□ 2.51
TTC39C-202ENST00000317571 ZNF316A6NFI3 1004 aaPredicted RBP30.7■■■□□ 2.51
TTC39C-202ENST00000317571 EFCAB5A4FU69 1503 aa30.7■■■□□ 2.5
TTC39C-202ENST00000317571 GAPVD1Q14C86 1478 aa30.68■■■□□ 2.5
TTC39C-202ENST00000317571 TARBP1Q13395 1621 aaKnown RBP30.65■■■□□ 2.5
TTC39C-202ENST00000317571 PHLDB1Q86UU1 1377 aa30.64■■■□□ 2.5
TTC39C-202ENST00000317571 FYCO1Q9BQS8 1478 aa30.6■■■□□ 2.49
TTC39C-202ENST00000317571 ITGAEP38570 1179 aa30.58■■■□□ 2.49
TTC39C-202ENST00000317571 CASKIN1Q8WXD9 1431 aa30.57■■■□□ 2.48
TTC39C-202ENST00000317571 CLSPNQ9HAW4 1339 aa30.57■■■□□ 2.48
TTC39C-202ENST00000317571 AQRO60306 1485 aaKnown RBP eCLIP30.56■■■□□ 2.48
TTC39C-202ENST00000317571 SCAF1Q9H7N4 1312 aaKnown RBP30.55■■■□□ 2.48
TTC39C-202ENST00000317571 SAMD9Q5K651 1589 aa30.54■■■□□ 2.48
TTC39C-202ENST00000317571 SNAPC4Q5SXM2 1469 aa30.52■■■□□ 2.48
TTC39C-202ENST00000317571 ATP1B4Q9UN42 357 aaPredicted RBP30.52■■■□□ 2.48
TTC39C-202ENST00000317571 LRRIQ1Q96JM4 1722 aa30.45■■■□□ 2.47
TTC39C-202ENST00000317571 RAB3GAP2Q9H2M9 1393 aa30.45■■■□□ 2.47
TTC39C-202ENST00000317571 PBRM1Q86U86 1689 aa30.45■■■□□ 2.46
TTC39C-202ENST00000317571 FMN1Q68DA7 1419 aa30.45■■■□□ 2.46
TTC39C-202ENST00000317571 MRC2Q9UBG0 1479 aa30.41■■■□□ 2.46
TTC39C-202ENST00000317571 MAPKBP1O60336 1514 aa30.36■■■□□ 2.45
TTC39C-202ENST00000317571 FAM50AQ14320 339 aaKnown RBP30.36■■■□□ 2.45
TTC39C-202ENST00000317571 GRIN2BQ13224 1484 aa30.34■■■□□ 2.45
TTC39C-202ENST00000317571 SETD5Q9C0A6 1442 aa30.33■■■□□ 2.45
TTC39C-202ENST00000317571 ADAMTS12P58397 1594 aa30.33■■■□□ 2.45
TTC39C-202ENST00000317571 NEUROD1Q13562 356 aa30.31■■■□□ 2.44
TTC39C-202ENST00000317571 ACIN1Q9UKV3 1341 aaKnown RBP30.28■■■□□ 2.44
TTC39C-202ENST00000317571 ZNF608Q9ULD9 1512 aaPredicted RBP30.25■■■□□ 2.43
TTC39C-202ENST00000317571 MIER1Q8N108 512 aa30.24■■■□□ 2.43
TTC39C-202ENST00000317571 FGD6Q6ZV73 1430 aa30.23■■■□□ 2.43
TTC39C-202ENST00000317571 THOC2Q8NI27 1593 aaKnown RBP30.23■■■□□ 2.43
TTC39C-202ENST00000317571 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.23■■■□□ 2.43
TTC39C-202ENST00000317571 WDR62O43379 1518 aa30.23■■■□□ 2.43
TTC39C-202ENST00000317571 MTUS2Q5JR59 1369 aa30.21■■■□□ 2.43
TTC39C-202ENST00000317571 IQGAP2Q13576 1575 aa30.21■■■□□ 2.43
TTC39C-202ENST00000317571 MAGI3Q5TCQ9 1506 aa30.18■■■□□ 2.42
TTC39C-202ENST00000317571 IFT140Q96RY7 1462 aa30.16■■■□□ 2.42
TTC39C-202ENST00000317571 NCOA2Q15596 1464 aa30.16■■■□□ 2.42
TTC39C-202ENST00000317571 PTPRKQ15262 1439 aa30.12■■■□□ 2.41
TTC39C-202ENST00000317571 EHBP1L1Q8N3D4 1523 aa30.12■■■□□ 2.41
TTC39C-202ENST00000317571 SUPT6HQ7KZ85 1726 aaKnown RBP30.1■■■□□ 2.41
TTC39C-202ENST00000317571 MYOM3Q5VTT5 1437 aa30.08■■■□□ 2.41
TTC39C-202ENST00000317571 ARHGEF11O15085 1522 aa30.08■■■□□ 2.41
TTC39C-202ENST00000317571 UGGT2Q9NYU1 1516 aa30.06■■■□□ 2.4
TTC39C-202ENST00000317571 CENPBP07199 599 aaPredicted RBP30.06■■■□□ 2.4
TTC39C-202ENST00000317571 HECW1Q76N89 1606 aa30.05■■■□□ 2.4
TTC39C-202ENST00000317571 EIF4G3O43432 1585 aaKnown RBP30.04■■■□□ 2.4
TTC39C-202ENST00000317571 CCDC18Q5T9S5 1454 aa30.04■■■□□ 2.4
TTC39C-202ENST00000317571 SIN3AQ96ST3 1273 aa30.03■■■□□ 2.4
TTC39C-202ENST00000317571 EPRSP07814 1512 aaKnown RBP30.01■■■□□ 2.39
TTC39C-202ENST00000317571 CDK13Q14004 1512 aaKnown RBP29.99■■■□□ 2.39
TTC39C-202ENST00000317571 YTHDC1Q96MU7 727 aaKnown RBP29.98■■■□□ 2.39
TTC39C-202ENST00000317571 PTPN23Q9H3S7 1636 aa29.98■■■□□ 2.39
TTC39C-202ENST00000317571 HFM1A2PYH4 1435 aa29.96■■■□□ 2.39
TTC39C-202ENST00000317571 DISP1Q96F81 1524 aa29.94■■■□□ 2.38
TTC39C-202ENST00000317571 KIAA0586Q9BVV6 1533 aa29.94■■■□□ 2.38
TTC39C-202ENST00000317571 PELP1Q8IZL8 1130 aaKnown RBP29.93■■■□□ 2.38
TTC39C-202ENST00000317571 GRIN2AQ12879 1464 aa29.93■■■□□ 2.38
TTC39C-202ENST00000317571 ERCC6Q03468 1493 aa29.93■■■□□ 2.38
TTC39C-202ENST00000317571 KIAA0556O60303 1618 aa29.92■■■□□ 2.38
TTC39C-202ENST00000317571 NAIPQ13075 1403 aa29.91■■■□□ 2.38
TTC39C-202ENST00000317571 ARID3CA6NKF2 412 aa29.88■■■□□ 2.37
TTC39C-202ENST00000317571 GTF3C3Q9Y5Q9 886 aa29.88■■■□□ 2.37
TTC39C-202ENST00000317571 TCOF1Q13428 1488 aaKnown RBP29.87■■■□□ 2.37
TTC39C-202ENST00000317571 UACAQ9BZF9 1416 aa29.82■■■□□ 2.36
TTC39C-202ENST00000317571 CEP170Q5SW79 1584 aa29.8■■■□□ 2.36
TTC39C-202ENST00000317571 NUP153P49790 1475 aaKnown RBP29.79■■■□□ 2.36
TTC39C-202ENST00000317571 MAGI1Q96QZ7 1491 aaPredicted RBP29.79■■■□□ 2.36
TTC39C-202ENST00000317571 RAPGEF6Q8TEU7 1601 aa29.75■■■□□ 2.35
TTC39C-202ENST00000317571 GCC2Q8IWJ2 1684 aa29.74■■■□□ 2.35
TTC39C-202ENST00000317571 TIMELESSQ9UNS1 1208 aa29.73■■■□□ 2.35
TTC39C-202ENST00000317571 SYNJ2O15056 1496 aa29.73■■■□□ 2.35
TTC39C-202ENST00000317571 MIA2Q96PC5 1412 aa29.72■■■□□ 2.35
TTC39C-202ENST00000317571 KDM6BO15054 1643 aa29.72■■■□□ 2.35
TTC39C-202ENST00000317571 RRP7BPQ9NSQ0 103 aa29.71■■■□□ 2.35
TTC39C-202ENST00000317571 CHIC2Q9UKJ5 165 aa29.71■■■□□ 2.35
TTC39C-202ENST00000317571 PPP1R15AO75807 674 aaPredicted RBP29.7■■■□□ 2.35
TTC39C-202ENST00000317571 DENND4BO75064 1496 aaPredicted RBP29.66■■■□□ 2.34
TTC39C-202ENST00000317571 CHMP7Q8WUX9 453 aaPredicted RBP29.66■■■□□ 2.34
TTC39C-202ENST00000317571 AKNAQ7Z591 1439 aa29.64■■■□□ 2.34
TTC39C-202ENST00000317571 NUP160Q12769 1436 aa29.62■■■□□ 2.33
TTC39C-202ENST00000317571 PLB1Q6P1J6 1458 aa29.61■■■□□ 2.33
TTC39C-202ENST00000317571 KDM5BQ9UGL1 1544 aa29.6■■■□□ 2.33
TTC39C-202ENST00000317571 FBLN2P98095 1184 aa29.6■■■□□ 2.33
TTC39C-202ENST00000317571 TONSLQ96HA7 1378 aa29.58■■■□□ 2.33
TTC39C-202ENST00000317571 ZNF644Q9H582 1327 aaPredicted RBP29.56■■■□□ 2.32
TTC39C-202ENST00000317571 PRG4Q92954 1404 aaPredicted RBP29.55■■■□□ 2.32
TTC39C-202ENST00000317571 HIRIP3Q9BW71 556 aaPredicted RBP29.55■■■□□ 2.32
TTC39C-202ENST00000317571 DAPK1P53355 1430 aa29.55■■■□□ 2.32
TTC39C-202ENST00000317571 DNMT1P26358 1616 aaKnown RBP29.54■■■□□ 2.32
TTC39C-202ENST00000317571 ABCC5O15440 1437 aa29.52■■■□□ 2.32
TTC39C-202ENST00000317571 JPH4Q96JJ6 628 aa29.5■■■□□ 2.31
TTC39C-202ENST00000317571 TROQ12816 1431 aaPredicted RBP29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms