RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 IGF1RP08069 1367 aa22.95■■□□□ 1.26
MSRA-201ENST00000317173 PRXQ9BXM0 1461 aa22.93■■□□□ 1.26
MSRA-201ENST00000317173 CYB5RLQ6IPT4 315 aa22.92■■□□□ 1.26
MSRA-201ENST00000317173 GOLGA3Q08378 1498 aa22.9■■□□□ 1.26
MSRA-201ENST00000317173 LOC105371045A0A1W2PR82 267 aa22.84■■□□□ 1.25
MSRA-201ENST00000317173 CARMIL1Q5VZK9 1371 aa22.84■■□□□ 1.25
MSRA-201ENST00000317173 SHROOM2Q13796 1616 aa22.83■■□□□ 1.25
MSRA-201ENST00000317173 RAPGEF2Q9Y4G8 1499 aa22.82■■□□□ 1.24
MSRA-201ENST00000317173 TNIKQ9UKE5 1360 aa22.75■■□□□ 1.23
MSRA-201ENST00000317173 ERCC6L2Q5T890 1561 aa22.74■■□□□ 1.23
MSRA-201ENST00000317173 JPH4Q96JJ6 628 aa22.73■■□□□ 1.23
MSRA-201ENST00000317173 KIAA0586Q9BVV6 1533 aa22.73■■□□□ 1.23
MSRA-201ENST00000317173 PRG4Q92954 1404 aaPredicted RBP22.72■■□□□ 1.23
MSRA-201ENST00000317173 UBTFP17480 764 aaKnown RBP22.7■■□□□ 1.22
MSRA-201ENST00000317173 EHMT2Q96KQ7 1210 aa22.68■■□□□ 1.22
MSRA-201ENST00000317173 CTTNBP2Q8WZ74 1663 aa22.63■■□□□ 1.21
MSRA-201ENST00000317173 IQGAP2Q13576 1575 aa22.58■■□□□ 1.2
MSRA-201ENST00000317173 CEP162Q5TB80 1403 aa22.56■■□□□ 1.2
MSRA-201ENST00000317173 TRHP20396 242 aaPredicted RBP22.53■■□□□ 1.2
MSRA-201ENST00000317173 CARMIL2Q6F5E8 1435 aa22.52■■□□□ 1.2
MSRA-201ENST00000317173 CLIP1P30622 1438 aa22.47■■□□□ 1.19
MSRA-201ENST00000317173 UGGT2Q9NYU1 1516 aa22.45■■□□□ 1.18
MSRA-201ENST00000317173 PTPRGP23470 1445 aa22.43■■□□□ 1.18
MSRA-201ENST00000317173 EFCAB5A4FU69 1503 aa22.42■■□□□ 1.18
MSRA-201ENST00000317173 DISP1Q96F81 1524 aa22.41■■□□□ 1.18
MSRA-201ENST00000317173 ADCY10Q96PN6 1610 aa22.38■■□□□ 1.17
MSRA-201ENST00000317173 NPM1P06748 294 aaKnown RBP eCLIP22.38■■□□□ 1.17
MSRA-201ENST00000317173 KIAA0556O60303 1618 aa22.36■■□□□ 1.17
MSRA-201ENST00000317173 ARHGAP35Q9NRY4 1499 aa22.35■■□□□ 1.17
MSRA-201ENST00000317173 SAMD9Q5K651 1589 aa22.35■■□□□ 1.17
MSRA-201ENST00000317173 MAPKBP1O60336 1514 aa22.32■■□□□ 1.16
MSRA-201ENST00000317173 TTBK1Q5TCY1 1321 aaPredicted RBP22.3■■□□□ 1.16
MSRA-201ENST00000317173 RANGAP1P46060 587 aaPredicted RBP22.29■■□□□ 1.16
MSRA-201ENST00000317173 UHRF1BP1LA0JNW5 1464 aa22.29■■□□□ 1.16
MSRA-201ENST00000317173 UACAQ9BZF9 1416 aa22.28■■□□□ 1.16
MSRA-201ENST00000317173 ABCC2Q92887 1545 aa22.26■■□□□ 1.15
MSRA-201ENST00000317173 VPS8Q8N3P4 1428 aa22.26■■□□□ 1.15
MSRA-201ENST00000317173 ABCC10Q5T3U5 1492 aa22.22■■□□□ 1.15
MSRA-201ENST00000317173 KIF13AQ9H1H9 1805 aa22.2■■□□□ 1.14
MSRA-201ENST00000317173 FHOD3Q2V2M9 1422 aa22.18■■□□□ 1.14
MSRA-201ENST00000317173 DIP2BQ9P265 1576 aa22.17■■□□□ 1.14
MSRA-201ENST00000317173 KDM5BQ9UGL1 1544 aa22.17■■□□□ 1.14
MSRA-201ENST00000317173 FMN1Q68DA7 1419 aa22.17■■□□□ 1.14
MSRA-201ENST00000317173 FAM69CQ0P6D2 419 aa22.16■■□□□ 1.14
MSRA-201ENST00000317173 PLB1Q6P1J6 1458 aa22.14■■□□□ 1.14
MSRA-201ENST00000317173 ASXL2Q76L83 1435 aa22.12■■□□□ 1.13
MSRA-201ENST00000317173 ABCA8O94911 1581 aa22.12■■□□□ 1.13
MSRA-201ENST00000317173 P3H3Q8IVL6 736 aa22.11■■□□□ 1.13
MSRA-201ENST00000317173 ZCCHC11Q5TAX3 1644 aaKnown RBP22.09■■□□□ 1.13
MSRA-201ENST00000317173 FYCO1Q9BQS8 1478 aa22.07■■□□□ 1.12
MSRA-201ENST00000317173 PCF11O94913 1555 aaKnown RBP22.07■■□□□ 1.12
MSRA-201ENST00000317173 CASKIN1Q8WXD9 1431 aa22.06■■□□□ 1.12
MSRA-201ENST00000317173 GLI2P10070 1586 aa22.04■■□□□ 1.12
MSRA-201ENST00000317173 MAP3K1Q13233 1512 aa22.01■■□□□ 1.11
MSRA-201ENST00000317173 WDR7Q9Y4E6 1490 aa22■■□□□ 1.11
MSRA-201ENST00000317173 EPRSP07814 1512 aaKnown RBP22■■□□□ 1.11
MSRA-201ENST00000317173 HECW1Q76N89 1606 aa22■■□□□ 1.11
MSRA-201ENST00000317173 APLP2Q06481 763 aa21.99■■□□□ 1.11
MSRA-201ENST00000317173 RAPGEF6Q8TEU7 1601 aa21.98■■□□□ 1.11
MSRA-201ENST00000317173 CFAP43Q8NDM7 1665 aa21.96■■□□□ 1.11
MSRA-201ENST00000317173 TIAM1Q13009 1591 aa21.94■■□□□ 1.1
MSRA-201ENST00000317173 TSPOAP1O95153 1857 aa21.94■■□□□ 1.1
MSRA-201ENST00000317173 ATP10BO94823 1461 aa21.93■■□□□ 1.1
MSRA-201ENST00000317173 CCDC18Q5T9S5 1454 aa21.93■■□□□ 1.1
MSRA-201ENST00000317173 LRRIQ1Q96JM4 1722 aa21.91■■□□□ 1.1
MSRA-201ENST00000317173 MAP3K4Q9Y6R4 1608 aa21.91■■□□□ 1.1
MSRA-201ENST00000317173 NUP153P49790 1475 aaKnown RBP21.88■■□□□ 1.09
MSRA-201ENST00000317173 PPRC1Q5VV67 1664 aaKnown RBP21.87■■□□□ 1.09
MSRA-201ENST00000317173 ARID3CA6NKF2 412 aa21.87■■□□□ 1.09
MSRA-201ENST00000317173 TEX14Q8IWB6 1497 aa21.87■■□□□ 1.09
MSRA-201ENST00000317173 KDM6BO15054 1643 aa21.86■■□□□ 1.09
MSRA-201ENST00000317173 ATP1B4Q9UN42 357 aaPredicted RBP21.85■■□□□ 1.09
MSRA-201ENST00000317173 KCNH8Q96L42 1107 aa21.84■■□□□ 1.09
MSRA-201ENST00000317173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.82■■□□□ 1.08
MSRA-201ENST00000317173 HNRNPUL2Q1KMD3 747 aaKnown RBP21.82■■□□□ 1.08
MSRA-201ENST00000317173 LRRC9Q6ZRR7 1453 aa21.81■■□□□ 1.08
MSRA-201ENST00000317173 CD109Q6YHK3 1445 aa21.81■■□□□ 1.08
MSRA-201ENST00000317173 MAGI3Q5TCQ9 1506 aa21.8■■□□□ 1.08
MSRA-201ENST00000317173 CDK13Q14004 1512 aaKnown RBP21.77■■□□□ 1.08
MSRA-201ENST00000317173 EHBP1L1Q8N3D4 1523 aa21.76■■□□□ 1.07
MSRA-201ENST00000317173 PLEKHD1A6NEE1 506 aa21.75■■□□□ 1.07
MSRA-201ENST00000317173 KANK4Q5T7N3 995 aaPredicted RBP21.75■■□□□ 1.07
MSRA-201ENST00000317173 ABCA9Q8IUA7 1624 aa21.75■■□□□ 1.07
MSRA-201ENST00000317173 PPARGC1BQ86YN6 1023 aaKnown RBP21.73■■□□□ 1.07
MSRA-201ENST00000317173 MTUS2Q5JR59 1369 aa21.72■■□□□ 1.07
MSRA-201ENST00000317173 CDK11AQ9UQ88 783 aaPredicted RBP21.71■■□□□ 1.07
MSRA-201ENST00000317173 SUPT6HQ7KZ85 1726 aaKnown RBP21.7■■□□□ 1.06
MSRA-201ENST00000317173 TRIM26Q12899 539 aaPredicted RBP21.67■■□□□ 1.06
MSRA-201ENST00000317173 COL17A1Q9UMD9 1497 aaPredicted RBP21.67■■□□□ 1.06
MSRA-201ENST00000317173 PHLDB1Q86UU1 1377 aa21.65■■□□□ 1.06
MSRA-201ENST00000317173 TROQ12816 1431 aaPredicted RBP21.64■■□□□ 1.05
MSRA-201ENST00000317173 NEO1Q92859 1461 aa21.62■■□□□ 1.05
MSRA-201ENST00000317173 ARAP3Q8WWN8 1544 aa21.61■■□□□ 1.05
MSRA-201ENST00000317173 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.6■■□□□ 1.05
MSRA-201ENST00000317173 NCOA2Q15596 1464 aa21.59■■□□□ 1.05
MSRA-201ENST00000317173 KIF14Q15058 1648 aa21.57■■□□□ 1.04
MSRA-201ENST00000317173 TTC37Q6PGP7 1564 aa21.56■■□□□ 1.04
MSRA-201ENST00000317173 AEBP2Q6ZN18 517 aaPredicted RBP21.55■■□□□ 1.04
MSRA-201ENST00000317173 RRBP1Q9P2E9 1410 aaKnown RBP21.54■■□□□ 1.04
MSRA-201ENST00000317173 CFAP74Q9C0B2 1584 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms