RNA–Protein interactions for RNA: ENST00000316738.11

EFCAB11-201, Transcript of EF-hand calcium binding domain 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EFCAB11, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-201ENST00000316738 ADAMTS12P58397 1594 aa16.9■□□□□ 0.3
EFCAB11-201ENST00000316738 ZEB1P37275 1124 aaPredicted RBP16.89■□□□□ 0.29
EFCAB11-201ENST00000316738 SAMD9Q5K651 1589 aa16.89■□□□□ 0.29
EFCAB11-201ENST00000316738 TTBK1Q5TCY1 1321 aaPredicted RBP16.89■□□□□ 0.29
EFCAB11-201ENST00000316738 APLP2Q06481 763 aa16.88■□□□□ 0.29
EFCAB11-201ENST00000316738 AQRO60306 1485 aaKnown RBP eCLIP16.88■□□□□ 0.29
EFCAB11-201ENST00000316738 FHAD1B1AJZ9 1412 aa16.87■□□□□ 0.29
EFCAB11-201ENST00000316738 GRIN2BQ13224 1484 aa16.87■□□□□ 0.29
EFCAB11-201ENST00000316738 TIAM1Q13009 1591 aa16.86■□□□□ 0.29
EFCAB11-201ENST00000316738 ZNF608Q9ULD9 1512 aaPredicted RBP16.85■□□□□ 0.29
EFCAB11-201ENST00000316738 KANK4Q5T7N3 995 aaPredicted RBP16.84■□□□□ 0.29
EFCAB11-201ENST00000316738 ERCC6Q03468 1493 aa16.84■□□□□ 0.29
EFCAB11-201ENST00000316738 CFAP43Q8NDM7 1665 aa16.84■□□□□ 0.29
EFCAB11-201ENST00000316738 PCF11O94913 1555 aaKnown RBP16.83■□□□□ 0.29
EFCAB11-201ENST00000316738 EIF4G3O43432 1585 aaKnown RBP16.82■□□□□ 0.28
EFCAB11-201ENST00000316738 FYCO1Q9BQS8 1478 aa16.8■□□□□ 0.28
EFCAB11-201ENST00000316738 FHOD3Q2V2M9 1422 aa16.79■□□□□ 0.28
EFCAB11-201ENST00000316738 RRBP1Q9P2E9 1410 aaKnown RBP16.79■□□□□ 0.28
EFCAB11-201ENST00000316738 CASKIN1Q8WXD9 1431 aa16.79■□□□□ 0.28
EFCAB11-201ENST00000316738 SNAPC4Q5SXM2 1469 aa16.77■□□□□ 0.28
EFCAB11-201ENST00000316738 LRRC9Q6ZRR7 1453 aa16.76■□□□□ 0.27
EFCAB11-201ENST00000316738 FMN1Q68DA7 1419 aa16.75■□□□□ 0.27
EFCAB11-201ENST00000316738 IQGAP2Q13576 1575 aa16.75■□□□□ 0.27
EFCAB11-201ENST00000316738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.73■□□□□ 0.27
EFCAB11-201ENST00000316738 LRRIQ1Q96JM4 1722 aa16.72■□□□□ 0.27
EFCAB11-201ENST00000316738 MAGI1Q96QZ7 1491 aaPredicted RBP16.71■□□□□ 0.27
EFCAB11-201ENST00000316738 P3H3Q8IVL6 736 aa16.71■□□□□ 0.26
EFCAB11-201ENST00000316738 UGGT2Q9NYU1 1516 aa16.71■□□□□ 0.26
EFCAB11-201ENST00000316738 GRIN2AQ12879 1464 aa16.69■□□□□ 0.26
EFCAB11-201ENST00000316738 KIAA0586Q9BVV6 1533 aa16.66■□□□□ 0.26
EFCAB11-201ENST00000316738 CCER1Q8TC90 406 aaPredicted RBP16.66■□□□□ 0.26
EFCAB11-201ENST00000316738 CCNB3Q8WWL7 1395 aa16.65■□□□□ 0.26
EFCAB11-201ENST00000316738 SYNJ2O15056 1496 aa16.64■□□□□ 0.25
EFCAB11-201ENST00000316738 HNRNPUL2Q1KMD3 747 aaKnown RBP16.63■□□□□ 0.25
EFCAB11-201ENST00000316738 PHLDB1Q86UU1 1377 aa16.61■□□□□ 0.25
EFCAB11-201ENST00000316738 CEP170Q5SW79 1584 aa16.61■□□□□ 0.25
EFCAB11-201ENST00000316738 DISP1Q96F81 1524 aa16.61■□□□□ 0.25
EFCAB11-201ENST00000316738 KIAA0556O60303 1618 aa16.6■□□□□ 0.25
EFCAB11-201ENST00000316738 NUP160Q12769 1436 aa16.58■□□□□ 0.24
EFCAB11-201ENST00000316738 HECW1Q76N89 1606 aa16.57■□□□□ 0.24
EFCAB11-201ENST00000316738 CCDC18Q5T9S5 1454 aa16.56■□□□□ 0.24
EFCAB11-201ENST00000316738 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.56■□□□□ 0.24
EFCAB11-201ENST00000316738 ARHGEF11O15085 1522 aa16.54■□□□□ 0.24
EFCAB11-201ENST00000316738 EHBP1L1Q8N3D4 1523 aa16.53■□□□□ 0.24
EFCAB11-201ENST00000316738 MAGI3Q5TCQ9 1506 aa16.53■□□□□ 0.24
EFCAB11-201ENST00000316738 SUPT6HQ7KZ85 1726 aaKnown RBP16.51■□□□□ 0.23
EFCAB11-201ENST00000316738 EPRSP07814 1512 aaKnown RBP16.5■□□□□ 0.23
EFCAB11-201ENST00000316738 ATP1B4Q9UN42 357 aaPredicted RBP16.49■□□□□ 0.23
EFCAB11-201ENST00000316738 CHMP7Q8WUX9 453 aaPredicted RBP16.49■□□□□ 0.23
EFCAB11-201ENST00000316738 NCOA2Q15596 1464 aa16.47■□□□□ 0.23
EFCAB11-201ENST00000316738 MTUS2Q5JR59 1369 aa16.47■□□□□ 0.23
EFCAB11-201ENST00000316738 DHX57Q6P158 1386 aaKnown RBP16.47■□□□□ 0.23
EFCAB11-201ENST00000316738 FGD6Q6ZV73 1430 aa16.46■□□□□ 0.23
EFCAB11-201ENST00000316738 RAPGEF6Q8TEU7 1601 aa16.46■□□□□ 0.23
EFCAB11-201ENST00000316738 CLSPNQ9HAW4 1339 aa16.46■□□□□ 0.23
EFCAB11-201ENST00000316738 NUP153P49790 1475 aaKnown RBP16.43■□□□□ 0.22
EFCAB11-201ENST00000316738 CDK13Q14004 1512 aaKnown RBP16.43■□□□□ 0.22
EFCAB11-201ENST00000316738 MYOM3Q5VTT5 1437 aa16.43■□□□□ 0.22
EFCAB11-201ENST00000316738 CHD1O14646 1710 aa16.41■□□□□ 0.22
EFCAB11-201ENST00000316738 TCOF1Q13428 1488 aaKnown RBP16.39■□□□□ 0.21
EFCAB11-201ENST00000316738 SETD5Q9C0A6 1442 aa16.39■□□□□ 0.21
EFCAB11-201ENST00000316738 RAB3GAP2Q9H2M9 1393 aa16.38■□□□□ 0.21
EFCAB11-201ENST00000316738 PTPN23Q9H3S7 1636 aa16.38■□□□□ 0.21
EFCAB11-201ENST00000316738 JPH4Q96JJ6 628 aa16.38■□□□□ 0.21
EFCAB11-201ENST00000316738 CARMIL2Q6F5E8 1435 aa16.38■□□□□ 0.21
EFCAB11-201ENST00000316738 SHROOM2Q13796 1616 aa16.36■□□□□ 0.21
EFCAB11-201ENST00000316738 ABCA8O94911 1581 aa16.35■□□□□ 0.21
EFCAB11-201ENST00000316738 FBLN2P98095 1184 aa16.35■□□□□ 0.21
EFCAB11-201ENST00000316738 FAM50AQ14320 339 aaKnown RBP16.35■□□□□ 0.21
EFCAB11-201ENST00000316738 PTPRKQ15262 1439 aa16.34■□□□□ 0.21
EFCAB11-201ENST00000316738 MIA2Q96PC5 1412 aa16.33■□□□□ 0.21
EFCAB11-201ENST00000316738 PLB1Q6P1J6 1458 aa16.33■□□□□ 0.21
EFCAB11-201ENST00000316738 ITGAEP38570 1179 aa16.33■□□□□ 0.2
EFCAB11-201ENST00000316738 ADCY10Q96PN6 1610 aa16.33■□□□□ 0.2
EFCAB11-201ENST00000316738 MAPKBP1O60336 1514 aa16.32■□□□□ 0.2
EFCAB11-201ENST00000316738 HFM1A2PYH4 1435 aa16.29■□□□□ 0.2
EFCAB11-201ENST00000316738 TROQ12816 1431 aaPredicted RBP16.26■□□□□ 0.19
EFCAB11-201ENST00000316738 PRG4Q92954 1404 aaPredicted RBP16.26■□□□□ 0.19
EFCAB11-201ENST00000316738 GCC2Q8IWJ2 1684 aa16.24■□□□□ 0.19
EFCAB11-201ENST00000316738 NAIPQ13075 1403 aa16.24■□□□□ 0.19
EFCAB11-201ENST00000316738 AKNAQ7Z591 1439 aa16.24■□□□□ 0.19
EFCAB11-201ENST00000316738 CLASP1Q7Z460 1538 aa16.24■□□□□ 0.19
EFCAB11-201ENST00000316738 ATP10BO94823 1461 aa16.22■□□□□ 0.19
EFCAB11-201ENST00000316738 CDK11AQ9UQ88 783 aaPredicted RBP16.22■□□□□ 0.19
EFCAB11-201ENST00000316738 KIF14Q15058 1648 aa16.22■□□□□ 0.19
EFCAB11-201ENST00000316738 ITSN2Q9NZM3 1697 aa16.22■□□□□ 0.19
EFCAB11-201ENST00000316738 DNMT1P26358 1616 aaKnown RBP16.2■□□□□ 0.18
EFCAB11-201ENST00000316738 ARID3CA6NKF2 412 aa16.2■□□□□ 0.18
EFCAB11-201ENST00000316738 PTPRGP23470 1445 aa16.18■□□□□ 0.18
EFCAB11-201ENST00000316738 GPATCH8Q9UKJ3 1502 aaKnown RBP16.18■□□□□ 0.18
EFCAB11-201ENST00000316738 ZNF316A6NFI3 1004 aaPredicted RBP16.17■□□□□ 0.18
EFCAB11-201ENST00000316738 ABCC10Q5T3U5 1492 aa16.17■□□□□ 0.18
EFCAB11-201ENST00000316738 ERCC6L2Q5T890 1561 aa16.17■□□□□ 0.18
EFCAB11-201ENST00000316738 UACAQ9BZF9 1416 aa16.16■□□□□ 0.18
EFCAB11-201ENST00000316738 DAPK1P53355 1430 aa16.15■□□□□ 0.18
EFCAB11-201ENST00000316738 CDC42BPAQ5VT25 1732 aa16.15■□□□□ 0.18
EFCAB11-201ENST00000316738 ROCK1Q13464 1354 aa16.14■□□□□ 0.17
EFCAB11-201ENST00000316738 ABCC5O15440 1437 aa16.14■□□□□ 0.17
EFCAB11-201ENST00000316738 CROCC2H7BZ55 1655 aa16.12■□□□□ 0.17
EFCAB11-201ENST00000316738 KDM6BO15054 1643 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms