RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 KIF27Q86VH2 1401 aa30.57■■■□□ 2.48
EXOSC4-201ENST00000316052 KIAA0586Q9BVV6 1533 aa30.47■■■□□ 2.47
EXOSC4-201ENST00000316052 CUL7Q14999 1698 aa30.46■■■□□ 2.47
EXOSC4-201ENST00000316052 KIF13AQ9H1H9 1805 aa30.42■■■□□ 2.46
EXOSC4-201ENST00000316052 CARMIL1Q5VZK9 1371 aa30.41■■■□□ 2.46
EXOSC4-201ENST00000316052 NPM1P06748 294 aaKnown RBP eCLIP30.34■■■□□ 2.45
EXOSC4-201ENST00000316052 ADCY10Q96PN6 1610 aa30.33■■■□□ 2.45
EXOSC4-201ENST00000316052 FAM69CQ0P6D2 419 aa30.29■■■□□ 2.44
EXOSC4-201ENST00000316052 ABCC10Q5T3U5 1492 aa30.27■■■□□ 2.44
EXOSC4-201ENST00000316052 MAPKBP1O60336 1514 aa30.27■■■□□ 2.44
EXOSC4-201ENST00000316052 AEBP2Q6ZN18 517 aaPredicted RBP30.25■■■□□ 2.43
EXOSC4-201ENST00000316052 PTPRGP23470 1445 aa30.22■■■□□ 2.43
EXOSC4-201ENST00000316052 TTBK1Q5TCY1 1321 aaPredicted RBP30.2■■■□□ 2.42
EXOSC4-201ENST00000316052 DIP2BQ9P265 1576 aa30.17■■■□□ 2.42
EXOSC4-201ENST00000316052 IQGAP2Q13576 1575 aa30.15■■■□□ 2.42
EXOSC4-201ENST00000316052 TNIKQ9UKE5 1360 aa30.15■■■□□ 2.42
EXOSC4-201ENST00000316052 CARMIL2Q6F5E8 1435 aa30.14■■■□□ 2.42
EXOSC4-201ENST00000316052 RAPGEF2Q9Y4G8 1499 aa30.09■■■□□ 2.41
EXOSC4-201ENST00000316052 DISP1Q96F81 1524 aa30.06■■■□□ 2.4
EXOSC4-201ENST00000316052 ABCC2Q92887 1545 aa30.03■■■□□ 2.4
EXOSC4-201ENST00000316052 TSPOAP1O95153 1857 aa30.02■■■□□ 2.4
EXOSC4-201ENST00000316052 UGGT2Q9NYU1 1516 aa29.98■■■□□ 2.39
EXOSC4-201ENST00000316052 UACAQ9BZF9 1416 aa29.97■■■□□ 2.39
EXOSC4-201ENST00000316052 UHRF1BP1LA0JNW5 1464 aa29.97■■■□□ 2.39
EXOSC4-201ENST00000316052 ASXL2Q76L83 1435 aa29.96■■■□□ 2.39
EXOSC4-201ENST00000316052 PLB1Q6P1J6 1458 aa29.91■■■□□ 2.38
EXOSC4-201ENST00000316052 KDM6BO15054 1643 aa29.9■■■□□ 2.38
EXOSC4-201ENST00000316052 KIAA0556O60303 1618 aa29.89■■■□□ 2.37
EXOSC4-201ENST00000316052 KDM5BQ9UGL1 1544 aa29.85■■■□□ 2.37
EXOSC4-201ENST00000316052 GLI2P10070 1586 aa29.84■■■□□ 2.37
EXOSC4-201ENST00000316052 CTTNBP2Q8WZ74 1663 aa29.81■■■□□ 2.36
EXOSC4-201ENST00000316052 PPRC1Q5VV67 1664 aaKnown RBP29.8■■■□□ 2.36
EXOSC4-201ENST00000316052 PRXQ9BXM0 1461 aa29.8■■■□□ 2.36
EXOSC4-201ENST00000316052 ZCCHC11Q5TAX3 1644 aaKnown RBP29.78■■■□□ 2.36
EXOSC4-201ENST00000316052 EPRSP07814 1512 aaKnown RBP29.76■■■□□ 2.36
EXOSC4-201ENST00000316052 KDM4FA0A1W2PPD8 638 aa29.72■■■□□ 2.35
EXOSC4-201ENST00000316052 GOLGA3Q08378 1498 aa29.71■■■□□ 2.35
EXOSC4-201ENST00000316052 MAP3K4Q9Y6R4 1608 aa29.67■■■□□ 2.34
EXOSC4-201ENST00000316052 COL17A1Q9UMD9 1497 aaPredicted RBP29.66■■■□□ 2.34
EXOSC4-201ENST00000316052 ABCA8O94911 1581 aa29.64■■■□□ 2.33
EXOSC4-201ENST00000316052 WDR7Q9Y4E6 1490 aa29.63■■■□□ 2.33
EXOSC4-201ENST00000316052 CSRNP3Q8WYN3 585 aa29.6■■■□□ 2.33
EXOSC4-201ENST00000316052 P3H3Q8IVL6 736 aa29.57■■■□□ 2.32
EXOSC4-201ENST00000316052 TEX14Q8IWB6 1497 aa29.56■■■□□ 2.32
EXOSC4-201ENST00000316052 KCNH8Q96L42 1107 aa29.56■■■□□ 2.32
EXOSC4-201ENST00000316052 CD109Q6YHK3 1445 aa29.48■■■□□ 2.31
EXOSC4-201ENST00000316052 ARID3CA6NKF2 412 aa29.48■■■□□ 2.31
EXOSC4-201ENST00000316052 MAGI3Q5TCQ9 1506 aa29.44■■■□□ 2.3
EXOSC4-201ENST00000316052 CFAP43Q8NDM7 1665 aa29.43■■■□□ 2.3
EXOSC4-201ENST00000316052 ATP10BO94823 1461 aa29.42■■■□□ 2.3
EXOSC4-201ENST00000316052 FAM9AQ8IZU1 332 aaPredicted RBP29.42■■■□□ 2.3
EXOSC4-201ENST00000316052 ADGRL1O94910 1474 aa29.41■■■□□ 2.3
EXOSC4-201ENST00000316052 SAMD9Q5K651 1589 aa29.4■■■□□ 2.3
EXOSC4-201ENST00000316052 EEA1Q15075 1411 aa29.37■■■□□ 2.29
EXOSC4-201ENST00000316052 RANGAP1P46060 587 aaPredicted RBP29.34■■■□□ 2.29
EXOSC4-201ENST00000316052 RAPGEF6Q8TEU7 1601 aa29.29■■■□□ 2.28
EXOSC4-201ENST00000316052 FHOD3Q2V2M9 1422 aa29.25■■■□□ 2.27
EXOSC4-201ENST00000316052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.23■■■□□ 2.27
EXOSC4-201ENST00000316052 HNRNPUL2Q1KMD3 747 aaKnown RBP29.23■■■□□ 2.27
EXOSC4-201ENST00000316052 ABCA9Q8IUA7 1624 aa29.23■■■□□ 2.27
EXOSC4-201ENST00000316052 NUP153P49790 1475 aaKnown RBP29.23■■■□□ 2.27
EXOSC4-201ENST00000316052 ARAP3Q8WWN8 1544 aa29.21■■■□□ 2.27
EXOSC4-201ENST00000316052 KIF21BO75037 1637 aa29.16■■■□□ 2.26
EXOSC4-201ENST00000316052 PHLDB1Q86UU1 1377 aa29.13■■■□□ 2.25
EXOSC4-201ENST00000316052 RAPGEF3O95398 923 aa29.11■■■□□ 2.25
EXOSC4-201ENST00000316052 PLEKHD1A6NEE1 506 aa29.08■■■□□ 2.25
EXOSC4-201ENST00000316052 EHMT2Q96KQ7 1210 aa29.08■■■□□ 2.25
EXOSC4-201ENST00000316052 EFCAB5A4FU69 1503 aa29.08■■■□□ 2.25
EXOSC4-201ENST00000316052 NEO1Q92859 1461 aa29.07■■■□□ 2.24
EXOSC4-201ENST00000316052 CHIC1Q5VXU3 224 aa29.06■■■□□ 2.24
EXOSC4-201ENST00000316052 UBTFP17480 764 aaKnown RBP29.01■■■□□ 2.23
EXOSC4-201ENST00000316052 HECW2Q9P2P5 1572 aa29■■■□□ 2.23
EXOSC4-201ENST00000316052 FRMPD1Q5SYB0 1578 aa28.97■■■□□ 2.23
EXOSC4-201ENST00000316052 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.95■■■□□ 2.23
EXOSC4-201ENST00000316052 CDK13Q14004 1512 aaKnown RBP28.94■■■□□ 2.22
EXOSC4-201ENST00000316052 AKNAQ7Z591 1439 aa28.92■■■□□ 2.22
EXOSC4-201ENST00000316052 TTC37Q6PGP7 1564 aa28.9■■■□□ 2.22
EXOSC4-201ENST00000316052 FANCAO15360 1455 aa28.89■■■□□ 2.22
EXOSC4-201ENST00000316052 ARHGAP35Q9NRY4 1499 aa28.89■■■□□ 2.22
EXOSC4-201ENST00000316052 DENND4BO75064 1496 aaPredicted RBP28.88■■■□□ 2.21
EXOSC4-201ENST00000316052 ADAMTSL3P82987 1691 aa28.88■■■□□ 2.21
EXOSC4-201ENST00000316052 ATP1B4Q9UN42 357 aaPredicted RBP28.87■■■□□ 2.21
EXOSC4-201ENST00000316052 RICTORQ6R327 1708 aa28.86■■■□□ 2.21
EXOSC4-201ENST00000316052 ARID4BQ4LE39 1312 aaPredicted RBP28.84■■■□□ 2.21
EXOSC4-201ENST00000316052 FMN1Q68DA7 1419 aa28.84■■■□□ 2.21
EXOSC4-201ENST00000316052 PTPRMP28827 1452 aa28.83■■■□□ 2.21
EXOSC4-201ENST00000316052 ILDR1Q86SU0 546 aaPredicted RBP28.82■■■□□ 2.2
EXOSC4-201ENST00000316052 BCORL1Q5H9F3 1711 aa28.81■■■□□ 2.2
EXOSC4-201ENST00000316052 CFAP74Q9C0B2 1584 aa28.81■■■□□ 2.2
EXOSC4-201ENST00000316052 ARHGEF40Q8TER5 1519 aa28.79■■■□□ 2.2
EXOSC4-201ENST00000316052 PLCH2O75038 1416 aa28.77■■■□□ 2.2
EXOSC4-201ENST00000316052 HECW1Q76N89 1606 aa28.77■■■□□ 2.2
EXOSC4-201ENST00000316052 MADDQ8WXG6 1647 aa28.74■■■□□ 2.19
EXOSC4-201ENST00000316052 CDK11AQ9UQ88 783 aaPredicted RBP28.73■■■□□ 2.19
EXOSC4-201ENST00000316052 ZMYM4Q5VZL5 1548 aa28.73■■■□□ 2.19
EXOSC4-201ENST00000316052 SCAPERQ9BY12 1400 aa28.72■■■□□ 2.19
EXOSC4-201ENST00000316052 YEATS2Q9ULM3 1422 aa28.72■■■□□ 2.19
EXOSC4-201ENST00000316052 EFCAB2Q5VUJ9 269 aa28.68■■■□□ 2.18
EXOSC4-201ENST00000316052 LRRIQ1Q96JM4 1722 aa28.68■■■□□ 2.18
EXOSC4-201ENST00000316052 SIGLEC1Q9BZZ2 1709 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms