RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 NUP160Q12769 1436 aa25.9■■□□□ 1.74
TUBB3-201ENST00000315491 CEP170Q5SW79 1584 aa25.89■■□□□ 1.73
TUBB3-201ENST00000315491 CEP162Q5TB80 1403 aa25.88■■□□□ 1.73
TUBB3-201ENST00000315491 KIAA0586Q9BVV6 1533 aa25.85■■□□□ 1.73
TUBB3-201ENST00000315491 RANGAP1P46060 587 aaPredicted RBP25.83■■□□□ 1.73
TUBB3-201ENST00000315491 IQGAP2Q13576 1575 aa25.81■■□□□ 1.72
TUBB3-201ENST00000315491 CLIP1P30622 1438 aa25.81■■□□□ 1.72
TUBB3-201ENST00000315491 ARHGAP35Q9NRY4 1499 aa25.7■■□□□ 1.7
TUBB3-201ENST00000315491 UGGT2Q9NYU1 1516 aa25.7■■□□□ 1.7
TUBB3-201ENST00000315491 EFCAB5A4FU69 1503 aa25.68■■□□□ 1.7
TUBB3-201ENST00000315491 CLASP1Q7Z460 1538 aa25.68■■□□□ 1.7
TUBB3-201ENST00000315491 OSCARQ8IYS5 282 aa25.67■■□□□ 1.7
TUBB3-201ENST00000315491 JPH4Q96JJ6 628 aa25.67■■□□□ 1.7
TUBB3-201ENST00000315491 SAMD9Q5K651 1589 aa25.64■■□□□ 1.7
TUBB3-201ENST00000315491 ARAP1Q96P48 1450 aa25.62■■□□□ 1.69
TUBB3-201ENST00000315491 P3H3Q8IVL6 736 aa25.61■■□□□ 1.69
TUBB3-201ENST00000315491 SHROOM2Q13796 1616 aa25.59■■□□□ 1.69
TUBB3-201ENST00000315491 DISP1Q96F81 1524 aa25.58■■□□□ 1.69
TUBB3-201ENST00000315491 FHOD3Q2V2M9 1422 aa25.57■■□□□ 1.68
TUBB3-201ENST00000315491 KIAA0556O60303 1618 aa25.56■■□□□ 1.68
TUBB3-201ENST00000315491 CARMIL2Q6F5E8 1435 aa25.55■■□□□ 1.68
TUBB3-201ENST00000315491 PRG4Q92954 1404 aaPredicted RBP25.55■■□□□ 1.68
TUBB3-201ENST00000315491 VPS8Q8N3P4 1428 aa25.52■■□□□ 1.68
TUBB3-201ENST00000315491 FMN1Q68DA7 1419 aa25.45■■□□□ 1.66
TUBB3-201ENST00000315491 ERCC6L2Q5T890 1561 aa25.43■■□□□ 1.66
TUBB3-201ENST00000315491 TTBK1Q5TCY1 1321 aaPredicted RBP25.38■■□□□ 1.65
TUBB3-201ENST00000315491 PTPRGP23470 1445 aa25.34■■□□□ 1.65
TUBB3-201ENST00000315491 PCF11O94913 1555 aaKnown RBP25.34■■□□□ 1.65
TUBB3-201ENST00000315491 CASKIN1Q8WXD9 1431 aa25.34■■□□□ 1.65
TUBB3-201ENST00000315491 FYCO1Q9BQS8 1478 aa25.31■■□□□ 1.64
TUBB3-201ENST00000315491 ATP1B4Q9UN42 357 aaPredicted RBP25.27■■□□□ 1.64
TUBB3-201ENST00000315491 PLB1Q6P1J6 1458 aa25.25■■□□□ 1.63
TUBB3-201ENST00000315491 RAPGEF6Q8TEU7 1601 aa25.24■■□□□ 1.63
TUBB3-201ENST00000315491 APLP2Q06481 763 aa25.24■■□□□ 1.63
TUBB3-201ENST00000315491 ARHGEF11O15085 1522 aa25.24■■□□□ 1.63
TUBB3-201ENST00000315491 HECW1Q76N89 1606 aa25.23■■□□□ 1.63
TUBB3-201ENST00000315491 ABCA8O94911 1581 aa25.23■■□□□ 1.63
TUBB3-201ENST00000315491 UACAQ9BZF9 1416 aa25.19■■□□□ 1.62
TUBB3-201ENST00000315491 NUP153P49790 1475 aaKnown RBP25.17■■□□□ 1.62
TUBB3-201ENST00000315491 MAP3K1Q13233 1512 aa25.16■■□□□ 1.62
TUBB3-201ENST00000315491 TIAM1Q13009 1591 aa25.14■■□□□ 1.62
TUBB3-201ENST00000315491 RIMBP3CA6NJZ7 1639 aa25.14■■□□□ 1.62
TUBB3-201ENST00000315491 RIMBP3BA6NNM3 1639 aa25.14■■□□□ 1.62
TUBB3-201ENST00000315491 RIMBP3Q9UFD9 1639 aa25.14■■□□□ 1.62
TUBB3-201ENST00000315491 CCDC18Q5T9S5 1454 aa25.14■■□□□ 1.62
TUBB3-201ENST00000315491 EPRSP07814 1512 aaKnown RBP25.14■■□□□ 1.61
TUBB3-201ENST00000315491 LRRIQ1Q96JM4 1722 aa25.13■■□□□ 1.61
TUBB3-201ENST00000315491 ABCC2Q92887 1545 aa25.12■■□□□ 1.61
TUBB3-201ENST00000315491 CFAP43Q8NDM7 1665 aa25.12■■□□□ 1.61
TUBB3-201ENST00000315491 UHRF1BP1LA0JNW5 1464 aa25.11■■□□□ 1.61
TUBB3-201ENST00000315491 ARID3CA6NKF2 412 aa25.1■■□□□ 1.61
TUBB3-201ENST00000315491 PPARGC1BQ86YN6 1023 aaKnown RBP25.1■■□□□ 1.61
TUBB3-201ENST00000315491 CDK13Q14004 1512 aaKnown RBP25.09■■□□□ 1.61
TUBB3-201ENST00000315491 KANK4Q5T7N3 995 aaPredicted RBP25.06■■□□□ 1.6
TUBB3-201ENST00000315491 ATP10BO94823 1461 aa25.05■■□□□ 1.6
TUBB3-201ENST00000315491 LRRC9Q6ZRR7 1453 aa25.04■■□□□ 1.6
TUBB3-201ENST00000315491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.03■■□□□ 1.6
TUBB3-201ENST00000315491 HNRNPUL2Q1KMD3 747 aaKnown RBP25.03■■□□□ 1.6
TUBB3-201ENST00000315491 ADCY10Q96PN6 1610 aa25.03■■□□□ 1.6
TUBB3-201ENST00000315491 CYB5RLQ6IPT4 315 aa24.99■■□□□ 1.59
TUBB3-201ENST00000315491 MTUS2Q5JR59 1369 aa24.98■■□□□ 1.59
TUBB3-201ENST00000315491 KDM5BQ9UGL1 1544 aa24.98■■□□□ 1.59
TUBB3-201ENST00000315491 CDK11AQ9UQ88 783 aaPredicted RBP24.98■■□□□ 1.59
TUBB3-201ENST00000315491 MAGI3Q5TCQ9 1506 aa24.97■■□□□ 1.59
TUBB3-201ENST00000315491 EHBP1L1Q8N3D4 1523 aa24.95■■□□□ 1.59
TUBB3-201ENST00000315491 ZCCHC11Q5TAX3 1644 aaKnown RBP24.94■■□□□ 1.58
TUBB3-201ENST00000315491 PLEKHD1A6NEE1 506 aa24.91■■□□□ 1.58
TUBB3-201ENST00000315491 TROQ12816 1431 aaPredicted RBP24.9■■□□□ 1.58
TUBB3-201ENST00000315491 NPM1P06748 294 aaKnown RBP eCLIP24.88■■□□□ 1.57
TUBB3-201ENST00000315491 DNAJC5Q9H3Z4 198 aa24.87■■□□□ 1.57
TUBB3-201ENST00000315491 SUPT6HQ7KZ85 1726 aaKnown RBP24.84■■□□□ 1.57
TUBB3-201ENST00000315491 NCOA2Q15596 1464 aa24.82■■□□□ 1.56
TUBB3-201ENST00000315491 PHLDB1Q86UU1 1377 aa24.78■■□□□ 1.56
TUBB3-201ENST00000315491 ASXL2Q76L83 1435 aa24.77■■□□□ 1.56
TUBB3-201ENST00000315491 WDR7Q9Y4E6 1490 aa24.77■■□□□ 1.56
TUBB3-201ENST00000315491 KIF14Q15058 1648 aa24.76■■□□□ 1.55
TUBB3-201ENST00000315491 TRIM26Q12899 539 aaPredicted RBP24.74■■□□□ 1.55
TUBB3-201ENST00000315491 KCNH8Q96L42 1107 aa24.72■■□□□ 1.55
TUBB3-201ENST00000315491 MAPKBP1O60336 1514 aa24.71■■□□□ 1.55
TUBB3-201ENST00000315491 ABCC10Q5T3U5 1492 aa24.7■■□□□ 1.54
TUBB3-201ENST00000315491 MYOM3Q5VTT5 1437 aa24.69■■□□□ 1.54
TUBB3-201ENST00000315491 CCNB3Q8WWL7 1395 aa24.69■■□□□ 1.54
TUBB3-201ENST00000315491 RRBP1Q9P2E9 1410 aaKnown RBP24.67■■□□□ 1.54
TUBB3-201ENST00000315491 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.66■■□□□ 1.54
TUBB3-201ENST00000315491 GPATCH8Q9UKJ3 1502 aaKnown RBP24.63■■□□□ 1.53
TUBB3-201ENST00000315491 FGD6Q6ZV73 1430 aa24.63■■□□□ 1.53
TUBB3-201ENST00000315491 TTC37Q6PGP7 1564 aa24.63■■□□□ 1.53
TUBB3-201ENST00000315491 MIA2Q96PC5 1412 aa24.6■■□□□ 1.53
TUBB3-201ENST00000315491 ITSN2Q9NZM3 1697 aa24.6■■□□□ 1.53
TUBB3-201ENST00000315491 CDC42BPAQ5VT25 1732 aa24.57■■□□□ 1.52
TUBB3-201ENST00000315491 ABCA9Q8IUA7 1624 aa24.57■■□□□ 1.52
TUBB3-201ENST00000315491 PCGF6Q9BYE7 350 aa24.57■■□□□ 1.52
TUBB3-201ENST00000315491 CFDP1Q9UEE9 299 aaPredicted RBP24.57■■□□□ 1.52
TUBB3-201ENST00000315491 PTPN23Q9H3S7 1636 aa24.54■■□□□ 1.52
TUBB3-201ENST00000315491 PREX2Q70Z35 1606 aa24.54■■□□□ 1.52
TUBB3-201ENST00000315491 FAM50AQ14320 339 aaKnown RBP24.54■■□□□ 1.52
TUBB3-201ENST00000315491 TCOF1Q13428 1488 aaKnown RBP24.53■■□□□ 1.52
TUBB3-201ENST00000315491 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.53■■□□□ 1.52
TUBB3-201ENST00000315491 MYO5CQ9NQX4 1742 aa24.53■■□□□ 1.52
TUBB3-201ENST00000315491 PLCH2O75038 1416 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms