RNA–Protein interactions for RNA: ENST00000315183.11

TNRC6A-201, Transcript of trinucleotide repeat containing 6A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC6A, Length 8,303 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-201ENST00000315183 CFAP53Q96M91 514 aa10.05□□□□□ -0.8
TNRC6A-201ENST00000315183 TNNT2P45379 298 aaPredicted RBP10.05□□□□□ -0.8
TNRC6A-201ENST00000315183 HDAC5Q9UQL6 1122 aa10.04□□□□□ -0.8
TNRC6A-201ENST00000315183 MROH2BQ7Z745 1585 aa10.04□□□□□ -0.8
TNRC6A-201ENST00000315183 SMARCA4P51532 1647 aa10.04□□□□□ -0.8
TNRC6A-201ENST00000315183 WDR43Q15061 677 aaKnown RBP eCLIP10.03□□□□□ -0.8
TNRC6A-201ENST00000315183 TRIM44Q96DX7 344 aaPredicted RBP10.02□□□□□ -0.81
TNRC6A-201ENST00000315183 DDRGK1Q96HY6 314 aa10.02□□□□□ -0.81
TNRC6A-201ENST00000315183 ZNF326Q5BKZ1 582 aaKnown RBP10.01□□□□□ -0.81
TNRC6A-201ENST00000315183 CCDC34Q96HJ3 373 aa9.98□□□□□ -0.81
TNRC6A-201ENST00000315183 CECR2Q9BXF3 1484 aa9.98□□□□□ -0.81
TNRC6A-201ENST00000315183 CEP162Q5TB80 1403 aa9.98□□□□□ -0.81
TNRC6A-201ENST00000315183 MTUS2Q5JR59 1369 aa9.97□□□□□ -0.81
TNRC6A-201ENST00000315183 HMGB2P26583 209 aaKnown RBP9.96□□□□□ -0.81
TNRC6A-201ENST00000315183 TMC1Q8TDI8 760 aa9.96□□□□□ -0.81
TNRC6A-201ENST00000315183 CHMP4CQ96CF2 233 aa9.96□□□□□ -0.82
TNRC6A-201ENST00000315183 PPP1R15AO75807 674 aaPredicted RBP9.95□□□□□ -0.82
TNRC6A-201ENST00000315183 PTMSP20962 102 aa9.95□□□□□ -0.82
TNRC6A-201ENST00000315183 NUDCQ9Y266 331 aa9.94□□□□□ -0.82
TNRC6A-201ENST00000315183 KANK1Q14678 1352 aa9.93□□□□□ -0.82
TNRC6A-201ENST00000315183 CHMP7Q8WUX9 453 aaPredicted RBP9.93□□□□□ -0.82
TNRC6A-201ENST00000315183 CHAF1AQ13111 956 aaPredicted RBP9.92□□□□□ -0.82
TNRC6A-201ENST00000315183 SMARCA2P51531 1590 aa9.92□□□□□ -0.82
TNRC6A-201ENST00000315183 PLEKHD1A6NEE1 506 aa9.92□□□□□ -0.82
TNRC6A-201ENST00000315183 TOP2AP11388 1531 aaKnown RBP9.91□□□□□ -0.82
TNRC6A-201ENST00000315183 HMGXB3Q12766 1538 aa9.91□□□□□ -0.82
TNRC6A-201ENST00000315183 FHAD1B1AJZ9 1412 aa9.91□□□□□ -0.82
TNRC6A-201ENST00000315183 CALD1Q05682 793 aaKnown RBP9.9□□□□□ -0.82
TNRC6A-201ENST00000315183 WWC1Q8IX03 1113 aa9.9□□□□□ -0.82
TNRC6A-201ENST00000315183 CLIP1P30622 1438 aa9.9□□□□□ -0.83
TNRC6A-201ENST00000315183 TMX4Q9H1E5 349 aaPredicted RBP9.89□□□□□ -0.83
TNRC6A-201ENST00000315183 ZNF777Q9ULD5 760 aaPredicted RBP9.89□□□□□ -0.83
TNRC6A-201ENST00000315183 SCRIBQ14160 1630 aa9.88□□□□□ -0.83
TNRC6A-201ENST00000315183 TIMELESSQ9UNS1 1208 aa9.88□□□□□ -0.83
TNRC6A-201ENST00000315183 C14orf37Q86TY3 774 aa9.88□□□□□ -0.83
TNRC6A-201ENST00000315183 CHGAP10645 457 aaKnown RBP9.88□□□□□ -0.83
TNRC6A-201ENST00000315183 WIZO95785 1651 aa9.87□□□□□ -0.83
TNRC6A-201ENST00000315183 PRDM2Q13029 1718 aa9.87□□□□□ -0.83
TNRC6A-201ENST00000315183 HTATSF1O43719 755 aaKnown RBP9.86□□□□□ -0.83
TNRC6A-201ENST00000315183 GOLGA2Q08379 1002 aa9.84□□□□□ -0.83
TNRC6A-201ENST00000315183 CCDC136Q96JN2 1154 aa9.84□□□□□ -0.83
TNRC6A-201ENST00000315183 KIF27Q86VH2 1401 aa9.83□□□□□ -0.84
TNRC6A-201ENST00000315183 KIAA2012Q0VF49 1180 aa9.83□□□□□ -0.84
TNRC6A-201ENST00000315183 PABPN1Q86U42 306 aaKnown RBP eCLIP9.83□□□□□ -0.845e-7■□□□□ 8
TNRC6A-201ENST00000315183 MCCP23508 829 aa9.83□□□□□ -0.84
TNRC6A-201ENST00000315183 CNGB1Q14028 1251 aaPredicted RBP9.83□□□□□ -0.84
TNRC6A-201ENST00000315183 KNSTRNQ9Y448 316 aa9.82□□□□□ -0.84
TNRC6A-201ENST00000315183 SCAF1Q9H7N4 1312 aaKnown RBP9.82□□□□□ -0.84
TNRC6A-201ENST00000315183 ERICH6BQ5W0A0 696 aa9.82□□□□□ -0.84
TNRC6A-201ENST00000315183 MAPK8IP3Q9UPT6 1336 aa9.81□□□□□ -0.84
TNRC6A-201ENST00000315183 NPHP1O15259 732 aa9.8□□□□□ -0.84
TNRC6A-201ENST00000315183 FOXD1Q16676 465 aa9.8□□□□□ -0.84
TNRC6A-201ENST00000315183 PPM1GO15355 546 aaPredicted RBP9.79□□□□□ -0.84
TNRC6A-201ENST00000315183 NCAPD3P42695 1498 aa9.79□□□□□ -0.84
TNRC6A-201ENST00000315183 WASHC2AQ641Q2 1341 aa9.79□□□□□ -0.84
TNRC6A-201ENST00000315183 RSPH4AQ5TD94 716 aa9.78□□□□□ -0.84
TNRC6A-201ENST00000315183 GOLGA3Q08378 1498 aa9.78□□□□□ -0.84
TNRC6A-201ENST00000315183 KIF3AQ9Y496 699 aa9.78□□□□□ -0.84
TNRC6A-201ENST00000315183 ERCC6Q03468 1493 aa9.77□□□□□ -0.84
TNRC6A-201ENST00000315183 FTSJ3Q8IY81 847 aaKnown RBP9.77□□□□□ -0.85
TNRC6A-201ENST00000315183 CARMIL2Q6F5E8 1435 aa9.77□□□□□ -0.85
TNRC6A-201ENST00000315183 PPARGC1BQ86YN6 1023 aaKnown RBP9.76□□□□□ -0.85
TNRC6A-201ENST00000315183 BIVM-ERCC5R4GMW8 1640 aa9.76□□□□□ -0.85
TNRC6A-201ENST00000315183 BAZ1BQ9UIG0 1483 aaKnown RBP9.75□□□□□ -0.85
TNRC6A-201ENST00000315183 CEP164Q9UPV0 1460 aa9.75□□□□□ -0.85
TNRC6A-201ENST00000315183 EIF3AQ14152 1382 aaKnown RBP9.75□□□□□ -0.85
TNRC6A-201ENST00000315183 LRRFIP1Q32MZ4 808 aaKnown RBP9.75□□□□□ -0.85
TNRC6A-201ENST00000315183 HNRNPUQ00839 825 aaKnown RBP eCLIP9.74□□□□□ -0.855e-6■■■□□ 19
TNRC6A-201ENST00000315183 FGD1P98174 961 aa9.74□□□□□ -0.85
TNRC6A-201ENST00000315183 IPO8O15397 1037 aaKnown RBP9.74□□□□□ -0.85
TNRC6A-201ENST00000315183 CSPP1Q1MSJ5 1256 aa9.73□□□□□ -0.85
TNRC6A-201ENST00000315183 GOLGA6L4A6NEF3 574 aa9.73□□□□□ -0.85
TNRC6A-201ENST00000315183 PHLDB1Q86UU1 1377 aa9.72□□□□□ -0.85
TNRC6A-201ENST00000315183 PTMAP06454 111 aaKnown RBP9.72□□□□□ -0.85
TNRC6A-201ENST00000315183 SYAP1Q96A49 352 aaPredicted RBP9.71□□□□□ -0.85
TNRC6A-201ENST00000315183 GPATCH3Q96I76 525 aa9.71□□□□□ -0.85
TNRC6A-201ENST00000315183 MRS2Q9HD23 443 aa9.71□□□□□ -0.86
TNRC6A-201ENST00000315183 WRNQ14191 1432 aaPredicted RBP eCLIP9.71□□□□□ -0.86
TNRC6A-201ENST00000315183 TPM4P67936 248 aa9.71□□□□□ -0.86
TNRC6A-201ENST00000315183 NGEFQ8N5V2 710 aa9.71□□□□□ -0.86
TNRC6A-201ENST00000315183 CFDP1Q9UEE9 299 aaPredicted RBP9.7□□□□□ -0.86
TNRC6A-201ENST00000315183 POGKQ9P215 609 aa9.7□□□□□ -0.86
TNRC6A-201ENST00000315183 ATAD2BQ9ULI0 1458 aa9.7□□□□□ -0.86
TNRC6A-201ENST00000315183 LOC105371045A0A1W2PR82 267 aa9.69□□□□□ -0.86
TNRC6A-201ENST00000315183 LMOD3Q0VAK6 560 aa9.68□□□□□ -0.86
TNRC6A-201ENST00000315183 KCNJ4P48050 445 aa9.68□□□□□ -0.86
TNRC6A-201ENST00000315183 ABCC8Q09428 1581 aa9.68□□□□□ -0.86
TNRC6A-201ENST00000315183 UACAQ9BZF9 1416 aa9.68□□□□□ -0.86
TNRC6A-201ENST00000315183 STAC3Q96MF2 364 aa9.67□□□□□ -0.86
TNRC6A-201ENST00000315183 PDS5BQ9NTI5 1447 aa9.67□□□□□ -0.86
TNRC6A-201ENST00000315183 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.67□□□□□ -0.868e-7■■□□□ 12.1
TNRC6A-201ENST00000315183 KIAA1211Q6ZU35 1233 aa9.66□□□□□ -0.86
TNRC6A-201ENST00000315183 A0A0G2JS52 829 aa9.66□□□□□ -0.86
TNRC6A-201ENST00000315183 GOLGA6L1Q8N7Z2 621 aa9.66□□□□□ -0.86
TNRC6A-201ENST00000315183 OS9Q13438 667 aaPredicted RBP9.65□□□□□ -0.86
TNRC6A-201ENST00000315183 TMF1P82094 1093 aa9.65□□□□□ -0.86
TNRC6A-201ENST00000315183 DCAF8L1A6NGE4 600 aa9.65□□□□□ -0.87
TNRC6A-201ENST00000315183 SPAG9O60271 1321 aaKnown RBP9.65□□□□□ -0.87
TNRC6A-201ENST00000315183 HSP90B1P14625 803 aaKnown RBP9.65□□□□□ -0.87
TNRC6A-201ENST00000315183 SETD5Q9C0A6 1442 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms