RNA–Protein interactions for RNA: ENST00000314891.10

LPCAT4-201, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT4, Length 2,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-201ENST00000314891 PCF11O94913 1555 aaKnown RBP31.6■■■□□ 2.65
LPCAT4-201ENST00000314891 FHAD1B1AJZ9 1412 aa31.57■■■□□ 2.64
LPCAT4-201ENST00000314891 GAPVD1Q14C86 1478 aa31.57■■■□□ 2.64
LPCAT4-201ENST00000314891 FHOD3Q2V2M9 1422 aa31.56■■■□□ 2.64
LPCAT4-201ENST00000314891 CCNB3Q8WWL7 1395 aa31.56■■■□□ 2.64
LPCAT4-201ENST00000314891 EFCAB5A4FU69 1503 aa31.54■■■□□ 2.64
LPCAT4-201ENST00000314891 CFAP43Q8NDM7 1665 aa31.53■■■□□ 2.64
LPCAT4-201ENST00000314891 LRRC9Q6ZRR7 1453 aa31.53■■■□□ 2.64
LPCAT4-201ENST00000314891 TARBP1Q13395 1621 aaKnown RBP31.52■■■□□ 2.64
LPCAT4-201ENST00000314891 DIEXFQ68CQ4 756 aaKnown RBP31.47■■■□□ 2.63
LPCAT4-201ENST00000314891 DHX57Q6P158 1386 aaKnown RBP31.45■■■□□ 2.63
LPCAT4-201ENST00000314891 FYCO1Q9BQS8 1478 aa31.41■■■□□ 2.62
LPCAT4-201ENST00000314891 ATP1B4Q9UN42 357 aaPredicted RBP31.41■■■□□ 2.62
LPCAT4-201ENST00000314891 ZNF316A6NFI3 1004 aaPredicted RBP31.39■■■□□ 2.62
LPCAT4-201ENST00000314891 ITGAEP38570 1179 aa31.39■■■□□ 2.62
LPCAT4-201ENST00000314891 PHLDB1Q86UU1 1377 aa31.39■■■□□ 2.62
LPCAT4-201ENST00000314891 CASKIN1Q8WXD9 1431 aa31.38■■■□□ 2.61
LPCAT4-201ENST00000314891 PBRM1Q86U86 1689 aa31.36■■■□□ 2.61
LPCAT4-201ENST00000314891 AQRO60306 1485 aaKnown RBP eCLIP31.36■■■□□ 2.611e-6■■■■■ 35.5
LPCAT4-201ENST00000314891 SAMD9Q5K651 1589 aa31.35■■■□□ 2.61
LPCAT4-201ENST00000314891 MRC2Q9UBG0 1479 aa31.33■■■□□ 2.61
LPCAT4-201ENST00000314891 CLSPNQ9HAW4 1339 aa31.31■■■□□ 2.6
LPCAT4-201ENST00000314891 FMN1Q68DA7 1419 aa31.3■■■□□ 2.6
LPCAT4-201ENST00000314891 SNAPC4Q5SXM2 1469 aa31.3■■■□□ 2.6
LPCAT4-201ENST00000314891 LRRIQ1Q96JM4 1722 aa31.26■■■□□ 2.59
LPCAT4-201ENST00000314891 RAB3GAP2Q9H2M9 1393 aa31.19■■■□□ 2.58
LPCAT4-201ENST00000314891 ADAMTS12P58397 1594 aa31.19■■■□□ 2.58
LPCAT4-201ENST00000314891 FAM50AQ14320 339 aaKnown RBP31.18■■■□□ 2.58
LPCAT4-201ENST00000314891 WDR62O43379 1518 aa31.13■■■□□ 2.57
LPCAT4-201ENST00000314891 GRIN2BQ13224 1484 aa31.13■■■□□ 2.57
LPCAT4-201ENST00000314891 ZNF608Q9ULD9 1512 aaPredicted RBP31.11■■■□□ 2.57
LPCAT4-201ENST00000314891 SETD5Q9C0A6 1442 aa31.09■■■□□ 2.57
LPCAT4-201ENST00000314891 IQGAP2Q13576 1575 aa31.07■■■□□ 2.56
LPCAT4-201ENST00000314891 IFT140Q96RY7 1462 aa31.07■■■□□ 2.56
LPCAT4-201ENST00000314891 THOC2Q8NI27 1593 aaKnown RBP31.05■■■□□ 2.56
LPCAT4-201ENST00000314891 MTUS2Q5JR59 1369 aa31.05■■■□□ 2.56
LPCAT4-201ENST00000314891 MAPKBP1O60336 1514 aa31.04■■■□□ 2.56
LPCAT4-201ENST00000314891 FGD6Q6ZV73 1430 aa31.01■■■□□ 2.55
LPCAT4-201ENST00000314891 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31■■■□□ 2.55
LPCAT4-201ENST00000314891 NCOA2Q15596 1464 aa30.95■■■□□ 2.54
LPCAT4-201ENST00000314891 SUPT6HQ7KZ85 1726 aaKnown RBP30.94■■■□□ 2.54
LPCAT4-201ENST00000314891 SCAF1Q9H7N4 1312 aaKnown RBP30.94■■■□□ 2.54
LPCAT4-201ENST00000314891 EIF4G3O43432 1585 aaKnown RBP30.94■■■□□ 2.54
LPCAT4-201ENST00000314891 MAGI3Q5TCQ9 1506 aa30.93■■■□□ 2.54
LPCAT4-201ENST00000314891 EHBP1L1Q8N3D4 1523 aa30.93■■■□□ 2.54
LPCAT4-201ENST00000314891 ERCC6Q03468 1493 aa30.91■■■□□ 2.54
LPCAT4-201ENST00000314891 HECW1Q76N89 1606 aa30.9■■■□□ 2.54
LPCAT4-201ENST00000314891 MIER1Q8N108 512 aa30.87■■■□□ 2.53
LPCAT4-201ENST00000314891 CCDC18Q5T9S5 1454 aa30.87■■■□□ 2.53
LPCAT4-201ENST00000314891 UGGT2Q9NYU1 1516 aa30.87■■■□□ 2.53
LPCAT4-201ENST00000314891 MYOM3Q5VTT5 1437 aa30.86■■■□□ 2.53
LPCAT4-201ENST00000314891 NEUROD1Q13562 356 aa30.86■■■□□ 2.53
LPCAT4-201ENST00000314891 ACIN1Q9UKV3 1341 aaKnown RBP30.84■■■□□ 2.53
LPCAT4-201ENST00000314891 PTPRKQ15262 1439 aa30.83■■■□□ 2.53
LPCAT4-201ENST00000314891 ARHGEF11O15085 1522 aa30.82■■■□□ 2.52
LPCAT4-201ENST00000314891 EPRSP07814 1512 aaKnown RBP30.82■■■□□ 2.52
LPCAT4-201ENST00000314891 GRIN2AQ12879 1464 aa30.8■■■□□ 2.52
LPCAT4-201ENST00000314891 KIAA0586Q9BVV6 1533 aa30.79■■■□□ 2.52
LPCAT4-201ENST00000314891 CDK13Q14004 1512 aaKnown RBP30.79■■■□□ 2.52
LPCAT4-201ENST00000314891 PTPN23Q9H3S7 1636 aa30.78■■■□□ 2.52
LPCAT4-201ENST00000314891 KIAA0556O60303 1618 aa30.76■■■□□ 2.52
LPCAT4-201ENST00000314891 DISP1Q96F81 1524 aa30.76■■■□□ 2.51
LPCAT4-201ENST00000314891 SIN3AQ96ST3 1273 aa30.74■■■□□ 2.51
LPCAT4-201ENST00000314891 CENPBP07199 599 aaPredicted RBP30.72■■■□□ 2.51
LPCAT4-201ENST00000314891 ARID3CA6NKF2 412 aa30.72■■■□□ 2.51
LPCAT4-201ENST00000314891 HFM1A2PYH4 1435 aa30.71■■■□□ 2.51
LPCAT4-201ENST00000314891 MAGI1Q96QZ7 1491 aaPredicted RBP30.68■■■□□ 2.5
LPCAT4-201ENST00000314891 CEP170Q5SW79 1584 aa30.64■■■□□ 2.5
LPCAT4-201ENST00000314891 YTHDC1Q96MU7 727 aaKnown RBP30.64■■■□□ 2.5
LPCAT4-201ENST00000314891 NAIPQ13075 1403 aa30.64■■■□□ 2.5
LPCAT4-201ENST00000314891 TCOF1Q13428 1488 aaKnown RBP30.63■■■□□ 2.49
LPCAT4-201ENST00000314891 SYNJ2O15056 1496 aa30.61■■■□□ 2.49
LPCAT4-201ENST00000314891 RAPGEF6Q8TEU7 1601 aa30.6■■■□□ 2.49
LPCAT4-201ENST00000314891 CHMP7Q8WUX9 453 aaPredicted RBP30.59■■■□□ 2.49
LPCAT4-201ENST00000314891 NUP153P49790 1475 aaKnown RBP30.58■■■□□ 2.49
LPCAT4-201ENST00000314891 UACAQ9BZF9 1416 aa30.57■■■□□ 2.48
LPCAT4-201ENST00000314891 FBLN2P98095 1184 aa30.54■■■□□ 2.48
LPCAT4-201ENST00000314891 MIA2Q96PC5 1412 aa30.52■■■□□ 2.48
LPCAT4-201ENST00000314891 GCC2Q8IWJ2 1684 aa30.51■■■□□ 2.47
LPCAT4-201ENST00000314891 CHIC2Q9UKJ5 165 aa30.5■■■□□ 2.47
LPCAT4-201ENST00000314891 TIMELESSQ9UNS1 1208 aa30.49■■■□□ 2.47
LPCAT4-201ENST00000314891 RRP7BPQ9NSQ0 103 aa30.49■■■□□ 2.47
LPCAT4-201ENST00000314891 NUP160Q12769 1436 aa30.46■■■□□ 2.47
LPCAT4-201ENST00000314891 GTF3C3Q9Y5Q9 886 aa30.45■■■□□ 2.47
LPCAT4-201ENST00000314891 KDM6BO15054 1643 aa30.44■■■□□ 2.46
LPCAT4-201ENST00000314891 PLB1Q6P1J6 1458 aa30.43■■■□□ 2.46
LPCAT4-201ENST00000314891 PPP1R15AO75807 674 aaPredicted RBP30.42■■■□□ 2.46
LPCAT4-201ENST00000314891 AKNAQ7Z591 1439 aa30.39■■■□□ 2.46
LPCAT4-201ENST00000314891 JPH4Q96JJ6 628 aa30.38■■■□□ 2.45
LPCAT4-201ENST00000314891 PRG4Q92954 1404 aaPredicted RBP30.35■■■□□ 2.45
LPCAT4-201ENST00000314891 TONSLQ96HA7 1378 aa30.34■■■□□ 2.45
LPCAT4-201ENST00000314891 CARMIL2Q6F5E8 1435 aa30.34■■■□□ 2.45
LPCAT4-201ENST00000314891 CDK11AQ9UQ88 783 aaPredicted RBP30.34■■■□□ 2.45
LPCAT4-201ENST00000314891 DENND4BO75064 1496 aaPredicted RBP30.33■■■□□ 2.45
LPCAT4-201ENST00000314891 DNMT1P26358 1616 aaKnown RBP30.33■■■□□ 2.45
LPCAT4-201ENST00000314891 ZNF644Q9H582 1327 aaPredicted RBP30.32■■■□□ 2.44
LPCAT4-201ENST00000314891 DAPK1P53355 1430 aa30.32■■■□□ 2.44
LPCAT4-201ENST00000314891 TROQ12816 1431 aaPredicted RBP30.31■■■□□ 2.44
LPCAT4-201ENST00000314891 KIF14Q15058 1648 aa30.28■■■□□ 2.44
LPCAT4-201ENST00000314891 ABCC5O15440 1437 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms