RNA–Protein interactions for RNA: ENST00000314616.10

SUPT6H-201, Transcript of SPT6 homolog, histone chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT6H, Length 6,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-201ENST00000314616 SENP3Q9H4L4 574 aaPredicted RBP10.92□□□□□ -0.66
SUPT6H-201ENST00000314616 SALL2Q9Y467 1007 aaPredicted RBP10.92□□□□□ -0.66
SUPT6H-201ENST00000314616 ERCC6Q03468 1493 aa10.9□□□□□ -0.66
SUPT6H-201ENST00000314616 ZNF777Q9ULD5 760 aaPredicted RBP10.9□□□□□ -0.66
SUPT6H-201ENST00000314616 NEFMP07197 916 aa10.9□□□□□ -0.66
SUPT6H-201ENST00000314616 CCDC88BA6NC98 1476 aa10.89□□□□□ -0.67
SUPT6H-201ENST00000314616 CHMP7Q8WUX9 453 aaPredicted RBP10.89□□□□□ -0.67
SUPT6H-201ENST00000314616 USP35Q9P2H5 1018 aa10.89□□□□□ -0.67
SUPT6H-201ENST00000314616 WRNQ14191 1432 aaPredicted RBP eCLIP10.89□□□□□ -0.67
SUPT6H-201ENST00000314616 IRX6P78412 446 aaPredicted RBP10.89□□□□□ -0.67
SUPT6H-201ENST00000314616 TRIM52Q96A61 297 aa10.88□□□□□ -0.67
SUPT6H-201ENST00000314616 LAS1LQ9Y4W2 734 aaKnown RBP10.86□□□□□ -0.67
SUPT6H-201ENST00000314616 ABCC8Q09428 1581 aa10.85□□□□□ -0.67
SUPT6H-201ENST00000314616 ZBTB7CA1YPR0 619 aa10.85□□□□□ -0.67
SUPT6H-201ENST00000314616 PDE4CQ08493 712 aa10.84□□□□□ -0.67
SUPT6H-201ENST00000314616 HSP90AA1P07900 732 aaKnown RBP10.81□□□□□ -0.68
SUPT6H-201ENST00000314616 MAPK8IP2Q13387 824 aaPredicted RBP10.8□□□□□ -0.68
SUPT6H-201ENST00000314616 SOGA1O94964 1423 aa10.8□□□□□ -0.68
SUPT6H-201ENST00000314616 ANP32BQ92688 251 aaKnown RBP10.79□□□□□ -0.68
SUPT6H-201ENST00000314616 SMARCA2P51531 1590 aa10.78□□□□□ -0.68
SUPT6H-201ENST00000314616 ATAD2BQ9ULI0 1458 aa10.78□□□□□ -0.68
SUPT6H-201ENST00000314616 SMARCA4P51532 1647 aa10.78□□□□□ -0.68
SUPT6H-201ENST00000314616 ZNF526Q8TF50 670 aaPredicted RBP10.75□□□□□ -0.69
SUPT6H-201ENST00000314616 CHIC2Q9UKJ5 165 aa10.74□□□□□ -0.69
SUPT6H-201ENST00000314616 TOP2AP11388 1531 aaKnown RBP10.74□□□□□ -0.69
SUPT6H-201ENST00000314616 ERICH6BQ5W0A0 696 aa10.73□□□□□ -0.69
SUPT6H-201ENST00000314616 APPP05067 770 aa10.73□□□□□ -0.69
SUPT6H-201ENST00000314616 KCNH8Q96L42 1107 aa10.72□□□□□ -0.69
SUPT6H-201ENST00000314616 CLIP1P30622 1438 aa10.72□□□□□ -0.69
SUPT6H-201ENST00000314616 CUX2O14529 1486 aa10.72□□□□□ -0.69
SUPT6H-201ENST00000314616 TDRD9Q8NDG6 1382 aaKnown RBP10.71□□□□□ -0.69
SUPT6H-201ENST00000314616 KIF27Q86VH2 1401 aa10.71□□□□□ -0.69
SUPT6H-201ENST00000314616 HSP90AA2PQ14568 343 aaPredicted RBP10.71□□□□□ -0.69
SUPT6H-201ENST00000314616 TRIM44Q96DX7 344 aaPredicted RBP10.71□□□□□ -0.69
SUPT6H-201ENST00000314616 CHGAP10645 457 aaKnown RBP10.68□□□□□ -0.7
SUPT6H-201ENST00000314616 CEP162Q5TB80 1403 aa10.68□□□□□ -0.7
SUPT6H-201ENST00000314616 NPM1P06748 294 aaKnown RBP eCLIP10.68□□□□□ -0.7
SUPT6H-201ENST00000314616 ESF1Q9H501 851 aaKnown RBP10.67□□□□□ -0.7
SUPT6H-201ENST00000314616 TAOK2Q9UL54 1235 aa10.67□□□□□ -0.7
SUPT6H-201ENST00000314616 DNAJC5BQ9UF47 199 aa10.67□□□□□ -0.7
SUPT6H-201ENST00000314616 TNNT3P45378 269 aaPredicted RBP10.67□□□□□ -0.7
SUPT6H-201ENST00000314616 CADPSQ9ULU8 1353 aa10.67□□□□□ -0.7
SUPT6H-201ENST00000314616 GOLGA3Q08378 1498 aa10.67□□□□□ -0.7
SUPT6H-201ENST00000314616 TPRNQ4KMQ1 711 aa10.67□□□□□ -0.7
SUPT6H-201ENST00000314616 DNTTIP2Q5QJE6 756 aaKnown RBP10.67□□□□□ -0.7
SUPT6H-201ENST00000314616 EIF4G1Q04637 1599 aaKnown RBP10.66□□□□□ -0.7
SUPT6H-201ENST00000314616 PAXIP1Q6ZW49 1069 aaPredicted RBP10.65□□□□□ -0.7
SUPT6H-201ENST00000314616 STAG3Q9UJ98 1225 aa10.65□□□□□ -0.7
SUPT6H-201ENST00000314616 PDS5BQ9NTI5 1447 aa10.65□□□□□ -0.7
SUPT6H-201ENST00000314616 CARMIL1Q5VZK9 1371 aa10.63□□□□□ -0.71
SUPT6H-201ENST00000314616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.62□□□□□ -0.712e-8■■■■□ 20.3
SUPT6H-201ENST00000314616 MTUS2Q5JR59 1369 aa10.62□□□□□ -0.71
SUPT6H-201ENST00000314616 NOP58Q9Y2X3 529 aaKnown RBP10.62□□□□□ -0.71
SUPT6H-201ENST00000314616 NCLP19338 710 aaKnown RBP10.61□□□□□ -0.71
SUPT6H-201ENST00000314616 RBM19Q9Y4C8 960 aaKnown RBP10.6□□□□□ -0.71
SUPT6H-201ENST00000314616 RUSC2Q8N2Y8 1516 aa10.6□□□□□ -0.71
SUPT6H-201ENST00000314616 C14orf37Q86TY3 774 aa10.59□□□□□ -0.71
SUPT6H-201ENST00000314616 CEP164Q9UPV0 1460 aa10.59□□□□□ -0.71
SUPT6H-201ENST00000314616 PATL2C9JE40 543 aaKnown RBP10.58□□□□□ -0.71
SUPT6H-201ENST00000314616 EEA1Q15075 1411 aa10.58□□□□□ -0.72
SUPT6H-201ENST00000314616 FANCD2Q9BXW9 1451 aa10.58□□□□□ -0.72
SUPT6H-201ENST00000314616 RRP7BPQ9NSQ0 103 aa10.58□□□□□ -0.72
SUPT6H-201ENST00000314616 MIER1Q8N108 512 aa10.58□□□□□ -0.72
SUPT6H-201ENST00000314616 AEBP2Q6ZN18 517 aaPredicted RBP10.58□□□□□ -0.72
SUPT6H-201ENST00000314616 SUPT16HQ9Y5B9 1047 aaKnown RBP10.58□□□□□ -0.72
SUPT6H-201ENST00000314616 NESP48681 1621 aa10.57□□□□□ -0.72
SUPT6H-201ENST00000314616 IL27Q8NEV9 243 aa10.57□□□□□ -0.72
SUPT6H-201ENST00000314616 TSHZ2Q9NRE2 1034 aa10.57□□□□□ -0.72
SUPT6H-201ENST00000314616 CC2D2AQ9P2K1 1620 aa10.56□□□□□ -0.72
SUPT6H-201ENST00000314616 TNIKQ9UKE5 1360 aa10.56□□□□□ -0.72
SUPT6H-201ENST00000314616 PDIA4P13667 645 aaKnown RBP10.56□□□□□ -0.72
SUPT6H-201ENST00000314616 BICRAQ9NZM4 1560 aa10.55□□□□□ -0.72
SUPT6H-201ENST00000314616 PTMSP20962 102 aa10.54□□□□□ -0.72
SUPT6H-201ENST00000314616 PLEKHD1A6NEE1 506 aa10.54□□□□□ -0.72
SUPT6H-201ENST00000314616 PRM3Q9NNZ6 103 aa10.54□□□□□ -0.72
SUPT6H-201ENST00000314616 SENP3-EIF4A1A0A087X0R7 540 aa10.53□□□□□ -0.72
SUPT6H-201ENST00000314616 ANP32CO43423 234 aa10.53□□□□□ -0.72
SUPT6H-201ENST00000314616 CLSTN1O94985 981 aa10.53□□□□□ -0.72
SUPT6H-201ENST00000314616 UBE2Q2Q8WVN8 375 aa10.53□□□□□ -0.72
SUPT6H-201ENST00000314616 RAD54L2Q9Y4B4 1467 aa10.52□□□□□ -0.73
SUPT6H-201ENST00000314616 BCL11BQ9C0K0 894 aaPredicted RBP10.52□□□□□ -0.73
SUPT6H-201ENST00000314616 PNNQ9H307 717 aaKnown RBP10.52□□□□□ -0.73
SUPT6H-201ENST00000314616 CALRP27797 417 aaKnown RBP10.51□□□□□ -0.73
SUPT6H-201ENST00000314616 NCAPD3P42695 1498 aa10.51□□□□□ -0.73
SUPT6H-201ENST00000314616 AEBP1Q8IUX7 1158 aa10.51□□□□□ -0.73
SUPT6H-201ENST00000314616 PTMAP06454 111 aaKnown RBP10.5□□□□□ -0.73
SUPT6H-201ENST00000314616 UPF2Q9HAU5 1272 aaKnown RBP10.49□□□□□ -0.73
SUPT6H-201ENST00000314616 TSPY4P0CV99 314 aa10.49□□□□□ -0.73
SUPT6H-201ENST00000314616 TSPY10P0CW01 314 aa10.49□□□□□ -0.73
SUPT6H-201ENST00000314616 KANK4Q5T7N3 995 aaPredicted RBP10.48□□□□□ -0.73
SUPT6H-201ENST00000314616 RAPGEF2Q9Y4G8 1499 aa10.48□□□□□ -0.73
SUPT6H-201ENST00000314616 NPHP1O15259 732 aa10.47□□□□□ -0.73
SUPT6H-201ENST00000314616 RSPH6AQ9H0K4 717 aa10.47□□□□□ -0.73
SUPT6H-201ENST00000314616 CFDP1Q9UEE9 299 aaPredicted RBP10.47□□□□□ -0.73
SUPT6H-201ENST00000314616 PLCD3Q8N3E9 789 aa10.47□□□□□ -0.73
SUPT6H-201ENST00000314616 HIRIP3Q9BW71 556 aaPredicted RBP10.47□□□□□ -0.73
SUPT6H-201ENST00000314616 KDM2AQ9Y2K7 1162 aa10.46□□□□□ -0.73
SUPT6H-201ENST00000314616 HNRNPUQ00839 825 aaKnown RBP eCLIP10.46□□□□□ -0.74
SUPT6H-201ENST00000314616 FGD5Q6ZNL6 1462 aa10.45□□□□□ -0.74
SUPT6H-201ENST00000314616 UNC13AQ9UPW8 1703 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms