RNA–Protein interactions for RNA: ENST00000314557.10

MITF-201, Transcript of melanogenesis associated transcription factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MITF, Length 1,798 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MITF-201ENST00000314557 GTF3C3Q9Y5Q9 886 aa11.21□□□□□ -0.61
MITF-201ENST00000314557 CLSPNQ9HAW4 1339 aa11.21□□□□□ -0.61
MITF-201ENST00000314557 ATAD2BQ9ULI0 1458 aa11.2□□□□□ -0.62
MITF-201ENST00000314557 TTBK1Q5TCY1 1321 aaPredicted RBP11.19□□□□□ -0.62
MITF-201ENST00000314557 ERICH3Q5RHP9 1530 aa11.18□□□□□ -0.62
MITF-201ENST00000314557 TOP2BQ02880 1626 aa11.18□□□□□ -0.62
MITF-201ENST00000314557 BIVM-ERCC5R4GMW8 1640 aa11.16□□□□□ -0.62
MITF-201ENST00000314557 RAPGEF2Q9Y4G8 1499 aa11.12□□□□□ -0.63
MITF-201ENST00000314557 POLA2Q14181 598 aa11.11□□□□□ -0.63
MITF-201ENST00000314557 PABPN1Q86U42 306 aaKnown RBP eCLIP11.11□□□□□ -0.63
MITF-201ENST00000314557 HMGXB3Q12766 1538 aa11.08□□□□□ -0.64
MITF-201ENST00000314557 PRXQ9BXM0 1461 aa11.08□□□□□ -0.64
MITF-201ENST00000314557 SLC4A1APQ9BWU0 796 aaKnown RBP11.07□□□□□ -0.64
MITF-201ENST00000314557 FOXD4L1Q9NU39 408 aa11.06□□□□□ -0.64
MITF-201ENST00000314557 KIF27Q86VH2 1401 aa11.04□□□□□ -0.64
MITF-201ENST00000314557 MIER1Q8N108 512 aa11.03□□□□□ -0.64
MITF-201ENST00000314557 RRBP1Q9P2E9 1410 aaKnown RBP11.02□□□□□ -0.64
MITF-201ENST00000314557 ARAP1Q96P48 1450 aa11.02□□□□□ -0.65
MITF-201ENST00000314557 CUX2O14529 1486 aa11.02□□□□□ -0.65
MITF-201ENST00000314557 YTHDC1Q96MU7 727 aaKnown RBP11.01□□□□□ -0.65
MITF-201ENST00000314557 NCAPD3P42695 1498 aa11□□□□□ -0.65
MITF-201ENST00000314557 ZBTB12Q9Y330 459 aaPredicted RBP11□□□□□ -0.65
MITF-201ENST00000314557 DHX57Q6P158 1386 aaKnown RBP11□□□□□ -0.65
MITF-201ENST00000314557 PRDM2Q13029 1718 aa10.98□□□□□ -0.65
MITF-201ENST00000314557 MAP3K1Q13233 1512 aa10.98□□□□□ -0.65
MITF-201ENST00000314557 CHRDL2Q6WN34 429 aa10.98□□□□□ -0.65
MITF-201ENST00000314557 CUX1P39880 1505 aa10.96□□□□□ -0.65
MITF-201ENST00000314557 CCNB3Q8WWL7 1395 aa10.94□□□□□ -0.66
MITF-201ENST00000314557 CFTRP13569 1480 aa10.94□□□□□ -0.66
MITF-201ENST00000314557 ATF5Q9Y2D1 282 aaPredicted RBP10.93□□□□□ -0.66
MITF-201ENST00000314557 AKT1S1Q96B36 256 aa10.91□□□□□ -0.66
MITF-201ENST00000314557 RANGAP1P46060 587 aaPredicted RBP10.9□□□□□ -0.66
MITF-201ENST00000314557 ARHGAP35Q9NRY4 1499 aa10.9□□□□□ -0.66
MITF-201ENST00000314557 TIAM1Q13009 1591 aa10.89□□□□□ -0.67
MITF-201ENST00000314557 FHAD1B1AJZ9 1412 aa10.87□□□□□ -0.67
MITF-201ENST00000314557 KANK4Q5T7N3 995 aaPredicted RBP10.87□□□□□ -0.67
MITF-201ENST00000314557 TIMELESSQ9UNS1 1208 aa10.86□□□□□ -0.67
MITF-201ENST00000314557 CFAP43Q8NDM7 1665 aa10.84□□□□□ -0.67
MITF-201ENST00000314557 SETD5Q9C0A6 1442 aa10.84□□□□□ -0.67
MITF-201ENST00000314557 RAB3GAP2Q9H2M9 1393 aa10.82□□□□□ -0.68
MITF-201ENST00000314557 LRRC9Q6ZRR7 1453 aa10.82□□□□□ -0.68
MITF-201ENST00000314557 IGF1RP08069 1367 aa10.8□□□□□ -0.68
MITF-201ENST00000314557 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.8□□□□□ -0.68
MITF-201ENST00000314557 EFCAB5A4FU69 1503 aa10.8□□□□□ -0.68
MITF-201ENST00000314557 CARMIL1Q5VZK9 1371 aa10.8□□□□□ -0.68
MITF-201ENST00000314557 SUPT16HQ9Y5B9 1047 aaKnown RBP10.8□□□□□ -0.68
MITF-201ENST00000314557 ATXN8OSP0DMR3 200 aa10.79□□□□□ -0.68
MITF-201ENST00000314557 MAPKBP1O60336 1514 aa10.79□□□□□ -0.68
MITF-201ENST00000314557 CADPSQ9ULU8 1353 aa10.78□□□□□ -0.68
MITF-201ENST00000314557 OSCARQ8IYS5 282 aa10.77□□□□□ -0.68
MITF-201ENST00000314557 AQRO60306 1485 aaKnown RBP eCLIP10.77□□□□□ -0.68
MITF-201ENST00000314557 FYCO1Q9BQS8 1478 aa10.77□□□□□ -0.68
MITF-201ENST00000314557 ZBTB22O15209 634 aa10.77□□□□□ -0.69
MITF-201ENST00000314557 FGD5Q6ZNL6 1462 aa10.76□□□□□ -0.69
MITF-201ENST00000314557 REM2Q8IYK8 340 aaPredicted RBP10.76□□□□□ -0.69
MITF-201ENST00000314557 CC2D2AQ9P2K1 1620 aa10.76□□□□□ -0.69
MITF-201ENST00000314557 CUL7Q14999 1698 aa10.75□□□□□ -0.69
MITF-201ENST00000314557 PCF11O94913 1555 aaKnown RBP10.73□□□□□ -0.69
MITF-201ENST00000314557 ITGAEP38570 1179 aa10.73□□□□□ -0.69
MITF-201ENST00000314557 CASKIN1Q8WXD9 1431 aa10.72□□□□□ -0.69
MITF-201ENST00000314557 DNMBPQ6XZF7 1577 aa10.71□□□□□ -0.69
MITF-201ENST00000314557 CCER2I3L3R5 266 aa10.71□□□□□ -0.69
MITF-201ENST00000314557 FMN1Q68DA7 1419 aa10.71□□□□□ -0.7
MITF-201ENST00000314557 CTTNBP2Q8WZ74 1663 aa10.71□□□□□ -0.7
MITF-201ENST00000314557 PHLDB1Q86UU1 1377 aa10.7□□□□□ -0.7
MITF-201ENST00000314557 ABCA10Q8WWZ4 1543 aa10.7□□□□□ -0.7
MITF-201ENST00000314557 NEFLP07196 543 aa10.7□□□□□ -0.7
MITF-201ENST00000314557 FAM50AQ14320 339 aaKnown RBP10.7□□□□□ -0.7
MITF-201ENST00000314557 WDR97A6NE52 1622 aa10.69□□□□□ -0.7
MITF-201ENST00000314557 PIP4P2Q8N4L2 257 aa10.67□□□□□ -0.7
MITF-201ENST00000314557 THOC2Q8NI27 1593 aaKnown RBP10.67□□□□□ -0.7
MITF-201ENST00000314557 FANCD2Q9BXW9 1451 aa10.67□□□□□ -0.7
MITF-201ENST00000314557 ANP32CO43423 234 aa10.67□□□□□ -0.7
MITF-201ENST00000314557 SP7Q8TDD2 431 aaPredicted RBP10.67□□□□□ -0.7
MITF-201ENST00000314557 KIF21AQ7Z4S6 1674 aa10.65□□□□□ -0.7
MITF-201ENST00000314557 PITPNM1O00562 1244 aa10.65□□□□□ -0.71
MITF-201ENST00000314557 TONSLQ96HA7 1378 aa10.64□□□□□ -0.71
MITF-201ENST00000314557 FGD6Q6ZV73 1430 aa10.64□□□□□ -0.71
MITF-201ENST00000314557 PPP1R15AO75807 674 aaPredicted RBP10.64□□□□□ -0.71
MITF-201ENST00000314557 TSHZ2Q9NRE2 1034 aa10.63□□□□□ -0.71
MITF-201ENST00000314557 UACAQ9BZF9 1416 aa10.63□□□□□ -0.71
MITF-201ENST00000314557 DDX10Q13206 875 aaKnown RBP10.62□□□□□ -0.71
MITF-201ENST00000314557 FHOD3Q2V2M9 1422 aa10.62□□□□□ -0.71
MITF-201ENST00000314557 CCDC18Q5T9S5 1454 aa10.62□□□□□ -0.71
MITF-201ENST00000314557 TOPBP1Q92547 1522 aa10.62□□□□□ -0.71
MITF-201ENST00000314557 HFM1A2PYH4 1435 aa10.62□□□□□ -0.71
MITF-201ENST00000314557 FXR2P51116 673 aaKnown RBP eCLIP10.62□□□□□ -0.71
MITF-201ENST00000314557 SPDYE2BA6NHP3 402 aa10.61□□□□□ -0.71
MITF-201ENST00000314557 SPDYE6P0CI01 402 aa10.61□□□□□ -0.71
MITF-201ENST00000314557 SPDYE2Q495Y8 402 aa10.61□□□□□ -0.71
MITF-201ENST00000314557 SUPT6HQ7KZ85 1726 aaKnown RBP10.61□□□□□ -0.71
MITF-201ENST00000314557 EHBP1L1Q8N3D4 1523 aa10.61□□□□□ -0.71
MITF-201ENST00000314557 MTUS2Q5JR59 1369 aa10.6□□□□□ -0.71
MITF-201ENST00000314557 FBLN2P98095 1184 aa10.6□□□□□ -0.71
MITF-201ENST00000314557 ATP1B4Q9UN42 357 aaPredicted RBP10.6□□□□□ -0.71
MITF-201ENST00000314557 POLA1P09884 1462 aaPredicted RBP10.6□□□□□ -0.71
MITF-201ENST00000314557 PTPN23Q9H3S7 1636 aa10.6□□□□□ -0.71
MITF-201ENST00000314557 SIN3AQ96ST3 1273 aa10.6□□□□□ -0.71
MITF-201ENST00000314557 SAMD9Q5K651 1589 aa10.59□□□□□ -0.71
MITF-201ENST00000314557 ANP32EQ9BTT0 268 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms