RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 SHROOM2Q13796 1616 aa21.64■■□□□ 1.05
CKS2-201ENST00000314355 ERCC6L2Q5T890 1561 aa21.63■■□□□ 1.05
CKS2-201ENST00000314355 CUL7Q14999 1698 aa21.63■■□□□ 1.05
CKS2-201ENST00000314355 KIAA0586Q9BVV6 1533 aa21.6■■□□□ 1.05
CKS2-201ENST00000314355 RUSC2Q8N2Y8 1516 aa21.55■■□□□ 1.04
CKS2-201ENST00000314355 CARMIL2Q6F5E8 1435 aa21.49■■□□□ 1.03
CKS2-201ENST00000314355 TTBK1Q5TCY1 1321 aaPredicted RBP21.49■■□□□ 1.03
CKS2-201ENST00000314355 RAPGEF2Q9Y4G8 1499 aa21.45■■□□□ 1.02
CKS2-201ENST00000314355 PTPRGP23470 1445 aa21.44■■□□□ 1.02
CKS2-201ENST00000314355 TNIKQ9UKE5 1360 aa21.4■■□□□ 1.02
CKS2-201ENST00000314355 FAM69CQ0P6D2 419 aa21.4■■□□□ 1.02
CKS2-201ENST00000314355 FAM9AQ8IZU1 332 aaPredicted RBP21.38■■□□□ 1.01
CKS2-201ENST00000314355 IQGAP2Q13576 1575 aa21.36■■□□□ 1.01
CKS2-201ENST00000314355 MAPKBP1O60336 1514 aa21.29■■□□□ 1
CKS2-201ENST00000314355 ABCC10Q5T3U5 1492 aa21.28■■□□□ 1
CKS2-201ENST00000314355 ADCY10Q96PN6 1610 aa21.27■■□□□ 1
CKS2-201ENST00000314355 AEBP2Q6ZN18 517 aaPredicted RBP21.27■■□□□ 1
CKS2-201ENST00000314355 CSRNP3Q8WYN3 585 aa21.25■□□□□ 0.99
CKS2-201ENST00000314355 UACAQ9BZF9 1416 aa21.24■□□□□ 0.99
CKS2-201ENST00000314355 UGGT2Q9NYU1 1516 aa21.22■□□□□ 0.99
CKS2-201ENST00000314355 GOLGA3Q08378 1498 aa21.21■□□□□ 0.99
CKS2-201ENST00000314355 ABCC2Q92887 1545 aa21.21■□□□□ 0.99
CKS2-201ENST00000314355 DISP1Q96F81 1524 aa21.21■□□□□ 0.99
CKS2-201ENST00000314355 KIF13AQ9H1H9 1805 aa21.2■□□□□ 0.98
CKS2-201ENST00000314355 PRXQ9BXM0 1461 aa21.19■□□□□ 0.98
CKS2-201ENST00000314355 UHRF1BP1LA0JNW5 1464 aa21.18■□□□□ 0.98
CKS2-201ENST00000314355 PLB1Q6P1J6 1458 aa21.17■□□□□ 0.98
CKS2-201ENST00000314355 DIP2BQ9P265 1576 aa21.14■□□□□ 0.98
CKS2-201ENST00000314355 EEA1Q15075 1411 aa21.14■□□□□ 0.98
CKS2-201ENST00000314355 ASXL2Q76L83 1435 aa21.13■□□□□ 0.97
CKS2-201ENST00000314355 KIAA0556O60303 1618 aa21.13■□□□□ 0.97
CKS2-201ENST00000314355 CTTNBP2Q8WZ74 1663 aa21.12■□□□□ 0.97
CKS2-201ENST00000314355 P3H3Q8IVL6 736 aa21.08■□□□□ 0.97
CKS2-201ENST00000314355 KDM5BQ9UGL1 1544 aa21.07■□□□□ 0.96
CKS2-201ENST00000314355 TSPOAP1O95153 1857 aa21.03■□□□□ 0.96
CKS2-201ENST00000314355 RANGAP1P46060 587 aaPredicted RBP21.02■□□□□ 0.96
CKS2-201ENST00000314355 KCNH8Q96L42 1107 aa21.02■□□□□ 0.96
CKS2-201ENST00000314355 GLI2P10070 1586 aa21■□□□□ 0.95
CKS2-201ENST00000314355 KDM6BO15054 1643 aa21■□□□□ 0.95
CKS2-201ENST00000314355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.99■□□□□ 0.95
CKS2-201ENST00000314355 HNRNPUL2Q1KMD3 747 aaKnown RBP20.99■□□□□ 0.95
CKS2-201ENST00000314355 EPRSP07814 1512 aaKnown RBP20.98■□□□□ 0.95
CKS2-201ENST00000314355 ZCCHC11Q5TAX3 1644 aaKnown RBP20.97■□□□□ 0.95
CKS2-201ENST00000314355 CHIC1Q5VXU3 224 aa20.95■□□□□ 0.94
CKS2-201ENST00000314355 TEX14Q8IWB6 1497 aa20.94■□□□□ 0.94
CKS2-201ENST00000314355 WDR7Q9Y4E6 1490 aa20.94■□□□□ 0.94
CKS2-201ENST00000314355 ARID3CA6NKF2 412 aa20.93■□□□□ 0.94
CKS2-201ENST00000314355 UBTFP17480 764 aaKnown RBP20.93■□□□□ 0.94
CKS2-201ENST00000314355 ABCA8O94911 1581 aa20.92■□□□□ 0.94
CKS2-201ENST00000314355 EHMT2Q96KQ7 1210 aa20.88■□□□□ 0.93
CKS2-201ENST00000314355 CD109Q6YHK3 1445 aa20.87■□□□□ 0.93
CKS2-201ENST00000314355 MAP3K4Q9Y6R4 1608 aa20.83■□□□□ 0.93
CKS2-201ENST00000314355 ATP10BO94823 1461 aa20.82■□□□□ 0.92
CKS2-201ENST00000314355 SAMD9Q5K651 1589 aa20.82■□□□□ 0.92
CKS2-201ENST00000314355 PLEKHD1A6NEE1 506 aa20.82■□□□□ 0.92
CKS2-201ENST00000314355 KIF21BO75037 1637 aa20.82■□□□□ 0.92
CKS2-201ENST00000314355 FHOD3Q2V2M9 1422 aa20.78■□□□□ 0.92
CKS2-201ENST00000314355 PPRC1Q5VV67 1664 aaKnown RBP20.78■□□□□ 0.92
CKS2-201ENST00000314355 RAPGEF6Q8TEU7 1601 aa20.78■□□□□ 0.92
CKS2-201ENST00000314355 ATP1B4Q9UN42 357 aaPredicted RBP20.77■□□□□ 0.92
CKS2-201ENST00000314355 MAGI3Q5TCQ9 1506 aa20.77■□□□□ 0.92
CKS2-201ENST00000314355 CFAP43Q8NDM7 1665 aa20.77■□□□□ 0.91
CKS2-201ENST00000314355 EFCAB5A4FU69 1503 aa20.74■□□□□ 0.91
CKS2-201ENST00000314355 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
CKS2-201ENST00000314355 KDM4FA0A1W2PPD8 638 aa20.72■□□□□ 0.91
CKS2-201ENST00000314355 COL17A1Q9UMD9 1497 aaPredicted RBP20.72■□□□□ 0.91
CKS2-201ENST00000314355 CDK11AQ9UQ88 783 aaPredicted RBP20.68■□□□□ 0.9
CKS2-201ENST00000314355 NUP153P49790 1475 aaKnown RBP20.68■□□□□ 0.9
CKS2-201ENST00000314355 FMN1Q68DA7 1419 aa20.66■□□□□ 0.9
CKS2-201ENST00000314355 ABCA9Q8IUA7 1624 aa20.61■□□□□ 0.89
CKS2-201ENST00000314355 ARAP3Q8WWN8 1544 aa20.6■□□□□ 0.89
CKS2-201ENST00000314355 NEO1Q92859 1461 aa20.59■□□□□ 0.89
CKS2-201ENST00000314355 ADGRL1O94910 1474 aa20.57■□□□□ 0.88
CKS2-201ENST00000314355 RAPGEF3O95398 923 aa20.57■□□□□ 0.88
CKS2-201ENST00000314355 ARHGAP35Q9NRY4 1499 aa20.56■□□□□ 0.88
CKS2-201ENST00000314355 ARID4BQ4LE39 1312 aaPredicted RBP20.52■□□□□ 0.87
CKS2-201ENST00000314355 HECW1Q76N89 1606 aa20.51■□□□□ 0.87
CKS2-201ENST00000314355 AKNAQ7Z591 1439 aa20.5■□□□□ 0.87
CKS2-201ENST00000314355 FANCAO15360 1455 aa20.49■□□□□ 0.87
CKS2-201ENST00000314355 CDK13Q14004 1512 aaKnown RBP20.48■□□□□ 0.87
CKS2-201ENST00000314355 EFCAB2Q5VUJ9 269 aa20.48■□□□□ 0.87
CKS2-201ENST00000314355 DENND4BO75064 1496 aaPredicted RBP20.48■□□□□ 0.87
CKS2-201ENST00000314355 CLIP1P30622 1438 aa20.47■□□□□ 0.87
CKS2-201ENST00000314355 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.47■□□□□ 0.876e-7■■■■■ 30.4
CKS2-201ENST00000314355 CFAP74Q9C0B2 1584 aa20.45■□□□□ 0.86
CKS2-201ENST00000314355 PLCH2O75038 1416 aa20.44■□□□□ 0.86
CKS2-201ENST00000314355 MYT1LQ9UL68 1186 aa20.41■□□□□ 0.86
CKS2-201ENST00000314355 TROQ12816 1431 aaPredicted RBP20.4■□□□□ 0.86
CKS2-201ENST00000314355 CASKIN1Q8WXD9 1431 aa20.39■□□□□ 0.85
CKS2-201ENST00000314355 SCAPERQ9BY12 1400 aa20.38■□□□□ 0.85
CKS2-201ENST00000314355 TTC37Q6PGP7 1564 aa20.38■□□□□ 0.85
CKS2-201ENST00000314355 CCDC18Q5T9S5 1454 aa20.37■□□□□ 0.85
CKS2-201ENST00000314355 POGZQ7Z3K3 1410 aa20.35■□□□□ 0.85
CKS2-201ENST00000314355 KIF14Q15058 1648 aa20.35■□□□□ 0.85
CKS2-201ENST00000314355 MAGI2Q86UL8 1455 aa20.32■□□□□ 0.84
CKS2-201ENST00000314355 ARHGAP5Q13017 1502 aa20.31■□□□□ 0.84
CKS2-201ENST00000314355 MYO5CQ9NQX4 1742 aa20.3■□□□□ 0.84
CKS2-201ENST00000314355 FYCO1Q9BQS8 1478 aa20.29■□□□□ 0.84
CKS2-201ENST00000314355 FRMPD1Q5SYB0 1578 aa20.29■□□□□ 0.84
CKS2-201ENST00000314355 ZFYVE16Q7Z3T8 1539 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms