RNA–Protein interactions for RNA: ENST00000313352.11

PUF60-201, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUF60, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-201ENST00000313352 FAM9AQ8IZU1 332 aaPredicted RBP28.8■■■□□ 2.2
PUF60-201ENST00000313352 SHROOM2Q13796 1616 aa28.79■■■□□ 2.2
PUF60-201ENST00000313352 RAPGEF2Q9Y4G8 1499 aa28.79■■■□□ 2.2
PUF60-201ENST00000313352 JPH4Q96JJ6 628 aa28.78■■■□□ 2.2
PUF60-201ENST00000313352 KIAA0586Q9BVV6 1533 aa28.74■■■□□ 2.19
PUF60-201ENST00000313352 PRXQ9BXM0 1461 aa28.73■■■□□ 2.19
PUF60-201ENST00000313352 CSRNP3Q8WYN3 585 aa28.73■■■□□ 2.19
PUF60-201ENST00000313352 PRG4Q92954 1404 aaPredicted RBP28.72■■■□□ 2.19
PUF60-201ENST00000313352 EEA1Q15075 1411 aa28.62■■■□□ 2.17
PUF60-201ENST00000313352 IQGAP2Q13576 1575 aa28.6■■■□□ 2.17
PUF60-201ENST00000313352 EHMT2Q96KQ7 1210 aa28.53■■■□□ 2.16
PUF60-201ENST00000313352 CTTNBP2Q8WZ74 1663 aa28.51■■■□□ 2.16
PUF60-201ENST00000313352 TTBK1Q5TCY1 1321 aaPredicted RBP28.47■■■□□ 2.15
PUF60-201ENST00000313352 DISP1Q96F81 1524 aa28.46■■■□□ 2.15
PUF60-201ENST00000313352 UGGT2Q9NYU1 1516 aa28.44■■■□□ 2.14
PUF60-201ENST00000313352 KIF21BO75037 1637 aa28.41■■■□□ 2.14
PUF60-201ENST00000313352 CARMIL2Q6F5E8 1435 aa28.39■■■□□ 2.13
PUF60-201ENST00000313352 KIAA0556O60303 1618 aa28.35■■■□□ 2.13
PUF60-201ENST00000313352 TNIKQ9UKE5 1360 aa28.34■■■□□ 2.13
PUF60-201ENST00000313352 PTPRGP23470 1445 aa28.34■■■□□ 2.13
PUF60-201ENST00000313352 RANGAP1P46060 587 aaPredicted RBP28.33■■■□□ 2.13
PUF60-201ENST00000313352 ADCY10Q96PN6 1610 aa28.29■■■□□ 2.12
PUF60-201ENST00000313352 P3H3Q8IVL6 736 aa28.28■■■□□ 2.12
PUF60-201ENST00000313352 UBTFP17480 764 aaKnown RBP28.25■■■□□ 2.11
PUF60-201ENST00000313352 GOLGA3Q08378 1498 aa28.24■■■□□ 2.11
PUF60-201ENST00000313352 TRHP20396 242 aaPredicted RBP28.22■■■□□ 2.11
PUF60-201ENST00000313352 SAMD9Q5K651 1589 aa28.17■■■□□ 2.1
PUF60-201ENST00000313352 UACAQ9BZF9 1416 aa28.15■■■□□ 2.1
PUF60-201ENST00000313352 PLB1Q6P1J6 1458 aa28.14■■■□□ 2.1
PUF60-201ENST00000313352 ABCC2Q92887 1545 aa28.09■■■□□ 2.09
PUF60-201ENST00000313352 FHOD3Q2V2M9 1422 aa28.09■■■□□ 2.09
PUF60-201ENST00000313352 NPM1P06748 294 aaKnown RBP eCLIP28.08■■■□□ 2.09
PUF60-201ENST00000313352 UHRF1BP1LA0JNW5 1464 aa28.08■■■□□ 2.08
PUF60-201ENST00000313352 ABCA8O94911 1581 aa28.04■■■□□ 2.08
PUF60-201ENST00000313352 MAPKBP1O60336 1514 aa28.01■■■□□ 2.07
PUF60-201ENST00000313352 ARID3CA6NKF2 412 aa27.99■■■□□ 2.07
PUF60-201ENST00000313352 ARHGAP35Q9NRY4 1499 aa27.98■■■□□ 2.07
PUF60-201ENST00000313352 KDM5BQ9UGL1 1544 aa27.98■■■□□ 2.07
PUF60-201ENST00000313352 EFCAB5A4FU69 1503 aa27.97■■■□□ 2.07
PUF60-201ENST00000313352 ZCCHC11Q5TAX3 1644 aaKnown RBP27.97■■■□□ 2.07
PUF60-201ENST00000313352 KIF13AQ9H1H9 1805 aa27.95■■■□□ 2.06
PUF60-201ENST00000313352 LOC105371045A0A1W2PR82 267 aa27.94■■■□□ 2.06
PUF60-201ENST00000313352 ASXL2Q76L83 1435 aa27.93■■■□□ 2.06
PUF60-201ENST00000313352 ABCC10Q5T3U5 1492 aa27.92■■■□□ 2.06
PUF60-201ENST00000313352 FAM69CQ0P6D2 419 aa27.91■■■□□ 2.06
PUF60-201ENST00000313352 DIP2BQ9P265 1576 aa27.89■■■□□ 2.06
PUF60-201ENST00000313352 RAPGEF6Q8TEU7 1601 aa27.89■■■□□ 2.06
PUF60-201ENST00000313352 ATP10BO94823 1461 aa27.85■■■□□ 2.05
PUF60-201ENST00000313352 NUP153P49790 1475 aaKnown RBP27.83■■■□□ 2.05
PUF60-201ENST00000313352 CLIP1P30622 1438 aa27.78■■■□□ 2.04
PUF60-201ENST00000313352 WDR7Q9Y4E6 1490 aa27.76■■■□□ 2.03
PUF60-201ENST00000313352 EPRSP07814 1512 aaKnown RBP27.76■■■□□ 2.03
PUF60-201ENST00000313352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.74■■■□□ 2.03
PUF60-201ENST00000313352 HNRNPUL2Q1KMD3 747 aaKnown RBP27.74■■■□□ 2.03
PUF60-201ENST00000313352 KCNH8Q96L42 1107 aa27.74■■■□□ 2.03
PUF60-201ENST00000313352 ATP1B4Q9UN42 357 aaPredicted RBP27.73■■■□□ 2.03
PUF60-201ENST00000313352 FMN1Q68DA7 1419 aa27.72■■■□□ 2.03
PUF60-201ENST00000313352 TSPOAP1O95153 1857 aa27.72■■■□□ 2.03
PUF60-201ENST00000313352 CDK13Q14004 1512 aaKnown RBP27.69■■■□□ 2.02
PUF60-201ENST00000313352 CEP162Q5TB80 1403 aa27.69■■■□□ 2.02
PUF60-201ENST00000313352 GLI2P10070 1586 aa27.68■■■□□ 2.02
PUF60-201ENST00000313352 PCF11O94913 1555 aaKnown RBP27.63■■■□□ 2.01
PUF60-201ENST00000313352 LRRIQ1Q96JM4 1722 aa27.63■■■□□ 2.01
PUF60-201ENST00000313352 PPRC1Q5VV67 1664 aaKnown RBP27.62■■■□□ 2.01
PUF60-201ENST00000313352 HECW1Q76N89 1606 aa27.61■■■□□ 2.01
PUF60-201ENST00000313352 MAP3K4Q9Y6R4 1608 aa27.61■■■□□ 2.01
PUF60-201ENST00000313352 CASKIN1Q8WXD9 1431 aa27.56■■■□□ 2
PUF60-201ENST00000313352 PLEKHD1A6NEE1 506 aa27.55■■■□□ 2
PUF60-201ENST00000313352 CD109Q6YHK3 1445 aa27.52■■■□□ 2
PUF60-201ENST00000313352 CFAP43Q8NDM7 1665 aa27.49■■□□□ 1.99
PUF60-201ENST00000313352 FYCO1Q9BQS8 1478 aa27.47■■□□□ 1.99
PUF60-201ENST00000313352 ABCA9Q8IUA7 1624 aa27.47■■□□□ 1.99
PUF60-201ENST00000313352 COL17A1Q9UMD9 1497 aaPredicted RBP27.43■■□□□ 1.98
PUF60-201ENST00000313352 MAGI3Q5TCQ9 1506 aa27.42■■□□□ 1.98
PUF60-201ENST00000313352 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.42■■□□□ 1.986e-10■■□□□ 13
PUF60-201ENST00000313352 KDM6BO15054 1643 aa27.41■■□□□ 1.98
PUF60-201ENST00000313352 TTC37Q6PGP7 1564 aa27.4■■□□□ 1.98
PUF60-201ENST00000313352 KIF14Q15058 1648 aa27.39■■□□□ 1.98
PUF60-201ENST00000313352 CCDC18Q5T9S5 1454 aa27.39■■□□□ 1.97
PUF60-201ENST00000313352 TEX14Q8IWB6 1497 aa27.38■■□□□ 1.97
PUF60-201ENST00000313352 TROQ12816 1431 aaPredicted RBP27.37■■□□□ 1.97
PUF60-201ENST00000313352 CDK11AQ9UQ88 783 aaPredicted RBP27.37■■□□□ 1.97
PUF60-201ENST00000313352 VPS8Q8N3P4 1428 aa27.32■■□□□ 1.96
PUF60-201ENST00000313352 PLCH2O75038 1416 aa27.22■■□□□ 1.95
PUF60-201ENST00000313352 FANCAO15360 1455 aa27.21■■□□□ 1.95
PUF60-201ENST00000313352 NEO1Q92859 1461 aa27.19■■□□□ 1.94
PUF60-201ENST00000313352 RAPGEF3O95398 923 aa27.18■■□□□ 1.94
PUF60-201ENST00000313352 MTUS2Q5JR59 1369 aa27.18■■□□□ 1.94
PUF60-201ENST00000313352 MYO5CQ9NQX4 1742 aa27.18■■□□□ 1.94
PUF60-201ENST00000313352 ARAP3Q8WWN8 1544 aa27.18■■□□□ 1.94
PUF60-201ENST00000313352 AKNAQ7Z591 1439 aa27.17■■□□□ 1.94
PUF60-201ENST00000313352 TIAM1Q13009 1591 aa27.15■■□□□ 1.94
PUF60-201ENST00000313352 CDC42BPBQ9Y5S2 1711 aa27.14■■□□□ 1.93
PUF60-201ENST00000313352 KANK4Q5T7N3 995 aaPredicted RBP27.11■■□□□ 1.93
PUF60-201ENST00000313352 CDC42BPAQ5VT25 1732 aa27.11■■□□□ 1.93
PUF60-201ENST00000313352 ARHGAP5Q13017 1502 aa27.11■■□□□ 1.93
PUF60-201ENST00000313352 FRMPD1Q5SYB0 1578 aa27.11■■□□□ 1.93
PUF60-201ENST00000313352 PHLDB1Q86UU1 1377 aa27.1■■□□□ 1.93
PUF60-201ENST00000313352 EHBP1L1Q8N3D4 1523 aa27.1■■□□□ 1.93
PUF60-201ENST00000313352 EFCAB2Q5VUJ9 269 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms