RNA–Protein interactions for RNA: ENST00000313116.11

ZNF41-201, Transcript of zinc finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF41, Length 4,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF41-201ENST00000313116 CARMIL1Q5VZK9 1371 aa13.3□□□□□ -0.28
ZNF41-201ENST00000313116 EIF4G2P78344 907 aaKnown RBP eCLIP13.3□□□□□ -0.28
ZNF41-201ENST00000313116 CUX2O14529 1486 aa13.3□□□□□ -0.28
ZNF41-201ENST00000313116 SALL2Q9Y467 1007 aaPredicted RBP13.27□□□□□ -0.28
ZNF41-201ENST00000313116 RAB3GAP2Q9H2M9 1393 aa13.26□□□□□ -0.29
ZNF41-201ENST00000313116 SENP3-EIF4A1A0A087X0R7 540 aa13.25□□□□□ -0.29
ZNF41-201ENST00000313116 SMARCA2P51531 1590 aa13.25□□□□□ -0.29
ZNF41-201ENST00000313116 DHX57Q6P158 1386 aaKnown RBP13.24□□□□□ -0.29
ZNF41-201ENST00000313116 SETD5Q9C0A6 1442 aa13.23□□□□□ -0.29
ZNF41-201ENST00000313116 ATAD2BQ9ULI0 1458 aa13.22□□□□□ -0.29
ZNF41-201ENST00000313116 TMC1Q8TDI8 760 aa13.22□□□□□ -0.29
ZNF41-201ENST00000313116 KCNH8Q96L42 1107 aa13.22□□□□□ -0.29
ZNF41-201ENST00000313116 KDM2AQ9Y2K7 1162 aa13.22□□□□□ -0.29
ZNF41-201ENST00000313116 NPM2Q86SE8 214 aaKnown RBP13.22□□□□□ -0.29
ZNF41-201ENST00000313116 FHAD1B1AJZ9 1412 aa13.21□□□□□ -0.29
ZNF41-201ENST00000313116 ANP32AP39687 249 aaKnown RBP13.21□□□□□ -0.3
ZNF41-201ENST00000313116 CCDC136Q96JN2 1154 aa13.19□□□□□ -0.3
ZNF41-201ENST00000313116 ANP32EQ9BTT0 268 aa13.17□□□□□ -0.3
ZNF41-201ENST00000313116 TIMELESSQ9UNS1 1208 aa13.17□□□□□ -0.3
ZNF41-201ENST00000313116 PPP1R15AO75807 674 aaPredicted RBP13.14□□□□□ -0.31
ZNF41-201ENST00000313116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.14□□□□□ -0.31
ZNF41-201ENST00000313116 TSPY4P0CV99 314 aa13.13□□□□□ -0.31
ZNF41-201ENST00000313116 TSPY10P0CW01 314 aa13.13□□□□□ -0.31
ZNF41-201ENST00000313116 NBR1Q14596 966 aa13.12□□□□□ -0.31
ZNF41-201ENST00000313116 CCER2I3L3R5 266 aa13.12□□□□□ -0.31
ZNF41-201ENST00000313116 TSHZ2Q9NRE2 1034 aa13.12□□□□□ -0.31
ZNF41-201ENST00000313116 FOXD1Q16676 465 aa13.11□□□□□ -0.31
ZNF41-201ENST00000313116 CHMP7Q8WUX9 453 aaPredicted RBP13.11□□□□□ -0.31
ZNF41-201ENST00000313116 ARHGAP35Q9NRY4 1499 aa13.1□□□□□ -0.31
ZNF41-201ENST00000313116 CFDP1Q9UEE9 299 aaPredicted RBP13.09□□□□□ -0.31
ZNF41-201ENST00000313116 HSPA5P11021 654 aaKnown RBP13.09□□□□□ -0.31
ZNF41-201ENST00000313116 FHOD3Q2V2M9 1422 aa13.08□□□□□ -0.32
ZNF41-201ENST00000313116 RBM19Q9Y4C8 960 aaKnown RBP13.08□□□□□ -0.32
ZNF41-201ENST00000313116 KIF21BO75037 1637 aa13.07□□□□□ -0.32
ZNF41-201ENST00000313116 B4GALNT3Q6L9W6 998 aa13.07□□□□□ -0.32
ZNF41-201ENST00000313116 TDRD9Q8NDG6 1382 aaKnown RBP13.07□□□□□ -0.32
ZNF41-201ENST00000313116 RGL3Q3MIN7 710 aa13.06□□□□□ -0.32
ZNF41-201ENST00000313116 CANXP27824 592 aaKnown RBP13.06□□□□□ -0.32
ZNF41-201ENST00000313116 PPP4R2Q9NY27 417 aa13.04□□□□□ -0.32
ZNF41-201ENST00000313116 ZBTB47Q9UFB7 747 aaPredicted RBP13.04□□□□□ -0.32
ZNF41-201ENST00000313116 CADPSQ9ULU8 1353 aa13.03□□□□□ -0.32
ZNF41-201ENST00000313116 CARD11Q9BXL7 1154 aa13.03□□□□□ -0.32
ZNF41-201ENST00000313116 SYNJ1O43426 1573 aa13.03□□□□□ -0.32
ZNF41-201ENST00000313116 PLEKHD1A6NEE1 506 aa13.02□□□□□ -0.32
ZNF41-201ENST00000313116 IGF1RP08069 1367 aa13.01□□□□□ -0.33
ZNF41-201ENST00000313116 EIF4G1Q04637 1599 aaKnown RBP13.01□□□□□ -0.33
ZNF41-201ENST00000313116 MPHOSPH9Q99550 1183 aa13□□□□□ -0.33
ZNF41-201ENST00000313116 ARAP1Q96P48 1450 aa12.99□□□□□ -0.33
ZNF41-201ENST00000313116 FMN1Q68DA7 1419 aa12.99□□□□□ -0.33
ZNF41-201ENST00000313116 L3MBTL2Q969R5 705 aa12.98□□□□□ -0.33
ZNF41-201ENST00000313116 CHGAP10645 457 aaKnown RBP12.98□□□□□ -0.33
ZNF41-201ENST00000313116 BCL11AQ9H165 835 aa12.96□□□□□ -0.33
ZNF41-201ENST00000313116 PHLDB1Q86UU1 1377 aa12.96□□□□□ -0.33
ZNF41-201ENST00000313116 WDR43Q15061 677 aaKnown RBP eCLIP12.96□□□□□ -0.34
ZNF41-201ENST00000313116 DCAF11Q8TEB1 546 aa12.93□□□□□ -0.34
ZNF41-201ENST00000313116 PKD2Q13563 968 aa12.92□□□□□ -0.34
ZNF41-201ENST00000313116 PRXQ9BXM0 1461 aa12.9□□□□□ -0.34
ZNF41-201ENST00000313116 RRBP1Q9P2E9 1410 aaKnown RBP12.9□□□□□ -0.34
ZNF41-201ENST00000313116 CC2D1BQ5T0F9 858 aaKnown RBP12.88□□□□□ -0.35
ZNF41-201ENST00000313116 FGD5Q6ZNL6 1462 aa12.88□□□□□ -0.35
ZNF41-201ENST00000313116 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.88□□□□□ -0.35
ZNF41-201ENST00000313116 LRRC9Q6ZRR7 1453 aa12.87□□□□□ -0.35
ZNF41-201ENST00000313116 CCDC18Q5T9S5 1454 aa12.86□□□□□ -0.35
ZNF41-201ENST00000313116 NOP58Q9Y2X3 529 aaKnown RBP12.86□□□□□ -0.35
ZNF41-201ENST00000313116 FANCD2Q9BXW9 1451 aa12.86□□□□□ -0.35
ZNF41-201ENST00000313116 ERICH3Q5RHP9 1530 aa12.85□□□□□ -0.35
ZNF41-201ENST00000313116 NCAPD3P42695 1498 aa12.85□□□□□ -0.35
ZNF41-201ENST00000313116 RAD54L2Q9Y4B4 1467 aa12.85□□□□□ -0.35
ZNF41-201ENST00000313116 PRKRIP1Q9H875 184 aaPredicted RBP12.84□□□□□ -0.35
ZNF41-201ENST00000313116 KNSTRNQ9Y448 316 aa12.84□□□□□ -0.35
ZNF41-201ENST00000313116 SENP3Q9H4L4 574 aaPredicted RBP12.83□□□□□ -0.36
ZNF41-201ENST00000313116 FGD6Q6ZV73 1430 aa12.82□□□□□ -0.36
ZNF41-201ENST00000313116 PDS5BQ9NTI5 1447 aa12.82□□□□□ -0.36
ZNF41-201ENST00000313116 ERICH6BQ5W0A0 696 aa12.82□□□□□ -0.36
ZNF41-201ENST00000313116 LAS1LQ9Y4W2 734 aaKnown RBP12.82□□□□□ -0.36
ZNF41-201ENST00000313116 NEFMP07197 916 aa12.81□□□□□ -0.36
ZNF41-201ENST00000313116 NUP155O75694 1391 aa12.81□□□□□ -0.36
ZNF41-201ENST00000313116 TOP2BQ02880 1626 aa12.81□□□□□ -0.36
ZNF41-201ENST00000313116 UPF2Q9HAU5 1272 aaKnown RBP12.79□□□□□ -0.36
ZNF41-201ENST00000313116 CUX1P39880 1505 aa12.79□□□□□ -0.36
ZNF41-201ENST00000313116 CFTRP13569 1480 aa12.79□□□□□ -0.36
ZNF41-201ENST00000313116 NEUROD2Q15784 382 aa12.77□□□□□ -0.37
ZNF41-201ENST00000313116 NUDCQ9Y266 331 aa12.77□□□□□ -0.37
ZNF41-201ENST00000313116 RGS3P49796 1198 aa12.77□□□□□ -0.37
ZNF41-201ENST00000313116 UACAQ9BZF9 1416 aa12.76□□□□□ -0.37
ZNF41-201ENST00000313116 WASHC2AQ641Q2 1341 aa12.76□□□□□ -0.37
ZNF41-201ENST00000313116 ARXQ96QS3 562 aa12.76□□□□□ -0.37
ZNF41-201ENST00000313116 ZNF644Q9H582 1327 aaPredicted RBP12.76□□□□□ -0.37
ZNF41-201ENST00000313116 EIF5BO60841 1220 aaKnown RBP12.76□□□□□ -0.37
ZNF41-201ENST00000313116 TMF1P82094 1093 aa12.75□□□□□ -0.37
ZNF41-201ENST00000313116 RCAN3Q9UKA8 241 aa12.74□□□□□ -0.37
ZNF41-201ENST00000313116 ST20-MTHFSA0A0A6YYL1 179 aa12.74□□□□□ -0.37
ZNF41-201ENST00000313116 DEKP35659 375 aaKnown RBP12.74□□□□□ -0.37
ZNF41-201ENST00000313116 MYOM3Q5VTT5 1437 aa12.74□□□□□ -0.37
ZNF41-201ENST00000313116 ANKRD30AQ9BXX3 1397 aa12.74□□□□□ -0.37
ZNF41-201ENST00000313116 HNRNPMP52272 730 aaKnown RBP eCLIP12.74□□□□□ -0.37
ZNF41-201ENST00000313116 CDCA8Q53HL2 280 aa12.74□□□□□ -0.37
ZNF41-201ENST00000313116 TNNT2P45379 298 aaPredicted RBP12.73□□□□□ -0.37
ZNF41-201ENST00000313116 DDRGK1Q96HY6 314 aa12.73□□□□□ -0.37
ZNF41-201ENST00000313116 CASKIN1Q8WXD9 1431 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms