RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 KIAA0586Q9BVV6 1533 aa25.12■■□□□ 1.61
PPP1CA-201ENST00000312989 PRG4Q92954 1404 aaPredicted RBP25.11■■□□□ 1.61
PPP1CA-201ENST00000312989 JPH4Q96JJ6 628 aa25.11■■□□□ 1.61
PPP1CA-201ENST00000312989 RAPGEF2Q9Y4G8 1499 aa24.98■■□□□ 1.59
PPP1CA-201ENST00000312989 PRXQ9BXM0 1461 aa24.93■■□□□ 1.58
PPP1CA-201ENST00000312989 IQGAP2Q13576 1575 aa24.9■■□□□ 1.58
PPP1CA-201ENST00000312989 TRHP20396 242 aaPredicted RBP24.85■■□□□ 1.57
PPP1CA-201ENST00000312989 DISP1Q96F81 1524 aa24.85■■□□□ 1.57
PPP1CA-201ENST00000312989 UGGT2Q9NYU1 1516 aa24.82■■□□□ 1.56
PPP1CA-201ENST00000312989 ADCY10Q96PN6 1610 aa24.81■■□□□ 1.56
PPP1CA-201ENST00000312989 TNIKQ9UKE5 1360 aa24.76■■□□□ 1.55
PPP1CA-201ENST00000312989 PTPRGP23470 1445 aa24.75■■□□□ 1.55
PPP1CA-201ENST00000312989 CARMIL2Q6F5E8 1435 aa24.75■■□□□ 1.55
PPP1CA-201ENST00000312989 CSRNP3Q8WYN3 585 aa24.72■■□□□ 1.55
PPP1CA-201ENST00000312989 KIAA0556O60303 1618 aa24.72■■□□□ 1.55
PPP1CA-201ENST00000312989 EEA1Q15075 1411 aa24.71■■□□□ 1.55
PPP1CA-201ENST00000312989 MAPKBP1O60336 1514 aa24.7■■□□□ 1.54
PPP1CA-201ENST00000312989 CTTNBP2Q8WZ74 1663 aa24.69■■□□□ 1.54
PPP1CA-201ENST00000312989 CHIC1Q5VXU3 224 aa24.68■■□□□ 1.54
PPP1CA-201ENST00000312989 UHRF1BP1LA0JNW5 1464 aa24.65■■□□□ 1.54
PPP1CA-201ENST00000312989 ABCC10Q5T3U5 1492 aa24.62■■□□□ 1.53
PPP1CA-201ENST00000312989 ABCC2Q92887 1545 aa24.61■■□□□ 1.53
PPP1CA-201ENST00000312989 UACAQ9BZF9 1416 aa24.61■■□□□ 1.53
PPP1CA-201ENST00000312989 KIF13AQ9H1H9 1805 aa24.59■■□□□ 1.53
PPP1CA-201ENST00000312989 TTBK1Q5TCY1 1321 aaPredicted RBP24.57■■□□□ 1.52
PPP1CA-201ENST00000312989 DIP2BQ9P265 1576 aa24.57■■□□□ 1.52
PPP1CA-201ENST00000312989 GOLGA3Q08378 1498 aa24.55■■□□□ 1.52
PPP1CA-201ENST00000312989 NPM1P06748 294 aaKnown RBP eCLIP24.54■■□□□ 1.52
PPP1CA-201ENST00000312989 KDM5BQ9UGL1 1544 aa24.54■■□□□ 1.52
PPP1CA-201ENST00000312989 FAM9AQ8IZU1 332 aaPredicted RBP24.52■■□□□ 1.52
PPP1CA-201ENST00000312989 KIF21BO75037 1637 aa24.51■■□□□ 1.51
PPP1CA-201ENST00000312989 PLB1Q6P1J6 1458 aa24.51■■□□□ 1.51
PPP1CA-201ENST00000312989 SAMD9Q5K651 1589 aa24.49■■□□□ 1.51
PPP1CA-201ENST00000312989 ABCA8O94911 1581 aa24.49■■□□□ 1.51
PPP1CA-201ENST00000312989 FAM69CQ0P6D2 419 aa24.48■■□□□ 1.51
PPP1CA-201ENST00000312989 ASXL2Q76L83 1435 aa24.48■■□□□ 1.51
PPP1CA-201ENST00000312989 ZCCHC11Q5TAX3 1644 aaKnown RBP24.42■■□□□ 1.5
PPP1CA-201ENST00000312989 GLI2P10070 1586 aa24.38■■□□□ 1.49
PPP1CA-201ENST00000312989 P3H3Q8IVL6 736 aa24.36■■□□□ 1.49
PPP1CA-201ENST00000312989 EPRSP07814 1512 aaKnown RBP24.36■■□□□ 1.49
PPP1CA-201ENST00000312989 WDR7Q9Y4E6 1490 aa24.3■■□□□ 1.48
PPP1CA-201ENST00000312989 FHOD3Q2V2M9 1422 aa24.3■■□□□ 1.48
PPP1CA-201ENST00000312989 PPRC1Q5VV67 1664 aaKnown RBP24.29■■□□□ 1.48
PPP1CA-201ENST00000312989 ATP10BO94823 1461 aa24.27■■□□□ 1.48
PPP1CA-201ENST00000312989 EFCAB5A4FU69 1503 aa24.27■■□□□ 1.48
PPP1CA-201ENST00000312989 MAP3K4Q9Y6R4 1608 aa24.25■■□□□ 1.47
PPP1CA-201ENST00000312989 NUP153P49790 1475 aaKnown RBP24.23■■□□□ 1.47
PPP1CA-201ENST00000312989 RAPGEF6Q8TEU7 1601 aa24.23■■□□□ 1.47
PPP1CA-201ENST00000312989 RANGAP1P46060 587 aaPredicted RBP24.22■■□□□ 1.47
PPP1CA-201ENST00000312989 TSPOAP1O95153 1857 aa24.19■■□□□ 1.46
PPP1CA-201ENST00000312989 EHMT2Q96KQ7 1210 aa24.18■■□□□ 1.46
PPP1CA-201ENST00000312989 ARHGAP35Q9NRY4 1499 aa24.18■■□□□ 1.46
PPP1CA-201ENST00000312989 ARID3CA6NKF2 412 aa24.16■■□□□ 1.46
PPP1CA-201ENST00000312989 UBTFP17480 764 aaKnown RBP24.16■■□□□ 1.46
PPP1CA-201ENST00000312989 KDM6BO15054 1643 aa24.15■■□□□ 1.46
PPP1CA-201ENST00000312989 COL17A1Q9UMD9 1497 aaPredicted RBP24.15■■□□□ 1.46
PPP1CA-201ENST00000312989 MAGI3Q5TCQ9 1506 aa24.1■■□□□ 1.45
PPP1CA-201ENST00000312989 KCNH8Q96L42 1107 aa24.07■■□□□ 1.44
PPP1CA-201ENST00000312989 CFAP43Q8NDM7 1665 aa24.07■■□□□ 1.44
PPP1CA-201ENST00000312989 CD109Q6YHK3 1445 aa24.07■■□□□ 1.44
PPP1CA-201ENST00000312989 TEX14Q8IWB6 1497 aa24.06■■□□□ 1.44
PPP1CA-201ENST00000312989 ABCA9Q8IUA7 1624 aa24.03■■□□□ 1.44
PPP1CA-201ENST00000312989 FMN1Q68DA7 1419 aa24.01■■□□□ 1.43
PPP1CA-201ENST00000312989 CDK13Q14004 1512 aaKnown RBP23.99■■□□□ 1.43
PPP1CA-201ENST00000312989 HECW1Q76N89 1606 aa23.93■■□□□ 1.42
PPP1CA-201ENST00000312989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.92■■□□□ 1.42
PPP1CA-201ENST00000312989 HNRNPUL2Q1KMD3 747 aaKnown RBP23.92■■□□□ 1.42
PPP1CA-201ENST00000312989 ARAP3Q8WWN8 1544 aa23.9■■□□□ 1.42
PPP1CA-201ENST00000312989 PLEKHD1A6NEE1 506 aa23.9■■□□□ 1.42
PPP1CA-201ENST00000312989 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.89■■□□□ 1.42
PPP1CA-201ENST00000312989 CLIP1P30622 1438 aa23.87■■□□□ 1.41
PPP1CA-201ENST00000312989 PCF11O94913 1555 aaKnown RBP23.86■■□□□ 1.41
PPP1CA-201ENST00000312989 TTC37Q6PGP7 1564 aa23.86■■□□□ 1.41
PPP1CA-201ENST00000312989 LRRIQ1Q96JM4 1722 aa23.86■■□□□ 1.41
PPP1CA-201ENST00000312989 NEO1Q92859 1461 aa23.85■■□□□ 1.41
PPP1CA-201ENST00000312989 CASKIN1Q8WXD9 1431 aa23.85■■□□□ 1.41
PPP1CA-201ENST00000312989 KDM4FA0A1W2PPD8 638 aa23.83■■□□□ 1.41
PPP1CA-201ENST00000312989 PHLDB1Q86UU1 1377 aa23.82■■□□□ 1.4
PPP1CA-201ENST00000312989 FRMPD1Q5SYB0 1578 aa23.79■■□□□ 1.4
PPP1CA-201ENST00000312989 TROQ12816 1431 aaPredicted RBP23.78■■□□□ 1.4
PPP1CA-201ENST00000312989 FYCO1Q9BQS8 1478 aa23.77■■□□□ 1.4
PPP1CA-201ENST00000312989 KIF14Q15058 1648 aa23.76■■□□□ 1.39
PPP1CA-201ENST00000312989 ATP1B4Q9UN42 357 aaPredicted RBP23.76■■□□□ 1.39
PPP1CA-201ENST00000312989 FANCAO15360 1455 aa23.74■■□□□ 1.39
PPP1CA-201ENST00000312989 PLCH2O75038 1416 aa23.74■■□□□ 1.39
PPP1CA-201ENST00000312989 CCDC18Q5T9S5 1454 aa23.73■■□□□ 1.39
PPP1CA-201ENST00000312989 CEP162Q5TB80 1403 aa23.73■■□□□ 1.39
PPP1CA-201ENST00000312989 AKNAQ7Z591 1439 aa23.72■■□□□ 1.39
PPP1CA-201ENST00000312989 RAPGEF3O95398 923 aa23.72■■□□□ 1.39
PPP1CA-201ENST00000312989 ADGRL1O94910 1474 aa23.7■■□□□ 1.38
PPP1CA-201ENST00000312989 AEBP2Q6ZN18 517 aaPredicted RBP23.7■■□□□ 1.38
PPP1CA-201ENST00000312989 CDK11AQ9UQ88 783 aaPredicted RBP23.68■■□□□ 1.38
PPP1CA-201ENST00000312989 CFAP74Q9C0B2 1584 aa23.66■■□□□ 1.38
PPP1CA-201ENST00000312989 DENND4BO75064 1496 aaPredicted RBP23.65■■□□□ 1.38
PPP1CA-201ENST00000312989 LOC105371045A0A1W2PR82 267 aa23.65■■□□□ 1.38
PPP1CA-201ENST00000312989 RICTORQ6R327 1708 aa23.65■■□□□ 1.38
PPP1CA-201ENST00000312989 ZMYM4Q5VZL5 1548 aa23.61■■□□□ 1.37
PPP1CA-201ENST00000312989 MYO5CQ9NQX4 1742 aa23.6■■□□□ 1.37
PPP1CA-201ENST00000312989 POGZQ7Z3K3 1410 aa23.59■■□□□ 1.37
PPP1CA-201ENST00000312989 SCAPERQ9BY12 1400 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms