RNA–Protein interactions for RNA: ENST00000312055.9

CKAP5-201, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 5 BASIC

Gene CKAP5, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-201ENST00000312055 PRDM2Q13029 1718 aa5.37□□□□□ -1.55
CKAP5-201ENST00000312055 BIVM-ERCC5R4GMW8 1640 aa5.36□□□□□ -1.55
CKAP5-201ENST00000312055 BCL11AQ9H165 835 aa5.36□□□□□ -1.55
CKAP5-201ENST00000312055 LMOD2Q6P5Q4 547 aa5.35□□□□□ -1.55
CKAP5-201ENST00000312055 PHF23Q9BUL5 403 aaPredicted RBP5.35□□□□□ -1.55
CKAP5-201ENST00000312055 WRNQ14191 1432 aaPredicted RBP eCLIP5.34□□□□□ -1.55
CKAP5-201ENST00000312055 EEA1Q15075 1411 aa5.34□□□□□ -1.55
CKAP5-201ENST00000312055 NEFMP07197 916 aa5.34□□□□□ -1.56
CKAP5-201ENST00000312055 BAZ1BQ9UIG0 1483 aaKnown RBP5.33□□□□□ -1.56
CKAP5-201ENST00000312055 PLEKHD1A6NEE1 506 aa5.33□□□□□ -1.56
CKAP5-201ENST00000312055 SYNJ1O43426 1573 aa5.33□□□□□ -1.56
CKAP5-201ENST00000312055 TOP2BQ02880 1626 aa5.32□□□□□ -1.56
CKAP5-201ENST00000312055 TSPY4P0CV99 314 aa5.32□□□□□ -1.56
CKAP5-201ENST00000312055 TSPY10P0CW01 314 aa5.32□□□□□ -1.56
CKAP5-201ENST00000312055 KIF21BO75037 1637 aa5.32□□□□□ -1.56
CKAP5-201ENST00000312055 ABCC8Q09428 1581 aa5.32□□□□□ -1.56
CKAP5-201ENST00000312055 CHIC2Q9UKJ5 165 aa5.31□□□□□ -1.56
CKAP5-201ENST00000312055 NPM2Q86SE8 214 aaKnown RBP5.31□□□□□ -1.56
CKAP5-201ENST00000312055 OSCARQ8IYS5 282 aa5.3□□□□□ -1.56
CKAP5-201ENST00000312055 YTHDC1Q96MU7 727 aaKnown RBP5.3□□□□□ -1.56
CKAP5-201ENST00000312055 CFTRP13569 1480 aa5.29□□□□□ -1.56
CKAP5-201ENST00000312055 DNAJC5BQ9UF47 199 aa5.29□□□□□ -1.56
CKAP5-201ENST00000312055 CCDC9Q9Y3X0 531 aaKnown RBP5.27□□□□□ -1.57
CKAP5-201ENST00000312055 NEFLP07196 543 aa5.27□□□□□ -1.57
CKAP5-201ENST00000312055 KLHL34Q8N239 644 aa5.27□□□□□ -1.57
CKAP5-201ENST00000312055 GTF3C3Q9Y5Q9 886 aa5.27□□□□□ -1.57
CKAP5-201ENST00000312055 NPHP1O15259 732 aa5.26□□□□□ -1.57
CKAP5-201ENST00000312055 PDS5BQ9NTI5 1447 aa5.26□□□□□ -1.57
CKAP5-201ENST00000312055 TNIKQ9UKE5 1360 aa5.26□□□□□ -1.57
CKAP5-201ENST00000312055 ERICH3Q5RHP9 1530 aa5.26□□□□□ -1.57
CKAP5-201ENST00000312055 PRXQ9BXM0 1461 aa5.25□□□□□ -1.57
CKAP5-201ENST00000312055 ZBTB47Q9UFB7 747 aaPredicted RBP5.25□□□□□ -1.57
CKAP5-201ENST00000312055 HRCP23327 699 aa5.25□□□□□ -1.57
CKAP5-201ENST00000312055 RUSC2Q8N2Y8 1516 aa5.25□□□□□ -1.57
CKAP5-201ENST00000312055 SOGA1O94964 1423 aa5.25□□□□□ -1.57
CKAP5-201ENST00000312055 KDM2AQ9Y2K7 1162 aa5.24□□□□□ -1.57
CKAP5-201ENST00000312055 MTUS2Q5JR59 1369 aa5.23□□□□□ -1.57
CKAP5-201ENST00000312055 MEX3CQ5U5Q3 659 aaKnown RBP5.23□□□□□ -1.57
CKAP5-201ENST00000312055 GGT6Q6P531 493 aa5.23□□□□□ -1.57
CKAP5-201ENST00000312055 CUX1P39880 1505 aa5.23□□□□□ -1.57
CKAP5-201ENST00000312055 CLSPNQ9HAW4 1339 aa5.22□□□□□ -1.57
CKAP5-201ENST00000312055 ZEB1P37275 1124 aaPredicted RBP5.22□□□□□ -1.57
CKAP5-201ENST00000312055 CFDP1Q9UEE9 299 aaPredicted RBP5.21□□□□□ -1.57
CKAP5-201ENST00000312055 CANXP27824 592 aaKnown RBP5.21□□□□□ -1.58
CKAP5-201ENST00000312055 FAM69CQ0P6D2 419 aa5.21□□□□□ -1.58
CKAP5-201ENST00000312055 CC2D2AQ9P2K1 1620 aa5.21□□□□□ -1.58
CKAP5-201ENST00000312055 CEP164Q9UPV0 1460 aa5.2□□□□□ -1.58
CKAP5-201ENST00000312055 WDR97A6NE52 1622 aa5.2□□□□□ -1.58
CKAP5-201ENST00000312055 RGL3Q3MIN7 710 aa5.2□□□□□ -1.58
CKAP5-201ENST00000312055 GOLGA3Q08378 1498 aa5.2□□□□□ -1.58
CKAP5-201ENST00000312055 POGKQ9P215 609 aa5.19□□□□□ -1.58
CKAP5-201ENST00000312055 TDRD9Q8NDG6 1382 aaKnown RBP5.19□□□□□ -1.58
CKAP5-201ENST00000312055 CEP162Q5TB80 1403 aa5.19□□□□□ -1.58
CKAP5-201ENST00000312055 HDGFP51858 240 aaKnown RBP5.19□□□□□ -1.58
CKAP5-201ENST00000312055 TRIM26Q12899 539 aaPredicted RBP5.19□□□□□ -1.58
CKAP5-201ENST00000312055 TMC1Q8TDI8 760 aa5.19□□□□□ -1.58
CKAP5-201ENST00000312055 DCAF8L1A6NGE4 600 aa5.19□□□□□ -1.58
CKAP5-201ENST00000312055 RRP7BPQ9NSQ0 103 aa5.18□□□□□ -1.58
CKAP5-201ENST00000312055 SOX12O15370 315 aa5.18□□□□□ -1.58
CKAP5-201ENST00000312055 PLCB2Q00722 1185 aa5.18□□□□□ -1.58
CKAP5-201ENST00000312055 PPM1GO15355 546 aaPredicted RBP5.17□□□□□ -1.58
CKAP5-201ENST00000312055 PAK3O75914 559 aaPredicted RBP5.16□□□□□ -1.58
CKAP5-201ENST00000312055 CARMIL2Q6F5E8 1435 aa5.16□□□□□ -1.58
CKAP5-201ENST00000312055 CENPBP07199 599 aaPredicted RBP5.16□□□□□ -1.58
CKAP5-201ENST00000312055 FKBP8Q14318 412 aa5.16□□□□□ -1.58
CKAP5-201ENST00000312055 MAP3K1Q13233 1512 aa5.16□□□□□ -1.58
CKAP5-201ENST00000312055 CADPSQ9ULU8 1353 aa5.15□□□□□ -1.58
CKAP5-201ENST00000312055 RAPGEF2Q9Y4G8 1499 aa5.15□□□□□ -1.58
CKAP5-201ENST00000312055 EID1Q9Y6B2 187 aa5.15□□□□□ -1.58
CKAP5-201ENST00000312055 CSB-PGBD3P0DP91 1061 aa5.15□□□□□ -1.59
CKAP5-201ENST00000312055 LAMC3Q9Y6N6 1575 aa5.15□□□□□ -1.59
CKAP5-201ENST00000312055 SAFB2Q14151 953 aaKnown RBP eCLIP5.14□□□□□ -1.59
CKAP5-201ENST00000312055 KIF27Q86VH2 1401 aa5.14□□□□□ -1.59
CKAP5-201ENST00000312055 VPS8Q8N3P4 1428 aa5.14□□□□□ -1.59
CKAP5-201ENST00000312055 CUX2O14529 1486 aa5.14□□□□□ -1.59
CKAP5-201ENST00000312055 DNMBPQ6XZF7 1577 aa5.13□□□□□ -1.59
CKAP5-201ENST00000312055 KANK1Q14678 1352 aa5.13□□□□□ -1.59
CKAP5-201ENST00000312055 ABCA10Q8WWZ4 1543 aa5.13□□□□□ -1.59
CKAP5-201ENST00000312055 MSH5O43196 834 aa5.13□□□□□ -1.59
CKAP5-201ENST00000312055 STK26Q9P289 416 aa5.13□□□□□ -1.59
CKAP5-201ENST00000312055 PIP4K2BP78356 416 aa5.13□□□□□ -1.59
CKAP5-201ENST00000312055 CLIP1P30622 1438 aa5.12□□□□□ -1.59
CKAP5-201ENST00000312055 ARID3AQ99856 593 aa5.12□□□□□ -1.59
CKAP5-201ENST00000312055 ABCA5Q8WWZ7 1642 aa5.12□□□□□ -1.59
CKAP5-201ENST00000312055 ARAP1Q96P48 1450 aa5.12□□□□□ -1.59
CKAP5-201ENST00000312055 JPH4Q96JJ6 628 aa5.11□□□□□ -1.59
CKAP5-201ENST00000312055 EFCAB2Q5VUJ9 269 aa5.11□□□□□ -1.59
CKAP5-201ENST00000312055 CDK11BP21127 795 aaKnown RBP5.11□□□□□ -1.59
CKAP5-201ENST00000312055 NUTM2DQ5VT03 806 aaPredicted RBP5.11□□□□□ -1.59
CKAP5-201ENST00000312055 CCNB3Q8WWL7 1395 aa5.11□□□□□ -1.59
CKAP5-201ENST00000312055 TONSLQ96HA7 1378 aa5.1□□□□□ -1.59
CKAP5-201ENST00000312055 NUTM2FA1L443 756 aa5.1□□□□□ -1.59
CKAP5-201ENST00000312055 IGF1RP08069 1367 aa5.1□□□□□ -1.59
CKAP5-201ENST00000312055 TARBP1Q13395 1621 aaKnown RBP5.1□□□□□ -1.59
CKAP5-201ENST00000312055 CUL7Q14999 1698 aa5.09□□□□□ -1.59
CKAP5-201ENST00000312055 ZNF330Q9Y3S2 320 aaPredicted RBP5.09□□□□□ -1.59
CKAP5-201ENST00000312055 SALL2Q9Y467 1007 aaPredicted RBP5.09□□□□□ -1.59
CKAP5-201ENST00000312055 CARMIL1Q5VZK9 1371 aa5.09□□□□□ -1.59
CKAP5-201ENST00000312055 KIF3BO15066 747 aa5.09□□□□□ -1.59
CKAP5-201ENST00000312055 TOPBP1Q92547 1522 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms