RNA–Protein interactions for RNA: ENST00000311172.11

FCHSD2-201, Transcript of FCH and double SH3 domains 2, humanhuman

TSL 1 (best) BASIC

Gene FCHSD2, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCHSD2-201ENST00000311172 FKBP8Q14318 412 aa9.13□□□□□ -0.95
FCHSD2-201ENST00000311172 KIF27Q86VH2 1401 aa9.08□□□□□ -0.96
FCHSD2-201ENST00000311172 CNGB1Q14028 1251 aaPredicted RBP9.08□□□□□ -0.96
FCHSD2-201ENST00000311172 RUSC2Q8N2Y8 1516 aa9.08□□□□□ -0.96
FCHSD2-201ENST00000311172 CARMIL1Q5VZK9 1371 aa9.07□□□□□ -0.96
FCHSD2-201ENST00000311172 SUPT16HQ9Y5B9 1047 aaKnown RBP9.06□□□□□ -0.96
FCHSD2-201ENST00000311172 FGD5Q6ZNL6 1462 aa9.05□□□□□ -0.96
FCHSD2-201ENST00000311172 JPH4Q96JJ6 628 aa9.04□□□□□ -0.96
FCHSD2-201ENST00000311172 CFTRP13569 1480 aa9.04□□□□□ -0.96
FCHSD2-201ENST00000311172 CHIC2Q9UKJ5 165 aa9.02□□□□□ -0.96
FCHSD2-201ENST00000311172 NBR1Q14596 966 aa9.01□□□□□ -0.97
FCHSD2-201ENST00000311172 RTL5Q5HYW3 569 aaPredicted RBP9.01□□□□□ -0.97
FCHSD2-201ENST00000311172 TSHZ2Q9NRE2 1034 aa9.01□□□□□ -0.97
FCHSD2-201ENST00000311172 TRIM52Q96A61 297 aa9.01□□□□□ -0.97
FCHSD2-201ENST00000311172 HMGXB3Q12766 1538 aa9□□□□□ -0.97
FCHSD2-201ENST00000311172 CDK11AQ9UQ88 783 aaPredicted RBP9□□□□□ -0.97
FCHSD2-201ENST00000311172 MRC2Q9UBG0 1479 aa9□□□□□ -0.97
FCHSD2-201ENST00000311172 IRX6P78412 446 aaPredicted RBP8.99□□□□□ -0.97
FCHSD2-201ENST00000311172 MLECQ14165 292 aa8.99□□□□□ -0.97
FCHSD2-201ENST00000311172 EIF5BO60841 1220 aaKnown RBP8.99□□□□□ -0.97
FCHSD2-201ENST00000311172 ZNF608Q9ULD9 1512 aaPredicted RBP8.99□□□□□ -0.97
FCHSD2-201ENST00000311172 ARID4BQ4LE39 1312 aaPredicted RBP8.98□□□□□ -0.97
FCHSD2-201ENST00000311172 PLEKHD1A6NEE1 506 aa8.96□□□□□ -0.97
FCHSD2-201ENST00000311172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.96□□□□□ -0.971e-6■■□□□ 13.6
FCHSD2-201ENST00000311172 TOPBP1Q92547 1522 aa8.96□□□□□ -0.98
FCHSD2-201ENST00000311172 GAPVD1Q14C86 1478 aa8.96□□□□□ -0.98
FCHSD2-201ENST00000311172 DDX10Q13206 875 aaKnown RBP8.95□□□□□ -0.98
FCHSD2-201ENST00000311172 POLA1P09884 1462 aaPredicted RBP8.94□□□□□ -0.98
FCHSD2-201ENST00000311172 RTN4Q9NQC3 1192 aaKnown RBP8.94□□□□□ -0.98
FCHSD2-201ENST00000311172 URB2Q14146 1524 aaKnown RBP8.93□□□□□ -0.98
FCHSD2-201ENST00000311172 CLIP1P30622 1438 aa8.93□□□□□ -0.98
FCHSD2-201ENST00000311172 HIRIP3Q9BW71 556 aaPredicted RBP8.92□□□□□ -0.98
FCHSD2-201ENST00000311172 RBM19Q9Y4C8 960 aaKnown RBP8.92□□□□□ -0.98
FCHSD2-201ENST00000311172 IGF1RP08069 1367 aa8.92□□□□□ -0.98
FCHSD2-201ENST00000311172 ESF1Q9H501 851 aaKnown RBP8.91□□□□□ -0.98
FCHSD2-201ENST00000311172 POLR3GLQ9BT43 218 aa8.91□□□□□ -0.98
FCHSD2-201ENST00000311172 CUX1P39880 1505 aa8.9□□□□□ -0.98
FCHSD2-201ENST00000311172 MTUS2Q5JR59 1369 aa8.9□□□□□ -0.98
FCHSD2-201ENST00000311172 FAM69CQ0P6D2 419 aa8.9□□□□□ -0.98
FCHSD2-201ENST00000311172 CLSPNQ9HAW4 1339 aa8.9□□□□□ -0.98
FCHSD2-201ENST00000311172 CHGAP10645 457 aaKnown RBP8.9□□□□□ -0.99
FCHSD2-201ENST00000311172 SNAPC4Q5SXM2 1469 aa8.89□□□□□ -0.99
FCHSD2-201ENST00000311172 RAPGEF2Q9Y4G8 1499 aa8.89□□□□□ -0.99
FCHSD2-201ENST00000311172 ANP32CO43423 234 aa8.89□□□□□ -0.99
FCHSD2-201ENST00000311172 FHOD3Q2V2M9 1422 aa8.88□□□□□ -0.99
FCHSD2-201ENST00000311172 ZNF326Q5BKZ1 582 aaKnown RBP8.88□□□□□ -0.99
FCHSD2-201ENST00000311172 SYNJ1O43426 1573 aa8.88□□□□□ -0.99
FCHSD2-201ENST00000311172 LAMC3Q9Y6N6 1575 aa8.88□□□□□ -0.99
FCHSD2-201ENST00000311172 NPM2Q86SE8 214 aaKnown RBP8.87□□□□□ -0.99
FCHSD2-201ENST00000311172 RRP7BPQ9NSQ0 103 aa8.87□□□□□ -0.99
FCHSD2-201ENST00000311172 CFDP1Q9UEE9 299 aaPredicted RBP8.85□□□□□ -0.99
FCHSD2-201ENST00000311172 GOLGA3Q08378 1498 aa8.85□□□□□ -0.99
FCHSD2-201ENST00000311172 CEP162Q5TB80 1403 aa8.85□□□□□ -0.99
FCHSD2-201ENST00000311172 PTPRGP23470 1445 aa8.85□□□□□ -0.99
FCHSD2-201ENST00000311172 IFT140Q96RY7 1462 aa8.85□□□□□ -0.99
FCHSD2-201ENST00000311172 HNRNPUQ00839 825 aaKnown RBP eCLIP8.85□□□□□ -0.99
FCHSD2-201ENST00000311172 DEKP35659 375 aaKnown RBP8.84□□□□□ -0.99
FCHSD2-201ENST00000311172 DAXXQ9UER7 740 aaPredicted RBP8.84□□□□□ -0.99
FCHSD2-201ENST00000311172 GRIN2BQ13224 1484 aa8.83□□□□□ -1
FCHSD2-201ENST00000311172 KANK4Q5T7N3 995 aaPredicted RBP8.83□□□□□ -1
FCHSD2-201ENST00000311172 CCDC136Q96JN2 1154 aa8.83□□□□□ -1
FCHSD2-201ENST00000311172 CARMIL2Q6F5E8 1435 aa8.83□□□□□ -1
FCHSD2-201ENST00000311172 PRKCSHP14314 528 aaPredicted RBP8.83□□□□□ -1
FCHSD2-201ENST00000311172 PRG4Q92954 1404 aaPredicted RBP8.82□□□□□ -1
FCHSD2-201ENST00000311172 PEG3Q9GZU2 1588 aa8.82□□□□□ -1
FCHSD2-201ENST00000311172 TSPY4P0CV99 314 aa8.81□□□□□ -1
FCHSD2-201ENST00000311172 TSPY10P0CW01 314 aa8.81□□□□□ -1
FCHSD2-201ENST00000311172 PLEKHG5O94827 1062 aa8.81□□□□□ -1
FCHSD2-201ENST00000311172 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.81□□□□□ -1
FCHSD2-201ENST00000311172 STAG3Q9UJ98 1225 aa8.81□□□□□ -1
FCHSD2-201ENST00000311172 SENP3-EIF4A1A0A087X0R7 540 aa8.8□□□□□ -1
FCHSD2-201ENST00000311172 KIF21AQ7Z4S6 1674 aa8.8□□□□□ -1
FCHSD2-201ENST00000311172 GGT6Q6P531 493 aa8.8□□□□□ -1
FCHSD2-201ENST00000311172 ANP32AP39687 249 aaKnown RBP8.79□□□□□ -1
FCHSD2-201ENST00000311172 DNMBPQ6XZF7 1577 aa8.78□□□□□ -1
FCHSD2-201ENST00000311172 HNRNPMP52272 730 aaKnown RBP eCLIP8.78□□□□□ -14e-7■■■■□ 26.3
FCHSD2-201ENST00000311172 SLC4A1APQ9BWU0 796 aaKnown RBP8.78□□□□□ -1
FCHSD2-201ENST00000311172 EEA1Q15075 1411 aa8.78□□□□□ -1
FCHSD2-201ENST00000311172 FHAD1B1AJZ9 1412 aa8.77□□□□□ -1.01
FCHSD2-201ENST00000311172 ANO8Q9HCE9 1232 aaPredicted RBP8.76□□□□□ -1.01
FCHSD2-201ENST00000311172 FAM9BQ8IZU0 186 aa8.76□□□□□ -1.01
FCHSD2-201ENST00000311172 ZBTB47Q9UFB7 747 aaPredicted RBP8.76□□□□□ -1.01
FCHSD2-201ENST00000311172 TNIKQ9UKE5 1360 aa8.75□□□□□ -1.01
FCHSD2-201ENST00000311172 B4GALNT3Q6L9W6 998 aa8.73□□□□□ -1.01
FCHSD2-201ENST00000311172 RAPGEF3O95398 923 aa8.73□□□□□ -1.01
FCHSD2-201ENST00000311172 ZNF644Q9H582 1327 aaPredicted RBP8.72□□□□□ -1.01
FCHSD2-201ENST00000311172 RGL3Q3MIN7 710 aa8.71□□□□□ -1.01
FCHSD2-201ENST00000311172 DNAJC5Q9H3Z4 198 aa8.71□□□□□ -1.01
FCHSD2-201ENST00000311172 CCNB3Q8WWL7 1395 aa8.71□□□□□ -1.02
FCHSD2-201ENST00000311172 KDM2AQ9Y2K7 1162 aa8.71□□□□□ -1.02
FCHSD2-201ENST00000311172 AFAP1Q8N556 730 aa8.7□□□□□ -1.02
FCHSD2-201ENST00000311172 LAS1LQ9Y4W2 734 aaKnown RBP8.7□□□□□ -1.02
FCHSD2-201ENST00000311172 ARXQ96QS3 562 aa8.69□□□□□ -1.02
FCHSD2-201ENST00000311172 TOP2BQ02880 1626 aa8.69□□□□□ -1.02
FCHSD2-201ENST00000311172 EFCAB2Q5VUJ9 269 aa8.69□□□□□ -1.02
FCHSD2-201ENST00000311172 ABCA10Q8WWZ4 1543 aa8.69□□□□□ -1.02
FCHSD2-201ENST00000311172 NUTM2DQ5VT03 806 aaPredicted RBP8.68□□□□□ -1.02
FCHSD2-201ENST00000311172 SYNJ2O15056 1496 aa8.68□□□□□ -1.02
FCHSD2-201ENST00000311172 NPM3O75607 178 aaKnown RBP8.68□□□□□ -1.02
FCHSD2-201ENST00000311172 NOP58Q9Y2X3 529 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms