RNA–Protein interactions for RNA: ENST00000309993.2

MSL2-201, Transcript of MSL complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL2, Length 4,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2-201ENST00000309993 HIRIP3Q9BW71 556 aaPredicted RBP19.42■□□□□ 0.7
MSL2-201ENST00000309993 TSPY4P0CV99 314 aa19.41■□□□□ 0.7
MSL2-201ENST00000309993 TSPY10P0CW01 314 aa19.41■□□□□ 0.7
MSL2-201ENST00000309993 SETD5Q9C0A6 1442 aa19.41■□□□□ 0.7
MSL2-201ENST00000309993 TMC1Q8TDI8 760 aa19.39■□□□□ 0.7
MSL2-201ENST00000309993 ATAD2BQ9ULI0 1458 aa19.37■□□□□ 0.69
MSL2-201ENST00000309993 KANK4Q5T7N3 995 aaPredicted RBP19.36■□□□□ 0.69
MSL2-201ENST00000309993 SIN3AQ96ST3 1273 aa19.36■□□□□ 0.69
MSL2-201ENST00000309993 RAPGEF2Q9Y4G8 1499 aa19.34■□□□□ 0.69
MSL2-201ENST00000309993 ARHGAP35Q9NRY4 1499 aa19.33■□□□□ 0.68
MSL2-201ENST00000309993 CANXP27824 592 aaKnown RBP19.33■□□□□ 0.68
MSL2-201ENST00000309993 CCDC136Q96JN2 1154 aa19.33■□□□□ 0.68
MSL2-201ENST00000309993 CHMP7Q8WUX9 453 aaPredicted RBP19.31■□□□□ 0.68
MSL2-201ENST00000309993 CCER2I3L3R5 266 aa19.31■□□□□ 0.68
MSL2-201ENST00000309993 RUSC2Q8N2Y8 1516 aa19.31■□□□□ 0.68
MSL2-201ENST00000309993 SUPT16HQ9Y5B9 1047 aaKnown RBP19.3■□□□□ 0.68
MSL2-201ENST00000309993 RAB3GAP2Q9H2M9 1393 aa19.28■□□□□ 0.68
MSL2-201ENST00000309993 FMN1Q68DA7 1419 aa19.24■□□□□ 0.67
MSL2-201ENST00000309993 PLEKHD1A6NEE1 506 aa19.23■□□□□ 0.67
MSL2-201ENST00000309993 CFDP1Q9UEE9 299 aaPredicted RBP19.22■□□□□ 0.67
MSL2-201ENST00000309993 KDM2AQ9Y2K7 1162 aa19.21■□□□□ 0.67
MSL2-201ENST00000309993 NPM2Q86SE8 214 aaKnown RBP19.2■□□□□ 0.66
MSL2-201ENST00000309993 NEFMP07197 916 aa19.2■□□□□ 0.66
MSL2-201ENST00000309993 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.2■□□□□ 0.66
MSL2-201ENST00000309993 DHX57Q6P158 1386 aaKnown RBP19.19■□□□□ 0.66
MSL2-201ENST00000309993 IRX6P78412 446 aaPredicted RBP19.19■□□□□ 0.66
MSL2-201ENST00000309993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.17■□□□□ 0.66
MSL2-201ENST00000309993 ZBTB47Q9UFB7 747 aaPredicted RBP19.16■□□□□ 0.66
MSL2-201ENST00000309993 CADPSQ9ULU8 1353 aa19.16■□□□□ 0.66
MSL2-201ENST00000309993 ANP32EQ9BTT0 268 aa19.15■□□□□ 0.66
MSL2-201ENST00000309993 WDR43Q15061 677 aaKnown RBP eCLIP19.15■□□□□ 0.66
MSL2-201ENST00000309993 PPP4R2Q9NY27 417 aa19.13■□□□□ 0.65
MSL2-201ENST00000309993 KIF21BO75037 1637 aa19.12■□□□□ 0.65
MSL2-201ENST00000309993 SALL2Q9Y467 1007 aaPredicted RBP19.12■□□□□ 0.65
MSL2-201ENST00000309993 PPP1R15AO75807 674 aaPredicted RBP19.11■□□□□ 0.65
MSL2-201ENST00000309993 EIF4G1Q04637 1599 aaKnown RBP19.1■□□□□ 0.65
MSL2-201ENST00000309993 CARD11Q9BXL7 1154 aa19.08■□□□□ 0.64
MSL2-201ENST00000309993 PDS5BQ9NTI5 1447 aa19.06■□□□□ 0.64
MSL2-201ENST00000309993 UPF2Q9HAU5 1272 aaKnown RBP19.05■□□□□ 0.64
MSL2-201ENST00000309993 ERICH6BQ5W0A0 696 aa19.05■□□□□ 0.64
MSL2-201ENST00000309993 CDCA8Q53HL2 280 aa19.03■□□□□ 0.64
MSL2-201ENST00000309993 CHGAP10645 457 aaKnown RBP19.03■□□□□ 0.64
MSL2-201ENST00000309993 HSPA5P11021 654 aaKnown RBP19.03■□□□□ 0.64
MSL2-201ENST00000309993 FHOD3Q2V2M9 1422 aa19.02■□□□□ 0.64
MSL2-201ENST00000309993 NPM1P06748 294 aaKnown RBP eCLIP19.01■□□□□ 0.63
MSL2-201ENST00000309993 ERICH3Q5RHP9 1530 aa19.01■□□□□ 0.63
MSL2-201ENST00000309993 TDRD9Q8NDG6 1382 aaKnown RBP18.96■□□□□ 0.63
MSL2-201ENST00000309993 NBR1Q14596 966 aa18.95■□□□□ 0.62
MSL2-201ENST00000309993 MPHOSPH9Q99550 1183 aa18.95■□□□□ 0.62
MSL2-201ENST00000309993 RGL3Q3MIN7 710 aa18.95■□□□□ 0.62
MSL2-201ENST00000309993 DDRGK1Q96HY6 314 aa18.95■□□□□ 0.62
MSL2-201ENST00000309993 NCAPD3P42695 1498 aa18.94■□□□□ 0.62
MSL2-201ENST00000309993 SYNJ1O43426 1573 aa18.93■□□□□ 0.62
MSL2-201ENST00000309993 IGF1RP08069 1367 aa18.93■□□□□ 0.62
MSL2-201ENST00000309993 KNSTRNQ9Y448 316 aa18.92■□□□□ 0.62
MSL2-201ENST00000309993 FANCD2Q9BXW9 1451 aa18.9■□□□□ 0.62
MSL2-201ENST00000309993 CARMIL2Q6F5E8 1435 aa18.88■□□□□ 0.61
MSL2-201ENST00000309993 ERCC6Q03468 1493 aa18.88■□□□□ 0.61
MSL2-201ENST00000309993 KCNH8Q96L42 1107 aa18.88■□□□□ 0.61
MSL2-201ENST00000309993 CCDC18Q5T9S5 1454 aa18.88■□□□□ 0.61
MSL2-201ENST00000309993 RBM19Q9Y4C8 960 aaKnown RBP18.87■□□□□ 0.61
MSL2-201ENST00000309993 SLC24A1O60721 1099 aa18.87■□□□□ 0.61
MSL2-201ENST00000309993 RRBP1Q9P2E9 1410 aaKnown RBP18.86■□□□□ 0.61
MSL2-201ENST00000309993 FGD5Q6ZNL6 1462 aa18.86■□□□□ 0.61
MSL2-201ENST00000309993 STAG3Q9UJ98 1225 aa18.85■□□□□ 0.61
MSL2-201ENST00000309993 ANKRD30AQ9BXX3 1397 aa18.85■□□□□ 0.61
MSL2-201ENST00000309993 PKD2Q13563 968 aa18.85■□□□□ 0.61
MSL2-201ENST00000309993 TSHZ2Q9NRE2 1034 aa18.85■□□□□ 0.61
MSL2-201ENST00000309993 DCAF11Q8TEB1 546 aa18.84■□□□□ 0.61
MSL2-201ENST00000309993 B4GALNT3Q6L9W6 998 aa18.83■□□□□ 0.61
MSL2-201ENST00000309993 TOP2BQ02880 1626 aa18.83■□□□□ 0.61
MSL2-201ENST00000309993 PRXQ9BXM0 1461 aa18.83■□□□□ 0.6
MSL2-201ENST00000309993 L3MBTL2Q969R5 705 aa18.82■□□□□ 0.6
MSL2-201ENST00000309993 TMF1P82094 1093 aa18.82■□□□□ 0.6
MSL2-201ENST00000309993 LRRC9Q6ZRR7 1453 aa18.82■□□□□ 0.6
MSL2-201ENST00000309993 NOP58Q9Y2X3 529 aaKnown RBP18.8■□□□□ 0.6
MSL2-201ENST00000309993 PPM1GO15355 546 aaPredicted RBP18.8■□□□□ 0.6
MSL2-201ENST00000309993 ESF1Q9H501 851 aaKnown RBP18.8■□□□□ 0.6
MSL2-201ENST00000309993 ARAP1Q96P48 1450 aa18.8■□□□□ 0.6
MSL2-201ENST00000309993 HSP90AA1P07900 732 aaKnown RBP18.79■□□□□ 0.6
MSL2-201ENST00000309993 FOXD1Q16676 465 aa18.79■□□□□ 0.6
MSL2-201ENST00000309993 CFAP53Q96M91 514 aa18.79■□□□□ 0.6
MSL2-201ENST00000309993 RALBP1Q15311 655 aa18.78■□□□□ 0.6
MSL2-201ENST00000309993 CUX1P39880 1505 aa18.78■□□□□ 0.6
MSL2-201ENST00000309993 BECN1Q14457 450 aa18.77■□□□□ 0.6
MSL2-201ENST00000309993 CFTRP13569 1480 aa18.77■□□□□ 0.6
MSL2-201ENST00000309993 ROCK2O75116 1388 aaKnown RBP18.77■□□□□ 0.6
MSL2-201ENST00000309993 FGD6Q6ZV73 1430 aa18.77■□□□□ 0.59
MSL2-201ENST00000309993 KTN1Q86UP2 1357 aaKnown RBP18.75■□□□□ 0.59
MSL2-201ENST00000309993 ANP32BQ92688 251 aaKnown RBP18.75■□□□□ 0.59
MSL2-201ENST00000309993 NUP155O75694 1391 aa18.75■□□□□ 0.59
MSL2-201ENST00000309993 PHLDB1Q86UU1 1377 aa18.75■□□□□ 0.59
MSL2-201ENST00000309993 CASKIN1Q8WXD9 1431 aa18.74■□□□□ 0.59
MSL2-201ENST00000309993 UACAQ9BZF9 1416 aa18.73■□□□□ 0.59
MSL2-201ENST00000309993 BCL11AQ9H165 835 aa18.73■□□□□ 0.59
MSL2-201ENST00000309993 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
MSL2-201ENST00000309993 MYOM3Q5VTT5 1437 aa18.72■□□□□ 0.59
MSL2-201ENST00000309993 CC2D1BQ5T0F9 858 aaKnown RBP18.71■□□□□ 0.59
MSL2-201ENST00000309993 SENP3-EIF4A1A0A087X0R7 540 aa18.71■□□□□ 0.59
MSL2-201ENST00000309993 RSPH4AQ5TD94 716 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms