RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 ERICH3Q5RHP9 1530 aa21.72■■□□□ 1.07
TPT1-201ENST00000309246 SHROOM2Q13796 1616 aa21.71■■□□□ 1.07
TPT1-201ENST00000309246 RUSC2Q8N2Y8 1516 aa21.55■■□□□ 1.04
TPT1-201ENST00000309246 PRG4Q92954 1404 aaPredicted RBP21.54■■□□□ 1.04
TPT1-201ENST00000309246 KIF13AQ9H1H9 1805 aa21.48■■□□□ 1.03
TPT1-201ENST00000309246 JPH4Q96JJ6 628 aa21.47■■□□□ 1.03
TPT1-201ENST00000309246 CUL7Q14999 1698 aa21.45■■□□□ 1.02
TPT1-201ENST00000309246 KIF27Q86VH2 1401 aa21.41■■□□□ 1.02
TPT1-201ENST00000309246 IGF1RP08069 1367 aa21.38■■□□□ 1.01
TPT1-201ENST00000309246 KIAA0586Q9BVV6 1533 aa21.36■■□□□ 1.01
TPT1-201ENST00000309246 ADCY10Q96PN6 1610 aa21.36■■□□□ 1.01
TPT1-201ENST00000309246 MAPKBP1O60336 1514 aa21.29■■□□□ 1
TPT1-201ENST00000309246 DIP2BQ9P265 1576 aa21.27■■□□□ 1
TPT1-201ENST00000309246 ABCC10Q5T3U5 1492 aa21.27■■□□□ 1
TPT1-201ENST00000309246 CARMIL1Q5VZK9 1371 aa21.26■□□□□ 0.99
TPT1-201ENST00000309246 NPM1P06748 294 aaKnown RBP eCLIP21.26■□□□□ 0.99
TPT1-201ENST00000309246 FAM69CQ0P6D2 419 aa21.23■□□□□ 0.99
TPT1-201ENST00000309246 IQGAP2Q13576 1575 aa21.21■□□□□ 0.99
TPT1-201ENST00000309246 TSPOAP1O95153 1857 aa21.21■□□□□ 0.99
TPT1-201ENST00000309246 TTBK1Q5TCY1 1321 aaPredicted RBP21.17■□□□□ 0.98
TPT1-201ENST00000309246 PTPRGP23470 1445 aa21.17■□□□□ 0.98
TPT1-201ENST00000309246 CARMIL2Q6F5E8 1435 aa21.14■□□□□ 0.98
TPT1-201ENST00000309246 TNIKQ9UKE5 1360 aa21.13■□□□□ 0.97
TPT1-201ENST00000309246 KDM6BO15054 1643 aa21.11■□□□□ 0.97
TPT1-201ENST00000309246 ABCC2Q92887 1545 aa21.09■□□□□ 0.97
TPT1-201ENST00000309246 DISP1Q96F81 1524 aa21.09■□□□□ 0.97
TPT1-201ENST00000309246 RAPGEF2Q9Y4G8 1499 aa21.08■□□□□ 0.97
TPT1-201ENST00000309246 UGGT2Q9NYU1 1516 aa21.04■□□□□ 0.96
TPT1-201ENST00000309246 CTTNBP2Q8WZ74 1663 aa21.03■□□□□ 0.96
TPT1-201ENST00000309246 UHRF1BP1LA0JNW5 1464 aa21.03■□□□□ 0.96
TPT1-201ENST00000309246 KIAA0556O60303 1618 aa21.03■□□□□ 0.96
TPT1-201ENST00000309246 ASXL2Q76L83 1435 aa21.03■□□□□ 0.96
TPT1-201ENST00000309246 UACAQ9BZF9 1416 aa21.02■□□□□ 0.96
TPT1-201ENST00000309246 PPRC1Q5VV67 1664 aaKnown RBP21.02■□□□□ 0.95
TPT1-201ENST00000309246 PLB1Q6P1J6 1458 aa21■□□□□ 0.95
TPT1-201ENST00000309246 GLI2P10070 1586 aa20.99■□□□□ 0.95
TPT1-201ENST00000309246 ZCCHC11Q5TAX3 1644 aaKnown RBP20.98■□□□□ 0.95
TPT1-201ENST00000309246 KDM5BQ9UGL1 1544 aa20.95■□□□□ 0.94
TPT1-201ENST00000309246 ADRA2BP18089 450 aa20.91■□□□□ 0.94
TPT1-201ENST00000309246 MAP3K4Q9Y6R4 1608 aa20.91■□□□□ 0.94
TPT1-201ENST00000309246 EPRSP07814 1512 aaKnown RBP20.9■□□□□ 0.94
TPT1-201ENST00000309246 PPP6R1Q9UPN7 881 aa20.9■□□□□ 0.94
TPT1-201ENST00000309246 KDM4FA0A1W2PPD8 638 aa20.85■□□□□ 0.93
TPT1-201ENST00000309246 GOLGA3Q08378 1498 aa20.84■□□□□ 0.93
TPT1-201ENST00000309246 PRXQ9BXM0 1461 aa20.84■□□□□ 0.93
TPT1-201ENST00000309246 ABCA8O94911 1581 aa20.82■□□□□ 0.92
TPT1-201ENST00000309246 WDR7Q9Y4E6 1490 aa20.81■□□□□ 0.92
TPT1-201ENST00000309246 TEX14Q8IWB6 1497 aa20.8■□□□□ 0.92
TPT1-201ENST00000309246 COL17A1Q9UMD9 1497 aaPredicted RBP20.8■□□□□ 0.92
TPT1-201ENST00000309246 CFAP43Q8NDM7 1665 aa20.76■□□□□ 0.91
TPT1-201ENST00000309246 ADGRL1O94910 1474 aa20.72■□□□□ 0.91
TPT1-201ENST00000309246 KCNH8Q96L42 1107 aa20.68■□□□□ 0.9
TPT1-201ENST00000309246 CD109Q6YHK3 1445 aa20.68■□□□□ 0.9
TPT1-201ENST00000309246 MAGI3Q5TCQ9 1506 aa20.67■□□□□ 0.9
TPT1-201ENST00000309246 P3H3Q8IVL6 736 aa20.66■□□□□ 0.9
TPT1-201ENST00000309246 PIAS4Q8N2W9 510 aaPredicted RBP20.66■□□□□ 0.9
TPT1-201ENST00000309246 SAMD9Q5K651 1589 aa20.66■□□□□ 0.9
TPT1-201ENST00000309246 ARID3CA6NKF2 412 aa20.64■□□□□ 0.89
TPT1-201ENST00000309246 CSRNP3Q8WYN3 585 aa20.63■□□□□ 0.89
TPT1-201ENST00000309246 ATP10BO94823 1461 aa20.61■□□□□ 0.89
TPT1-201ENST00000309246 RAPGEF6Q8TEU7 1601 aa20.6■□□□□ 0.89
TPT1-201ENST00000309246 FAM9AQ8IZU1 332 aaPredicted RBP20.58■□□□□ 0.89
TPT1-201ENST00000309246 ABCA9Q8IUA7 1624 aa20.56■□□□□ 0.88
TPT1-201ENST00000309246 KIF21BO75037 1637 aa20.56■□□□□ 0.88
TPT1-201ENST00000309246 EEA1Q15075 1411 aa20.54■□□□□ 0.88
TPT1-201ENST00000309246 RANGAP1P46060 587 aaPredicted RBP20.51■□□□□ 0.87
TPT1-201ENST00000309246 ARAP3Q8WWN8 1544 aa20.51■□□□□ 0.87
TPT1-201ENST00000309246 FHOD3Q2V2M9 1422 aa20.5■□□□□ 0.87
TPT1-201ENST00000309246 NUP153P49790 1475 aaKnown RBP20.49■□□□□ 0.87
TPT1-201ENST00000309246 HECW2Q9P2P5 1572 aa20.48■□□□□ 0.87
TPT1-201ENST00000309246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.47■□□□□ 0.87
TPT1-201ENST00000309246 HNRNPUL2Q1KMD3 747 aaKnown RBP20.47■□□□□ 0.87
TPT1-201ENST00000309246 NEO1Q92859 1461 aa20.42■□□□□ 0.86
TPT1-201ENST00000309246 EFCAB5A4FU69 1503 aa20.42■□□□□ 0.86
TPT1-201ENST00000309246 PHLDB1Q86UU1 1377 aa20.41■□□□□ 0.86
TPT1-201ENST00000309246 FRMPD1Q5SYB0 1578 aa20.41■□□□□ 0.86
TPT1-201ENST00000309246 RAPGEF3O95398 923 aa20.37■□□□□ 0.85
TPT1-201ENST00000309246 ADAMTSL3P82987 1691 aa20.35■□□□□ 0.85
TPT1-201ENST00000309246 TTC37Q6PGP7 1564 aa20.34■□□□□ 0.85
TPT1-201ENST00000309246 RICTORQ6R327 1708 aa20.34■□□□□ 0.85
TPT1-201ENST00000309246 MSH5O43196 834 aa20.34■□□□□ 0.85
TPT1-201ENST00000309246 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.33■□□□□ 0.85
TPT1-201ENST00000309246 PLEKHD1A6NEE1 506 aa20.33■□□□□ 0.85
TPT1-201ENST00000309246 CFAP74Q9C0B2 1584 aa20.33■□□□□ 0.84
TPT1-201ENST00000309246 CDK13Q14004 1512 aaKnown RBP20.32■□□□□ 0.84
TPT1-201ENST00000309246 BCORL1Q5H9F3 1711 aa20.32■□□□□ 0.84
TPT1-201ENST00000309246 EHMT2Q96KQ7 1210 aa20.31■□□□□ 0.84
TPT1-201ENST00000309246 ARHGEF40Q8TER5 1519 aa20.29■□□□□ 0.84
TPT1-201ENST00000309246 FANCAO15360 1455 aa20.29■□□□□ 0.84
TPT1-201ENST00000309246 ILDR1Q86SU0 546 aaPredicted RBP20.28■□□□□ 0.84
TPT1-201ENST00000309246 AKNAQ7Z591 1439 aa20.27■□□□□ 0.84
TPT1-201ENST00000309246 MADDQ8WXG6 1647 aa20.27■□□□□ 0.84
TPT1-201ENST00000309246 DENND4BO75064 1496 aaPredicted RBP20.27■□□□□ 0.84
TPT1-201ENST00000309246 PTPRMP28827 1452 aa20.27■□□□□ 0.84
TPT1-201ENST00000309246 HECW1Q76N89 1606 aa20.26■□□□□ 0.83
TPT1-201ENST00000309246 UBTFP17480 764 aaKnown RBP20.24■□□□□ 0.83
TPT1-201ENST00000309246 ARID4BQ4LE39 1312 aaPredicted RBP20.24■□□□□ 0.83
TPT1-201ENST00000309246 ARHGAP35Q9NRY4 1499 aa20.23■□□□□ 0.83
TPT1-201ENST00000309246 RIMS1Q86UR5 1692 aaKnown RBP20.22■□□□□ 0.83
TPT1-201ENST00000309246 ZMYM4Q5VZL5 1548 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms