RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 JPH4Q96JJ6 628 aa29.18■■■□□ 2.26
HMGCLL1-202ENST00000308161 PRG4Q92954 1404 aaPredicted RBP29.17■■■□□ 2.26
HMGCLL1-202ENST00000308161 CARMIL1Q5VZK9 1371 aa29.15■■■□□ 2.26
HMGCLL1-202ENST00000308161 KIAA0586Q9BVV6 1533 aa29.06■■■□□ 2.24
HMGCLL1-202ENST00000308161 RAPGEF2Q9Y4G8 1499 aa28.91■■■□□ 2.22
HMGCLL1-202ENST00000308161 TTBK1Q5TCY1 1321 aaPredicted RBP28.88■■■□□ 2.21
HMGCLL1-202ENST00000308161 IQGAP2Q13576 1575 aa28.87■■■□□ 2.21
HMGCLL1-202ENST00000308161 CARMIL2Q6F5E8 1435 aa28.8■■■□□ 2.2
HMGCLL1-202ENST00000308161 NPM1P06748 294 aaKnown RBP eCLIP28.78■■■□□ 2.2
HMGCLL1-202ENST00000308161 PTPRGP23470 1445 aa28.77■■■□□ 2.2
HMGCLL1-202ENST00000308161 ADCY10Q96PN6 1610 aa28.75■■■□□ 2.19
HMGCLL1-202ENST00000308161 TNIKQ9UKE5 1360 aa28.73■■■□□ 2.19
HMGCLL1-202ENST00000308161 PRXQ9BXM0 1461 aa28.69■■■□□ 2.18
HMGCLL1-202ENST00000308161 DISP1Q96F81 1524 aa28.68■■■□□ 2.18
HMGCLL1-202ENST00000308161 UGGT2Q9NYU1 1516 aa28.66■■■□□ 2.18
HMGCLL1-202ENST00000308161 CTTNBP2Q8WZ74 1663 aa28.66■■■□□ 2.18
HMGCLL1-202ENST00000308161 CSRNP3Q8WYN3 585 aa28.62■■■□□ 2.17
HMGCLL1-202ENST00000308161 MAPKBP1O60336 1514 aa28.61■■■□□ 2.17
HMGCLL1-202ENST00000308161 KIF13AQ9H1H9 1805 aa28.6■■■□□ 2.17
HMGCLL1-202ENST00000308161 KIAA0556O60303 1618 aa28.6■■■□□ 2.17
HMGCLL1-202ENST00000308161 FAM69CQ0P6D2 419 aa28.59■■■□□ 2.17
HMGCLL1-202ENST00000308161 FAM9AQ8IZU1 332 aaPredicted RBP28.59■■■□□ 2.17
HMGCLL1-202ENST00000308161 ABCC10Q5T3U5 1492 aa28.56■■■□□ 2.16
HMGCLL1-202ENST00000308161 UACAQ9BZF9 1416 aa28.54■■■□□ 2.16
HMGCLL1-202ENST00000308161 ABCC2Q92887 1545 aa28.53■■■□□ 2.16
HMGCLL1-202ENST00000308161 EEA1Q15075 1411 aa28.52■■■□□ 2.16
HMGCLL1-202ENST00000308161 DIP2BQ9P265 1576 aa28.51■■■□□ 2.15
HMGCLL1-202ENST00000308161 GOLGA3Q08378 1498 aa28.5■■■□□ 2.15
HMGCLL1-202ENST00000308161 UHRF1BP1LA0JNW5 1464 aa28.48■■■□□ 2.15
HMGCLL1-202ENST00000308161 CHIC1Q5VXU3 224 aa28.45■■■□□ 2.15
HMGCLL1-202ENST00000308161 ASXL2Q76L83 1435 aa28.42■■■□□ 2.14
HMGCLL1-202ENST00000308161 P3H3Q8IVL6 736 aa28.41■■■□□ 2.14
HMGCLL1-202ENST00000308161 PLB1Q6P1J6 1458 aa28.4■■■□□ 2.14
HMGCLL1-202ENST00000308161 RANGAP1P46060 587 aaPredicted RBP28.38■■■□□ 2.13
HMGCLL1-202ENST00000308161 KDM5BQ9UGL1 1544 aa28.37■■■□□ 2.13
HMGCLL1-202ENST00000308161 TSPOAP1O95153 1857 aa28.35■■■□□ 2.13
HMGCLL1-202ENST00000308161 ZCCHC11Q5TAX3 1644 aaKnown RBP28.35■■■□□ 2.13
HMGCLL1-202ENST00000308161 EHMT2Q96KQ7 1210 aa28.33■■■□□ 2.13
HMGCLL1-202ENST00000308161 ABCA8O94911 1581 aa28.29■■■□□ 2.12
HMGCLL1-202ENST00000308161 KIF21BO75037 1637 aa28.28■■■□□ 2.12
HMGCLL1-202ENST00000308161 ARID3CA6NKF2 412 aa28.25■■■□□ 2.11
HMGCLL1-202ENST00000308161 SAMD9Q5K651 1589 aa28.25■■■□□ 2.11
HMGCLL1-202ENST00000308161 EPRSP07814 1512 aaKnown RBP28.23■■■□□ 2.11
HMGCLL1-202ENST00000308161 GLI2P10070 1586 aa28.22■■■□□ 2.11
HMGCLL1-202ENST00000308161 WDR7Q9Y4E6 1490 aa28.2■■■□□ 2.1
HMGCLL1-202ENST00000308161 KDM6BO15054 1643 aa28.19■■■□□ 2.1
HMGCLL1-202ENST00000308161 UBTFP17480 764 aaKnown RBP28.18■■■□□ 2.1
HMGCLL1-202ENST00000308161 KCNH8Q96L42 1107 aa28.16■■■□□ 2.1
HMGCLL1-202ENST00000308161 FHOD3Q2V2M9 1422 aa28.15■■■□□ 2.1
HMGCLL1-202ENST00000308161 PPRC1Q5VV67 1664 aaKnown RBP28.13■■■□□ 2.09
HMGCLL1-202ENST00000308161 MAP3K4Q9Y6R4 1608 aa28.11■■■□□ 2.09
HMGCLL1-202ENST00000308161 RAPGEF6Q8TEU7 1601 aa28.09■■■□□ 2.09
HMGCLL1-202ENST00000308161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.08■■■□□ 2.09
HMGCLL1-202ENST00000308161 HNRNPUL2Q1KMD3 747 aaKnown RBP28.08■■■□□ 2.09
HMGCLL1-202ENST00000308161 ATP10BO94823 1461 aa28.07■■■□□ 2.08
HMGCLL1-202ENST00000308161 AEBP2Q6ZN18 517 aaPredicted RBP28.07■■■□□ 2.08
HMGCLL1-202ENST00000308161 EFCAB5A4FU69 1503 aa28.05■■■□□ 2.08
HMGCLL1-202ENST00000308161 TEX14Q8IWB6 1497 aa28.03■■■□□ 2.08
HMGCLL1-202ENST00000308161 CD109Q6YHK3 1445 aa28■■■□□ 2.07
HMGCLL1-202ENST00000308161 NUP153P49790 1475 aaKnown RBP27.99■■■□□ 2.07
HMGCLL1-202ENST00000308161 CFAP43Q8NDM7 1665 aa27.97■■■□□ 2.07
HMGCLL1-202ENST00000308161 COL17A1Q9UMD9 1497 aaPredicted RBP27.93■■■□□ 2.06
HMGCLL1-202ENST00000308161 MAGI3Q5TCQ9 1506 aa27.9■■■□□ 2.06
HMGCLL1-202ENST00000308161 ARHGAP35Q9NRY4 1499 aa27.89■■■□□ 2.06
HMGCLL1-202ENST00000308161 ATP1B4Q9UN42 357 aaPredicted RBP27.89■■■□□ 2.05
HMGCLL1-202ENST00000308161 PLEKHD1A6NEE1 506 aa27.84■■■□□ 2.05
HMGCLL1-202ENST00000308161 ABCA9Q8IUA7 1624 aa27.82■■■□□ 2.04
HMGCLL1-202ENST00000308161 FMN1Q68DA7 1419 aa27.82■■■□□ 2.04
HMGCLL1-202ENST00000308161 CDK13Q14004 1512 aaKnown RBP27.8■■■□□ 2.04
HMGCLL1-202ENST00000308161 HECW1Q76N89 1606 aa27.75■■■□□ 2.03
HMGCLL1-202ENST00000308161 KDM4FA0A1W2PPD8 638 aa27.72■■■□□ 2.03
HMGCLL1-202ENST00000308161 ARAP3Q8WWN8 1544 aa27.67■■■□□ 2.02
HMGCLL1-202ENST00000308161 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.66■■■□□ 2.02
HMGCLL1-202ENST00000308161 NEO1Q92859 1461 aa27.64■■■□□ 2.02
HMGCLL1-202ENST00000308161 TTC37Q6PGP7 1564 aa27.64■■■□□ 2.01
HMGCLL1-202ENST00000308161 PHLDB1Q86UU1 1377 aa27.63■■■□□ 2.01
HMGCLL1-202ENST00000308161 CDK11AQ9UQ88 783 aaPredicted RBP27.63■■■□□ 2.01
HMGCLL1-202ENST00000308161 ADGRL1O94910 1474 aa27.62■■■□□ 2.01
HMGCLL1-202ENST00000308161 CLIP1P30622 1438 aa27.62■■■□□ 2.01
HMGCLL1-202ENST00000308161 RAPGEF3O95398 923 aa27.62■■■□□ 2.01
HMGCLL1-202ENST00000308161 PCF11O94913 1555 aaKnown RBP27.6■■■□□ 2.01
HMGCLL1-202ENST00000308161 FANCAO15360 1455 aa27.57■■■□□ 2
HMGCLL1-202ENST00000308161 LRRIQ1Q96JM4 1722 aa27.56■■■□□ 2
HMGCLL1-202ENST00000308161 CASKIN1Q8WXD9 1431 aa27.56■■■□□ 2
HMGCLL1-202ENST00000308161 AKNAQ7Z591 1439 aa27.53■■■□□ 2
HMGCLL1-202ENST00000308161 TROQ12816 1431 aaPredicted RBP27.53■■■□□ 2
HMGCLL1-202ENST00000308161 CFAP74Q9C0B2 1584 aa27.52■■■□□ 2
HMGCLL1-202ENST00000308161 KIF14Q15058 1648 aa27.52■■■□□ 2
HMGCLL1-202ENST00000308161 FRMPD1Q5SYB0 1578 aa27.5■■□□□ 1.99
HMGCLL1-202ENST00000308161 DENND4BO75064 1496 aaPredicted RBP27.49■■□□□ 1.99
HMGCLL1-202ENST00000308161 CCDC18Q5T9S5 1454 aa27.49■■□□□ 1.99
HMGCLL1-202ENST00000308161 FYCO1Q9BQS8 1478 aa27.47■■□□□ 1.99
HMGCLL1-202ENST00000308161 PLCH2O75038 1416 aa27.47■■□□□ 1.99
HMGCLL1-202ENST00000308161 MYO5CQ9NQX4 1742 aa27.45■■□□□ 1.98
HMGCLL1-202ENST00000308161 EFCAB2Q5VUJ9 269 aa27.41■■□□□ 1.98
HMGCLL1-202ENST00000308161 RICTORQ6R327 1708 aa27.41■■□□□ 1.98
HMGCLL1-202ENST00000308161 CEP162Q5TB80 1403 aa27.4■■□□□ 1.98
HMGCLL1-202ENST00000308161 SCAPERQ9BY12 1400 aa27.4■■□□□ 1.98
HMGCLL1-202ENST00000308161 ARHGAP5Q13017 1502 aa27.39■■□□□ 1.98
HMGCLL1-202ENST00000308161 ARID4BQ4LE39 1312 aaPredicted RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms