RNA–Protein interactions for RNA: ENST00000307808.10

AFF1-201, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AFF1, Length 9,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-201ENST00000307808 USP35Q9P2H5 1018 aa17.03■□□□□ 0.32
AFF1-201ENST00000307808 DDX10Q13206 875 aaKnown RBP17.02■□□□□ 0.32
AFF1-201ENST00000307808 CFAP44Q96MT7 982 aa17.02■□□□□ 0.32
AFF1-201ENST00000307808 KIAA2012Q0VF49 1180 aa17.01■□□□□ 0.31
AFF1-201ENST00000307808 CHGAP10645 457 aaKnown RBP17.01■□□□□ 0.31
AFF1-201ENST00000307808 PTMSP20962 102 aa17.01■□□□□ 0.31
AFF1-201ENST00000307808 SALL2Q9Y467 1007 aaPredicted RBP17.01■□□□□ 0.31
AFF1-201ENST00000307808 CDCA8Q53HL2 280 aa16.98■□□□□ 0.31
AFF1-201ENST00000307808 CFAP53Q96M91 514 aa16.97■□□□□ 0.31
AFF1-201ENST00000307808 MS4A1P11836 297 aa16.96■□□□□ 0.31
AFF1-201ENST00000307808 SCRIBQ14160 1630 aa16.95■□□□□ 0.3
AFF1-201ENST00000307808 SCAF1Q9H7N4 1312 aaKnown RBP16.94■□□□□ 0.3
AFF1-201ENST00000307808 HSP90AB1P08238 724 aaKnown RBP16.94■□□□□ 0.3
AFF1-201ENST00000307808 GOLGA6L4A6NEF3 574 aa16.93■□□□□ 0.3
AFF1-201ENST00000307808 FGD1P98174 961 aa16.93■□□□□ 0.3
AFF1-201ENST00000307808 NPM1P06748 294 aaKnown RBP eCLIP16.92■□□□□ 0.3
AFF1-201ENST00000307808 NOC3LQ8WTT2 800 aaKnown RBP16.91■□□□□ 0.3
AFF1-201ENST00000307808 EIF4G2P78344 907 aaKnown RBP eCLIP16.9■□□□□ 0.3
AFF1-201ENST00000307808 NOP58Q9Y2X3 529 aaKnown RBP16.9■□□□□ 0.3
AFF1-201ENST00000307808 MCCP23508 829 aa16.89■□□□□ 0.29
AFF1-201ENST00000307808 DRC7Q8IY82 874 aa16.89■□□□□ 0.29
AFF1-201ENST00000307808 PLCB2Q00722 1185 aa16.88■□□□□ 0.29
AFF1-201ENST00000307808 PNNQ9H307 717 aaKnown RBP16.88■□□□□ 0.29
AFF1-201ENST00000307808 A0A0G2JS52 829 aa16.87■□□□□ 0.29
AFF1-201ENST00000307808 HSCBQ8IWL3 235 aa16.87■□□□□ 0.29
AFF1-201ENST00000307808 GOLGA6L1Q8N7Z2 621 aa16.87■□□□□ 0.29
AFF1-201ENST00000307808 CSRNP3Q8WYN3 585 aa16.86■□□□□ 0.29
AFF1-201ENST00000307808 TULP1O00294 542 aaPredicted RBP16.86■□□□□ 0.29
AFF1-201ENST00000307808 TNNT3P45378 269 aaPredicted RBP16.86■□□□□ 0.29
AFF1-201ENST00000307808 GOLGA2Q08379 1002 aa16.85■□□□□ 0.29
AFF1-201ENST00000307808 KNSTRNQ9Y448 316 aa16.85■□□□□ 0.29
AFF1-201ENST00000307808 KCNJ4P48050 445 aa16.85■□□□□ 0.29
AFF1-201ENST00000307808 MTUS2Q5JR59 1369 aa16.84■□□□□ 0.29
AFF1-201ENST00000307808 TSPY4P0CV99 314 aa16.84■□□□□ 0.29
AFF1-201ENST00000307808 TSPY10P0CW01 314 aa16.84■□□□□ 0.29
AFF1-201ENST00000307808 P3H3Q8IVL6 736 aa16.84■□□□□ 0.29
AFF1-201ENST00000307808 RSF1Q96T23 1441 aaPredicted RBP16.82■□□□□ 0.28
AFF1-201ENST00000307808 SYAP1Q96A49 352 aaPredicted RBP16.82■□□□□ 0.28
AFF1-201ENST00000307808 ARID3CA6NKF2 412 aa16.82■□□□□ 0.28
AFF1-201ENST00000307808 CCDC34Q96HJ3 373 aa16.8■□□□□ 0.28
AFF1-201ENST00000307808 ABCC9O60706 1549 aa16.79■□□□□ 0.28
AFF1-201ENST00000307808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.79■□□□□ 0.286e-7■■□□□ 12.3
AFF1-201ENST00000307808 MAPK8IP3Q9UPT6 1336 aa16.79■□□□□ 0.28
AFF1-201ENST00000307808 SETQ01105 290 aaPredicted RBP16.78■□□□□ 0.28
AFF1-201ENST00000307808 NPHP1O15259 732 aa16.78■□□□□ 0.28
AFF1-201ENST00000307808 OS9Q13438 667 aaPredicted RBP16.77■□□□□ 0.28
AFF1-201ENST00000307808 GNL2Q13823 731 aaKnown RBP16.77■□□□□ 0.28
AFF1-201ENST00000307808 HTATSF1O43719 755 aaKnown RBP16.77■□□□□ 0.28
AFF1-201ENST00000307808 CLSTN1O94985 981 aa16.77■□□□□ 0.28
AFF1-201ENST00000307808 C14orf37Q86TY3 774 aa16.77■□□□□ 0.28
AFF1-201ENST00000307808 PPP1R15AO75807 674 aaPredicted RBP16.76■□□□□ 0.27
AFF1-201ENST00000307808 IRX6P78412 446 aaPredicted RBP16.75■□□□□ 0.27
AFF1-201ENST00000307808 TPM4P67936 248 aa16.75■□□□□ 0.27
AFF1-201ENST00000307808 ARID4BQ4LE39 1312 aaPredicted RBP16.75■□□□□ 0.27
AFF1-201ENST00000307808 TPRNQ4KMQ1 711 aa16.75■□□□□ 0.27
AFF1-201ENST00000307808 GBP4Q96PP9 640 aa16.75■□□□□ 0.27
AFF1-201ENST00000307808 KDM2AQ9Y2K7 1162 aa16.74■□□□□ 0.27
AFF1-201ENST00000307808 HAP1P54257 671 aaPredicted RBP16.74■□□□□ 0.27
AFF1-201ENST00000307808 NUDCQ9Y266 331 aa16.73■□□□□ 0.27
AFF1-201ENST00000307808 PPP4R2Q9NY27 417 aa16.73■□□□□ 0.27
AFF1-201ENST00000307808 A0A0U1RQG5 324 aaPredicted RBP16.72■□□□□ 0.27
AFF1-201ENST00000307808 PHF14O94880 888 aa16.71■□□□□ 0.27
AFF1-201ENST00000307808 NAP1L2Q9ULW6 460 aaPredicted RBP16.71■□□□□ 0.27
AFF1-201ENST00000307808 LAS1LQ9Y4W2 734 aaKnown RBP16.69■□□□□ 0.26
AFF1-201ENST00000307808 RTN4Q9NQC3 1192 aaKnown RBP16.68■□□□□ 0.26
AFF1-201ENST00000307808 CALRP27797 417 aaKnown RBP16.68■□□□□ 0.26
AFF1-201ENST00000307808 CSPP1Q1MSJ5 1256 aa16.67■□□□□ 0.26
AFF1-201ENST00000307808 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
AFF1-201ENST00000307808 KIAA1211Q6ZU35 1233 aa16.66■□□□□ 0.26
AFF1-201ENST00000307808 CLIP1P30622 1438 aa16.64■□□□□ 0.25
AFF1-201ENST00000307808 AMER1Q5JTC6 1135 aaPredicted RBP16.64■□□□□ 0.25
AFF1-201ENST00000307808 MIER1Q8N108 512 aa16.64■□□□□ 0.25
AFF1-201ENST00000307808 ZBTB7CA1YPR0 619 aa16.64■□□□□ 0.25
AFF1-201ENST00000307808 PABPN1Q86U42 306 aaKnown RBP eCLIP16.64■□□□□ 0.25
AFF1-201ENST00000307808 EEA1Q15075 1411 aa16.62■□□□□ 0.25
AFF1-201ENST00000307808 RGS3P49796 1198 aa16.62■□□□□ 0.25
AFF1-201ENST00000307808 SUPT16HQ9Y5B9 1047 aaKnown RBP16.61■□□□□ 0.25
AFF1-201ENST00000307808 CHIC2Q9UKJ5 165 aa16.6■□□□□ 0.25
AFF1-201ENST00000307808 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
AFF1-201ENST00000307808 GOLGA3Q08378 1498 aa16.59■□□□□ 0.25
AFF1-201ENST00000307808 CHMP4AQ9BY43 222 aa16.58■□□□□ 0.24
AFF1-201ENST00000307808 GPATCH3Q96I76 525 aa16.57■□□□□ 0.24
AFF1-201ENST00000307808 PRM3Q9NNZ6 103 aa16.56■□□□□ 0.24
AFF1-201ENST00000307808 DEKP35659 375 aaKnown RBP16.56■□□□□ 0.24
AFF1-201ENST00000307808 FRAT1Q92837 279 aaPredicted RBP16.55■□□□□ 0.24
AFF1-201ENST00000307808 CCDC70Q6NSX1 233 aa16.54■□□□□ 0.24
AFF1-201ENST00000307808 CALD1Q05682 793 aaKnown RBP16.54■□□□□ 0.24
AFF1-201ENST00000307808 TAOK2Q9UL54 1235 aa16.54■□□□□ 0.24
AFF1-201ENST00000307808 GPS2Q13227 327 aa16.54■□□□□ 0.24
AFF1-201ENST00000307808 CEP89Q96ST8 783 aa16.54■□□□□ 0.24
AFF1-201ENST00000307808 ZCCHC6Q5VYS8 1495 aaKnown RBP16.54■□□□□ 0.24
AFF1-201ENST00000307808 IPO8O15397 1037 aaKnown RBP16.53■□□□□ 0.24
AFF1-201ENST00000307808 TPM3P06753 285 aa16.52■□□□□ 0.23
AFF1-201ENST00000307808 KIF3AQ9Y496 699 aa16.5■□□□□ 0.23
AFF1-201ENST00000307808 CARD11Q9BXL7 1154 aa16.49■□□□□ 0.23
AFF1-201ENST00000307808 RSPH6AQ9H0K4 717 aa16.49■□□□□ 0.23
AFF1-201ENST00000307808 HDAC5Q9UQL6 1122 aa16.48■□□□□ 0.23
AFF1-201ENST00000307808 KANK1Q14678 1352 aa16.48■□□□□ 0.23
AFF1-201ENST00000307808 TSR1Q2NL82 804 aaKnown RBP16.48■□□□□ 0.23
AFF1-201ENST00000307808 GOLGA6L3A6NEY3 463 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms