RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 TIAM1Q13009 1591 aa24.95■■□□□ 1.58
TVP23B-201ENST00000307767 P3H3Q8IVL6 736 aa24.93■■□□□ 1.58
TVP23B-201ENST00000307767 CTTNBP2Q8WZ74 1663 aa24.92■■□□□ 1.58
TVP23B-201ENST00000307767 FHOD3Q2V2M9 1422 aa24.92■■□□□ 1.58
TVP23B-201ENST00000307767 EFCAB5A4FU69 1503 aa24.92■■□□□ 1.58
TVP23B-201ENST00000307767 FHAD1B1AJZ9 1412 aa24.9■■□□□ 1.58
TVP23B-201ENST00000307767 PCF11O94913 1555 aaKnown RBP24.89■■□□□ 1.57
TVP23B-201ENST00000307767 LRRC9Q6ZRR7 1453 aa24.86■■□□□ 1.57
TVP23B-201ENST00000307767 AQRO60306 1485 aaKnown RBP eCLIP24.84■■□□□ 1.57
TVP23B-201ENST00000307767 CCNB3Q8WWL7 1395 aa24.82■■□□□ 1.56
TVP23B-201ENST00000307767 WDR62O43379 1518 aa24.81■■□□□ 1.56
TVP23B-201ENST00000307767 CASKIN1Q8WXD9 1431 aa24.81■■□□□ 1.56
TVP23B-201ENST00000307767 SAMD9Q5K651 1589 aa24.81■■□□□ 1.56
TVP23B-201ENST00000307767 CFAP43Q8NDM7 1665 aa24.8■■□□□ 1.56
TVP23B-201ENST00000307767 FYCO1Q9BQS8 1478 aa24.79■■□□□ 1.56
TVP23B-201ENST00000307767 PBRM1Q86U86 1689 aa24.77■■□□□ 1.56
TVP23B-201ENST00000307767 SNAPC4Q5SXM2 1469 aa24.76■■□□□ 1.55
TVP23B-201ENST00000307767 PHLDB1Q86UU1 1377 aa24.76■■□□□ 1.55
TVP23B-201ENST00000307767 ZNF608Q9ULD9 1512 aaPredicted RBP24.75■■□□□ 1.55
TVP23B-201ENST00000307767 IFT140Q96RY7 1462 aa24.74■■□□□ 1.55
TVP23B-201ENST00000307767 ADAMTS12P58397 1594 aa24.73■■□□□ 1.55
TVP23B-201ENST00000307767 FMN1Q68DA7 1419 aa24.72■■□□□ 1.55
TVP23B-201ENST00000307767 GRIN2BQ13224 1484 aa24.71■■□□□ 1.55
TVP23B-201ENST00000307767 DHX57Q6P158 1386 aaKnown RBP24.69■■□□□ 1.54
TVP23B-201ENST00000307767 ATP1B4Q9UN42 357 aaPredicted RBP24.65■■□□□ 1.54
TVP23B-201ENST00000307767 THOC2Q8NI27 1593 aaKnown RBP24.61■■□□□ 1.53
TVP23B-201ENST00000307767 LRRIQ1Q96JM4 1722 aa24.6■■□□□ 1.53
TVP23B-201ENST00000307767 CLSPNQ9HAW4 1339 aa24.58■■□□□ 1.53
TVP23B-201ENST00000307767 ERCC6Q03468 1493 aa24.58■■□□□ 1.52
TVP23B-201ENST00000307767 IQGAP2Q13576 1575 aa24.57■■□□□ 1.52
TVP23B-201ENST00000307767 ITGAEP38570 1179 aa24.57■■□□□ 1.52
TVP23B-201ENST00000307767 EIF4G3O43432 1585 aaKnown RBP24.54■■□□□ 1.52
TVP23B-201ENST00000307767 UGGT2Q9NYU1 1516 aa24.51■■□□□ 1.51
TVP23B-201ENST00000307767 RAB3GAP2Q9H2M9 1393 aa24.5■■□□□ 1.51
TVP23B-201ENST00000307767 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.49■■□□□ 1.51
TVP23B-201ENST00000307767 ZNF316A6NFI3 1004 aaPredicted RBP24.47■■□□□ 1.51
TVP23B-201ENST00000307767 FAM50AQ14320 339 aaKnown RBP24.47■■□□□ 1.51
TVP23B-201ENST00000307767 KIAA0586Q9BVV6 1533 aa24.46■■□□□ 1.51
TVP23B-201ENST00000307767 GRIN2AQ12879 1464 aa24.46■■□□□ 1.51
TVP23B-201ENST00000307767 MAGI3Q5TCQ9 1506 aa24.46■■□□□ 1.51
TVP23B-201ENST00000307767 MTUS2Q5JR59 1369 aa24.45■■□□□ 1.51
TVP23B-201ENST00000307767 FGD6Q6ZV73 1430 aa24.45■■□□□ 1.5
TVP23B-201ENST00000307767 SETD5Q9C0A6 1442 aa24.45■■□□□ 1.5
TVP23B-201ENST00000307767 DIEXFQ68CQ4 756 aaKnown RBP24.44■■□□□ 1.5
TVP23B-201ENST00000307767 DISP1Q96F81 1524 aa24.42■■□□□ 1.5
TVP23B-201ENST00000307767 NCOA2Q15596 1464 aa24.42■■□□□ 1.5
TVP23B-201ENST00000307767 ARHGEF11O15085 1522 aa24.41■■□□□ 1.5
TVP23B-201ENST00000307767 MAGI1Q96QZ7 1491 aaPredicted RBP24.4■■□□□ 1.5
TVP23B-201ENST00000307767 EHBP1L1Q8N3D4 1523 aa24.39■■□□□ 1.49
TVP23B-201ENST00000307767 MAPKBP1O60336 1514 aa24.38■■□□□ 1.49
TVP23B-201ENST00000307767 CCDC18Q5T9S5 1454 aa24.37■■□□□ 1.49
TVP23B-201ENST00000307767 EPRSP07814 1512 aaKnown RBP24.37■■□□□ 1.49
TVP23B-201ENST00000307767 HECW1Q76N89 1606 aa24.36■■□□□ 1.49
TVP23B-201ENST00000307767 PTPRKQ15262 1439 aa24.35■■□□□ 1.49
TVP23B-201ENST00000307767 MYOM3Q5VTT5 1437 aa24.35■■□□□ 1.49
TVP23B-201ENST00000307767 KIAA0556O60303 1618 aa24.35■■□□□ 1.49
TVP23B-201ENST00000307767 SYNJ2O15056 1496 aa24.34■■□□□ 1.49
TVP23B-201ENST00000307767 CEP170Q5SW79 1584 aa24.32■■□□□ 1.48
TVP23B-201ENST00000307767 SUPT6HQ7KZ85 1726 aaKnown RBP24.32■■□□□ 1.48
TVP23B-201ENST00000307767 CDK13Q14004 1512 aaKnown RBP24.31■■□□□ 1.48
TVP23B-201ENST00000307767 CHMP7Q8WUX9 453 aaPredicted RBP24.27■■□□□ 1.48
TVP23B-201ENST00000307767 NUP160Q12769 1436 aa24.27■■□□□ 1.48
TVP23B-201ENST00000307767 NUP153P49790 1475 aaKnown RBP24.24■■□□□ 1.47
TVP23B-201ENST00000307767 TCOF1Q13428 1488 aaKnown RBP24.22■■□□□ 1.47
TVP23B-201ENST00000307767 PTPN23Q9H3S7 1636 aa24.21■■□□□ 1.47
TVP23B-201ENST00000307767 HFM1A2PYH4 1435 aa24.21■■□□□ 1.47
TVP23B-201ENST00000307767 ARID3CA6NKF2 412 aa24.2■■□□□ 1.46
TVP23B-201ENST00000307767 FBLN2P98095 1184 aa24.17■■□□□ 1.46
TVP23B-201ENST00000307767 RAPGEF6Q8TEU7 1601 aa24.16■■□□□ 1.46
TVP23B-201ENST00000307767 NAIPQ13075 1403 aa24.16■■□□□ 1.46
TVP23B-201ENST00000307767 JPH4Q96JJ6 628 aa24.14■■□□□ 1.45
TVP23B-201ENST00000307767 MIA2Q96PC5 1412 aa24.12■■□□□ 1.45
TVP23B-201ENST00000307767 SIN3AQ96ST3 1273 aa24.12■■□□□ 1.45
TVP23B-201ENST00000307767 PLB1Q6P1J6 1458 aa24.11■■□□□ 1.45
TVP23B-201ENST00000307767 UACAQ9BZF9 1416 aa24.06■■□□□ 1.44
TVP23B-201ENST00000307767 MIER1Q8N108 512 aa24.04■■□□□ 1.44
TVP23B-201ENST00000307767 CARMIL2Q6F5E8 1435 aa24.04■■□□□ 1.44
TVP23B-201ENST00000307767 PRG4Q92954 1404 aaPredicted RBP24.03■■□□□ 1.44
TVP23B-201ENST00000307767 AKNAQ7Z591 1439 aa24.01■■□□□ 1.43
TVP23B-201ENST00000307767 TROQ12816 1431 aaPredicted RBP24■■□□□ 1.43
TVP23B-201ENST00000307767 NEUROD1Q13562 356 aa23.99■■□□□ 1.43
TVP23B-201ENST00000307767 RRP7BPQ9NSQ0 103 aa23.98■■□□□ 1.43
TVP23B-201ENST00000307767 CHIC2Q9UKJ5 165 aa23.98■■□□□ 1.43
TVP23B-201ENST00000307767 TIMELESSQ9UNS1 1208 aa23.98■■□□□ 1.43
TVP23B-201ENST00000307767 ABCA8O94911 1581 aa23.98■■□□□ 1.43
TVP23B-201ENST00000307767 ZNF644Q9H582 1327 aaPredicted RBP23.96■■□□□ 1.43
TVP23B-201ENST00000307767 CDK11AQ9UQ88 783 aaPredicted RBP23.96■■□□□ 1.43
TVP23B-201ENST00000307767 KDM6BO15054 1643 aa23.96■■□□□ 1.43
TVP23B-201ENST00000307767 DENND4BO75064 1496 aaPredicted RBP23.95■■□□□ 1.43
TVP23B-201ENST00000307767 GCC2Q8IWJ2 1684 aa23.95■■□□□ 1.42
TVP23B-201ENST00000307767 ABCC5O15440 1437 aa23.94■■□□□ 1.42
TVP23B-201ENST00000307767 DAPK1P53355 1430 aa23.93■■□□□ 1.42
TVP23B-201ENST00000307767 GPATCH8Q9UKJ3 1502 aaKnown RBP23.9■■□□□ 1.42
TVP23B-201ENST00000307767 KIF14Q15058 1648 aa23.9■■□□□ 1.42
TVP23B-201ENST00000307767 ADCY10Q96PN6 1610 aa23.9■■□□□ 1.42
TVP23B-201ENST00000307767 PPP1R15AO75807 674 aaPredicted RBP23.9■■□□□ 1.42
TVP23B-201ENST00000307767 ATP10BO94823 1461 aa23.9■■□□□ 1.42
TVP23B-201ENST00000307767 DNMT1P26358 1616 aaKnown RBP23.89■■□□□ 1.42
TVP23B-201ENST00000307767 SCAF1Q9H7N4 1312 aaKnown RBP23.89■■□□□ 1.42
TVP23B-201ENST00000307767 ACIN1Q9UKV3 1341 aaKnown RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms