RNA–Protein interactions for RNA: ENST00000305586.11

FXR1-201, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 5 BASIC

Gene FXR1, Length 3,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-201ENST00000305586 FHAD1B1AJZ9 1412 aa16.93■□□□□ 0.3
FXR1-201ENST00000305586 RRBP1Q9P2E9 1410 aaKnown RBP16.93■□□□□ 0.3
FXR1-201ENST00000305586 MAP3K1Q13233 1512 aa16.92■□□□□ 0.3
FXR1-201ENST00000305586 FHOD3Q2V2M9 1422 aa16.92■□□□□ 0.3
FXR1-201ENST00000305586 EFCAB5A4FU69 1503 aa16.91■□□□□ 0.3
FXR1-201ENST00000305586 MRC2Q9UBG0 1479 aa16.9■□□□□ 0.3
FXR1-201ENST00000305586 PCF11O94913 1555 aaKnown RBP16.9■□□□□ 0.3
FXR1-201ENST00000305586 CCNB3Q8WWL7 1395 aa16.87■□□□□ 0.29
FXR1-201ENST00000305586 LRRC9Q6ZRR7 1453 aa16.86■□□□□ 0.29
FXR1-201ENST00000305586 ATP1B4Q9UN42 357 aaPredicted RBP16.86■□□□□ 0.29
FXR1-201ENST00000305586 CFAP43Q8NDM7 1665 aa16.84■□□□□ 0.29
FXR1-201ENST00000305586 AQRO60306 1485 aaKnown RBP eCLIP16.83■□□□□ 0.282e-8■■■■□ 23.5
FXR1-201ENST00000305586 PBRM1Q86U86 1689 aa16.83■□□□□ 0.28
FXR1-201ENST00000305586 FYCO1Q9BQS8 1478 aa16.82■□□□□ 0.28
FXR1-201ENST00000305586 CASKIN1Q8WXD9 1431 aa16.82■□□□□ 0.28
FXR1-201ENST00000305586 FMN1Q68DA7 1419 aa16.8■□□□□ 0.28
FXR1-201ENST00000305586 SAMD9Q5K651 1589 aa16.79■□□□□ 0.28
FXR1-201ENST00000305586 PHLDB1Q86UU1 1377 aa16.78■□□□□ 0.28
FXR1-201ENST00000305586 WDR62O43379 1518 aa16.78■□□□□ 0.28
FXR1-201ENST00000305586 ITGAEP38570 1179 aa16.78■□□□□ 0.28
FXR1-201ENST00000305586 DHX57Q6P158 1386 aaKnown RBP16.76■□□□□ 0.27
FXR1-201ENST00000305586 ADAMTS12P58397 1594 aa16.76■□□□□ 0.27
FXR1-201ENST00000305586 SNAPC4Q5SXM2 1469 aa16.76■□□□□ 0.27
FXR1-201ENST00000305586 IFT140Q96RY7 1462 aa16.76■□□□□ 0.27
FXR1-201ENST00000305586 GRIN2BQ13224 1484 aa16.75■□□□□ 0.27
FXR1-201ENST00000305586 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
FXR1-201ENST00000305586 ERCC6Q03468 1493 aa16.72■□□□□ 0.27
FXR1-201ENST00000305586 CLSPNQ9HAW4 1339 aa16.71■□□□□ 0.27
FXR1-201ENST00000305586 FAM50AQ14320 339 aaKnown RBP16.69■□□□□ 0.26
FXR1-201ENST00000305586 DIEXFQ68CQ4 756 aaKnown RBP16.69■□□□□ 0.26
FXR1-201ENST00000305586 IQGAP2Q13576 1575 aa16.68■□□□□ 0.26
FXR1-201ENST00000305586 ZNF316A6NFI3 1004 aaPredicted RBP16.68■□□□□ 0.26
FXR1-201ENST00000305586 LRRIQ1Q96JM4 1722 aa16.68■□□□□ 0.26
FXR1-201ENST00000305586 MTUS2Q5JR59 1369 aa16.65■□□□□ 0.26
FXR1-201ENST00000305586 RAB3GAP2Q9H2M9 1393 aa16.65■□□□□ 0.26
FXR1-201ENST00000305586 THOC2Q8NI27 1593 aaKnown RBP16.64■□□□□ 0.25
FXR1-201ENST00000305586 EIF4G3O43432 1585 aaKnown RBP16.64■□□□□ 0.25
FXR1-201ENST00000305586 SETD5Q9C0A6 1442 aa16.62■□□□□ 0.25
FXR1-201ENST00000305586 FGD6Q6ZV73 1430 aa16.59■□□□□ 0.25
FXR1-201ENST00000305586 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.59■□□□□ 0.251e-6■□□□□ 8.8
FXR1-201ENST00000305586 UGGT2Q9NYU1 1516 aa16.59■□□□□ 0.25
FXR1-201ENST00000305586 KIAA0586Q9BVV6 1533 aa16.57■□□□□ 0.24
FXR1-201ENST00000305586 GRIN2AQ12879 1464 aa16.57■□□□□ 0.24
FXR1-201ENST00000305586 NCOA2Q15596 1464 aa16.57■□□□□ 0.24
FXR1-201ENST00000305586 EHBP1L1Q8N3D4 1523 aa16.56■□□□□ 0.24
FXR1-201ENST00000305586 CCDC18Q5T9S5 1454 aa16.56■□□□□ 0.24
FXR1-201ENST00000305586 HECW1Q76N89 1606 aa16.56■□□□□ 0.24
FXR1-201ENST00000305586 SUPT6HQ7KZ85 1726 aaKnown RBP16.55■□□□□ 0.24
FXR1-201ENST00000305586 MAGI3Q5TCQ9 1506 aa16.54■□□□□ 0.24
FXR1-201ENST00000305586 MAGI1Q96QZ7 1491 aaPredicted RBP16.53■□□□□ 0.24
FXR1-201ENST00000305586 MYOM3Q5VTT5 1437 aa16.53■□□□□ 0.24
FXR1-201ENST00000305586 MAPKBP1O60336 1514 aa16.52■□□□□ 0.24
FXR1-201ENST00000305586 EPRSP07814 1512 aaKnown RBP16.52■□□□□ 0.24
FXR1-201ENST00000305586 DISP1Q96F81 1524 aa16.52■□□□□ 0.23
FXR1-201ENST00000305586 KIAA0556O60303 1618 aa16.51■□□□□ 0.23
FXR1-201ENST00000305586 CHMP7Q8WUX9 453 aaPredicted RBP16.51■□□□□ 0.23
FXR1-201ENST00000305586 CDK13Q14004 1512 aaKnown RBP16.5■□□□□ 0.23
FXR1-201ENST00000305586 SYNJ2O15056 1496 aa16.49■□□□□ 0.23
FXR1-201ENST00000305586 ARHGEF11O15085 1522 aa16.49■□□□□ 0.23
FXR1-201ENST00000305586 ARID3CA6NKF2 412 aa16.49■□□□□ 0.23
FXR1-201ENST00000305586 FBLN2P98095 1184 aa16.48■□□□□ 0.23
FXR1-201ENST00000305586 PTPRKQ15262 1439 aa16.47■□□□□ 0.23
FXR1-201ENST00000305586 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
FXR1-201ENST00000305586 PTPN23Q9H3S7 1636 aa16.46■□□□□ 0.22
FXR1-201ENST00000305586 HFM1A2PYH4 1435 aa16.42■□□□□ 0.22
FXR1-201ENST00000305586 RAPGEF6Q8TEU7 1601 aa16.41■□□□□ 0.22
FXR1-201ENST00000305586 NUP153P49790 1475 aaKnown RBP16.41■□□□□ 0.22
FXR1-201ENST00000305586 NUP160Q12769 1436 aa16.4■□□□□ 0.22
FXR1-201ENST00000305586 SIN3AQ96ST3 1273 aa16.4■□□□□ 0.22
FXR1-201ENST00000305586 TCOF1Q13428 1488 aaKnown RBP16.4■□□□□ 0.22
FXR1-201ENST00000305586 NAIPQ13075 1403 aa16.38■□□□□ 0.21
FXR1-201ENST00000305586 NEUROD1Q13562 356 aa16.37■□□□□ 0.21
FXR1-201ENST00000305586 JPH4Q96JJ6 628 aa16.37■□□□□ 0.21
FXR1-201ENST00000305586 MIER1Q8N108 512 aa16.37■□□□□ 0.21
FXR1-201ENST00000305586 MIA2Q96PC5 1412 aa16.36■□□□□ 0.21
FXR1-201ENST00000305586 CARMIL2Q6F5E8 1435 aa16.35■□□□□ 0.21
FXR1-201ENST00000305586 PLB1Q6P1J6 1458 aa16.34■□□□□ 0.21
FXR1-201ENST00000305586 CHIC2Q9UKJ5 165 aa16.34■□□□□ 0.21
FXR1-201ENST00000305586 UACAQ9BZF9 1416 aa16.34■□□□□ 0.21
FXR1-201ENST00000305586 CDK11AQ9UQ88 783 aaPredicted RBP16.33■□□□□ 0.2
FXR1-201ENST00000305586 RRP7BPQ9NSQ0 103 aa16.32■□□□□ 0.2
FXR1-201ENST00000305586 TIMELESSQ9UNS1 1208 aa16.29■□□□□ 0.2
FXR1-201ENST00000305586 ACIN1Q9UKV3 1341 aaKnown RBP16.29■□□□□ 0.2
FXR1-201ENST00000305586 PRG4Q92954 1404 aaPredicted RBP16.29■□□□□ 0.2
FXR1-201ENST00000305586 SCAF1Q9H7N4 1312 aaKnown RBP16.28■□□□□ 0.2
FXR1-201ENST00000305586 GCC2Q8IWJ2 1684 aa16.28■□□□□ 0.2
FXR1-201ENST00000305586 TROQ12816 1431 aaPredicted RBP16.28■□□□□ 0.2
FXR1-201ENST00000305586 CENPBP07199 599 aaPredicted RBP16.27■□□□□ 0.2
FXR1-201ENST00000305586 AKNAQ7Z591 1439 aa16.27■□□□□ 0.19
FXR1-201ENST00000305586 ZNF644Q9H582 1327 aaPredicted RBP16.25■□□□□ 0.19
FXR1-201ENST00000305586 DAPK1P53355 1430 aa16.24■□□□□ 0.19
FXR1-201ENST00000305586 KDM6BO15054 1643 aa16.24■□□□□ 0.19
FXR1-201ENST00000305586 PPP1R15AO75807 674 aaPredicted RBP16.23■□□□□ 0.19
FXR1-201ENST00000305586 ABCA8O94911 1581 aa16.23■□□□□ 0.19
FXR1-201ENST00000305586 YTHDC1Q96MU7 727 aaKnown RBP16.22■□□□□ 0.19
FXR1-201ENST00000305586 DNMT1P26358 1616 aaKnown RBP16.22■□□□□ 0.19
FXR1-201ENST00000305586 ABCC5O15440 1437 aa16.22■□□□□ 0.19
FXR1-201ENST00000305586 KIF14Q15058 1648 aa16.22■□□□□ 0.19
FXR1-201ENST00000305586 TRIM52Q96A61 297 aa16.21■□□□□ 0.19
FXR1-201ENST00000305586 TONSLQ96HA7 1378 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms