RNA–Protein interactions for RNA: ENST00000305354.4

TM4SF4-201, Transcript of transmembrane 4 L six family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF4, Length 2,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4-201ENST00000305354 CCNB3Q8WWL7 1395 aa22.89■■□□□ 1.26
TM4SF4-201ENST00000305354 DIEXFQ68CQ4 756 aaKnown RBP22.85■■□□□ 1.25
TM4SF4-201ENST00000305354 PCF11O94913 1555 aaKnown RBP22.85■■□□□ 1.25
TM4SF4-201ENST00000305354 LRRC9Q6ZRR7 1453 aa22.85■■□□□ 1.25
TM4SF4-201ENST00000305354 KIF21AQ7Z4S6 1674 aa22.85■■□□□ 1.25
TM4SF4-201ENST00000305354 ZNF316A6NFI3 1004 aaPredicted RBP22.84■■□□□ 1.25
TM4SF4-201ENST00000305354 AQRO60306 1485 aaKnown RBP eCLIP22.84■■□□□ 1.25
TM4SF4-201ENST00000305354 FYCO1Q9BQS8 1478 aa22.83■■□□□ 1.25
TM4SF4-201ENST00000305354 DHX57Q6P158 1386 aaKnown RBP22.8■■□□□ 1.24
TM4SF4-201ENST00000305354 GAPVD1Q14C86 1478 aa22.8■■□□□ 1.24
TM4SF4-201ENST00000305354 CASKIN1Q8WXD9 1431 aa22.77■■□□□ 1.24
TM4SF4-201ENST00000305354 FHOD3Q2V2M9 1422 aa22.76■■□□□ 1.23
TM4SF4-201ENST00000305354 TARBP1Q13395 1621 aaKnown RBP22.75■■□□□ 1.23
TM4SF4-201ENST00000305354 FMN1Q68DA7 1419 aa22.74■■□□□ 1.23
TM4SF4-201ENST00000305354 SAMD9Q5K651 1589 aa22.73■■□□□ 1.23
TM4SF4-201ENST00000305354 TDRD9Q8NDG6 1382 aaKnown RBP22.72■■□□□ 1.23
TM4SF4-201ENST00000305354 DNAJC5BQ9UF47 199 aa22.67■■□□□ 1.22
TM4SF4-201ENST00000305354 PHLDB1Q86UU1 1377 aa22.67■■□□□ 1.22
TM4SF4-201ENST00000305354 P3H3Q8IVL6 736 aa22.66■■□□□ 1.22
TM4SF4-201ENST00000305354 SNAPC4Q5SXM2 1469 aa22.65■■□□□ 1.22
TM4SF4-201ENST00000305354 MRC2Q9UBG0 1479 aa22.64■■□□□ 1.22
TM4SF4-201ENST00000305354 PBRM1Q86U86 1689 aa22.63■■□□□ 1.21
TM4SF4-201ENST00000305354 THOC2Q8NI27 1593 aaKnown RBP22.63■■□□□ 1.21
TM4SF4-201ENST00000305354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.62■■□□□ 1.21
TM4SF4-201ENST00000305354 RAB3GAP2Q9H2M9 1393 aa22.58■■□□□ 1.21
TM4SF4-201ENST00000305354 SETD5Q9C0A6 1442 aa22.57■■□□□ 1.2
TM4SF4-201ENST00000305354 ADAMTS12P58397 1594 aa22.56■■□□□ 1.2
TM4SF4-201ENST00000305354 ATP1B4Q9UN42 357 aaPredicted RBP22.55■■□□□ 1.2
TM4SF4-201ENST00000305354 GRIN2BQ13224 1484 aa22.55■■□□□ 1.2
TM4SF4-201ENST00000305354 ITGAEP38570 1179 aa22.54■■□□□ 1.2
TM4SF4-201ENST00000305354 CENPBP07199 599 aaPredicted RBP22.51■■□□□ 1.19
TM4SF4-201ENST00000305354 LRRIQ1Q96JM4 1722 aa22.5■■□□□ 1.19
TM4SF4-201ENST00000305354 IFT140Q96RY7 1462 aa22.49■■□□□ 1.19
TM4SF4-201ENST00000305354 WDR62O43379 1518 aa22.49■■□□□ 1.19
TM4SF4-201ENST00000305354 IQGAP2Q13576 1575 aa22.49■■□□□ 1.19
TM4SF4-201ENST00000305354 MAPKBP1O60336 1514 aa22.49■■□□□ 1.19
TM4SF4-201ENST00000305354 FAM50AQ14320 339 aaKnown RBP22.49■■□□□ 1.19
TM4SF4-201ENST00000305354 ACIN1Q9UKV3 1341 aaKnown RBP22.48■■□□□ 1.19
TM4SF4-201ENST00000305354 FGD6Q6ZV73 1430 aa22.48■■□□□ 1.19
TM4SF4-201ENST00000305354 EHBP1L1Q8N3D4 1523 aa22.47■■□□□ 1.19
TM4SF4-201ENST00000305354 MTUS2Q5JR59 1369 aa22.47■■□□□ 1.19
TM4SF4-201ENST00000305354 SCAF1Q9H7N4 1312 aaKnown RBP22.47■■□□□ 1.19
TM4SF4-201ENST00000305354 CCDC18Q5T9S5 1454 aa22.46■■□□□ 1.19
TM4SF4-201ENST00000305354 SUPT6HQ7KZ85 1726 aaKnown RBP22.44■■□□□ 1.18
TM4SF4-201ENST00000305354 HECW1Q76N89 1606 aa22.42■■□□□ 1.18
TM4SF4-201ENST00000305354 NCOA2Q15596 1464 aa22.4■■□□□ 1.18
TM4SF4-201ENST00000305354 UGGT2Q9NYU1 1516 aa22.39■■□□□ 1.17
TM4SF4-201ENST00000305354 MYOM3Q5VTT5 1437 aa22.38■■□□□ 1.17
TM4SF4-201ENST00000305354 NEUROD1Q13562 356 aa22.37■■□□□ 1.17
TM4SF4-201ENST00000305354 ARHGEF11O15085 1522 aa22.37■■□□□ 1.17
TM4SF4-201ENST00000305354 MIER1Q8N108 512 aa22.33■■□□□ 1.17
TM4SF4-201ENST00000305354 ZNF608Q9ULD9 1512 aaPredicted RBP22.33■■□□□ 1.16
TM4SF4-201ENST00000305354 HFM1A2PYH4 1435 aa22.31■■□□□ 1.16
TM4SF4-201ENST00000305354 TIMELESSQ9UNS1 1208 aa22.3■■□□□ 1.16
TM4SF4-201ENST00000305354 KIAA0586Q9BVV6 1533 aa22.3■■□□□ 1.16
TM4SF4-201ENST00000305354 EIF4G3O43432 1585 aaKnown RBP22.29■■□□□ 1.16
TM4SF4-201ENST00000305354 MAGI3Q5TCQ9 1506 aa22.29■■□□□ 1.16
TM4SF4-201ENST00000305354 EPRSP07814 1512 aaKnown RBP22.29■■□□□ 1.16
TM4SF4-201ENST00000305354 PTPN23Q9H3S7 1636 aa22.29■■□□□ 1.16
TM4SF4-201ENST00000305354 TCOF1Q13428 1488 aaKnown RBP22.27■■□□□ 1.15
TM4SF4-201ENST00000305354 KIAA0556O60303 1618 aa22.25■■□□□ 1.15
TM4SF4-201ENST00000305354 GRIN2AQ12879 1464 aa22.24■■□□□ 1.15
TM4SF4-201ENST00000305354 ERCC6Q03468 1493 aa22.23■■□□□ 1.15
TM4SF4-201ENST00000305354 PTPRKQ15262 1439 aa22.23■■□□□ 1.15
TM4SF4-201ENST00000305354 MAGI1Q96QZ7 1491 aaPredicted RBP22.22■■□□□ 1.15
TM4SF4-201ENST00000305354 UACAQ9BZF9 1416 aa22.21■■□□□ 1.15
TM4SF4-201ENST00000305354 DISP1Q96F81 1524 aa22.2■■□□□ 1.14
TM4SF4-201ENST00000305354 NAIPQ13075 1403 aa22.19■■□□□ 1.14
TM4SF4-201ENST00000305354 MIA2Q96PC5 1412 aa22.19■■□□□ 1.14
TM4SF4-201ENST00000305354 CDK13Q14004 1512 aaKnown RBP22.18■■□□□ 1.14
TM4SF4-201ENST00000305354 AKNAQ7Z591 1439 aa22.18■■□□□ 1.14
TM4SF4-201ENST00000305354 GCC2Q8IWJ2 1684 aa22.16■■□□□ 1.14
TM4SF4-201ENST00000305354 SYNJ2O15056 1496 aa22.14■■□□□ 1.13
TM4SF4-201ENST00000305354 RAPGEF6Q8TEU7 1601 aa22.14■■□□□ 1.13
TM4SF4-201ENST00000305354 SIN3AQ96ST3 1273 aa22.13■■□□□ 1.13
TM4SF4-201ENST00000305354 GTF3C3Q9Y5Q9 886 aa22.12■■□□□ 1.13
TM4SF4-201ENST00000305354 YTHDC1Q96MU7 727 aaKnown RBP22.11■■□□□ 1.13
TM4SF4-201ENST00000305354 NUP153P49790 1475 aaKnown RBP22.09■■□□□ 1.13
TM4SF4-201ENST00000305354 CEP170Q5SW79 1584 aa22.08■■□□□ 1.13
TM4SF4-201ENST00000305354 PPP1R15AO75807 674 aaPredicted RBP22.05■■□□□ 1.12
TM4SF4-201ENST00000305354 NUP160Q12769 1436 aa22.03■■□□□ 1.12
TM4SF4-201ENST00000305354 TONSLQ96HA7 1378 aa22.03■■□□□ 1.12
TM4SF4-201ENST00000305354 CHMP7Q8WUX9 453 aaPredicted RBP22.01■■□□□ 1.11
TM4SF4-201ENST00000305354 CDK11AQ9UQ88 783 aaPredicted RBP22.01■■□□□ 1.11
TM4SF4-201ENST00000305354 CARMIL2Q6F5E8 1435 aa21.99■■□□□ 1.11
TM4SF4-201ENST00000305354 DNMT1P26358 1616 aaKnown RBP21.99■■□□□ 1.11
TM4SF4-201ENST00000305354 ROCK1Q13464 1354 aa21.99■■□□□ 1.11
TM4SF4-201ENST00000305354 TROQ12816 1431 aaPredicted RBP21.96■■□□□ 1.11
TM4SF4-201ENST00000305354 ADCY10Q96PN6 1610 aa21.96■■□□□ 1.11
TM4SF4-201ENST00000305354 DAPK1P53355 1430 aa21.96■■□□□ 1.11
TM4SF4-201ENST00000305354 ITSN2Q9NZM3 1697 aa21.95■■□□□ 1.11
TM4SF4-201ENST00000305354 RRP7BPQ9NSQ0 103 aa21.94■■□□□ 1.1
TM4SF4-201ENST00000305354 KDM6BO15054 1643 aa21.92■■□□□ 1.1
TM4SF4-201ENST00000305354 ARID3CA6NKF2 412 aa21.92■■□□□ 1.1
TM4SF4-201ENST00000305354 PELP1Q8IZL8 1130 aaKnown RBP21.91■■□□□ 1.1
TM4SF4-201ENST00000305354 CHIC2Q9UKJ5 165 aa21.91■■□□□ 1.1
TM4SF4-201ENST00000305354 ABCC5O15440 1437 aa21.9■■□□□ 1.1
TM4SF4-201ENST00000305354 PLB1Q6P1J6 1458 aa21.9■■□□□ 1.1
TM4SF4-201ENST00000305354 KDM5BQ9UGL1 1544 aa21.9■■□□□ 1.1
TM4SF4-201ENST00000305354 DENND4BO75064 1496 aaPredicted RBP21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms