RNA–Protein interactions for RNA: ENST00000299961.5

HTR3A-201, Transcript of 5-hydroxytryptamine receptor 3A, humanhuman

TSL 2 BASIC

Gene HTR3A, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3A-201ENST00000299961 CFAP43Q8NDM7 1665 aa20.48■□□□□ 0.87
HTR3A-201ENST00000299961 CCNB3Q8WWL7 1395 aa20.46■□□□□ 0.87
HTR3A-201ENST00000299961 PELP1Q8IZL8 1130 aaKnown RBP20.45■□□□□ 0.86
HTR3A-201ENST00000299961 PCF11O94913 1555 aaKnown RBP20.44■□□□□ 0.86
HTR3A-201ENST00000299961 CLSPNQ9HAW4 1339 aa20.44■□□□□ 0.86
HTR3A-201ENST00000299961 GAPVD1Q14C86 1478 aa20.44■□□□□ 0.86
HTR3A-201ENST00000299961 AQRO60306 1485 aaKnown RBP eCLIP20.42■□□□□ 0.86
HTR3A-201ENST00000299961 LRRC9Q6ZRR7 1453 aa20.42■□□□□ 0.86
HTR3A-201ENST00000299961 FYCO1Q9BQS8 1478 aa20.42■□□□□ 0.86
HTR3A-201ENST00000299961 TARBP1Q13395 1621 aaKnown RBP20.39■□□□□ 0.85
HTR3A-201ENST00000299961 TDRD9Q8NDG6 1382 aaKnown RBP20.38■□□□□ 0.85
HTR3A-201ENST00000299961 FHOD3Q2V2M9 1422 aa20.37■□□□□ 0.85
HTR3A-201ENST00000299961 CASKIN1Q8WXD9 1431 aa20.37■□□□□ 0.85
HTR3A-201ENST00000299961 DIEXFQ68CQ4 756 aaKnown RBP20.36■□□□□ 0.85
HTR3A-201ENST00000299961 FMN1Q68DA7 1419 aa20.36■□□□□ 0.85
HTR3A-201ENST00000299961 ZNF316A6NFI3 1004 aaPredicted RBP20.35■□□□□ 0.85
HTR3A-201ENST00000299961 DHX57Q6P158 1386 aaKnown RBP20.34■□□□□ 0.85
HTR3A-201ENST00000299961 SAMD9Q5K651 1589 aa20.33■□□□□ 0.85
HTR3A-201ENST00000299961 MRC2Q9UBG0 1479 aa20.33■□□□□ 0.84
HTR3A-201ENST00000299961 P3H3Q8IVL6 736 aa20.32■□□□□ 0.84
HTR3A-201ENST00000299961 PBRM1Q86U86 1689 aa20.31■□□□□ 0.84
HTR3A-201ENST00000299961 SCAF1Q9H7N4 1312 aaKnown RBP20.31■□□□□ 0.84
HTR3A-201ENST00000299961 ERCC6Q03468 1493 aa20.28■□□□□ 0.84
HTR3A-201ENST00000299961 PHLDB1Q86UU1 1377 aa20.26■□□□□ 0.83
HTR3A-201ENST00000299961 SNAPC4Q5SXM2 1469 aa20.25■□□□□ 0.83
HTR3A-201ENST00000299961 THOC2Q8NI27 1593 aaKnown RBP20.25■□□□□ 0.83
HTR3A-201ENST00000299961 ATP1B4Q9UN42 357 aaPredicted RBP20.23■□□□□ 0.83
HTR3A-201ENST00000299961 ADAMTS12P58397 1594 aa20.22■□□□□ 0.83
HTR3A-201ENST00000299961 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.2■□□□□ 0.82
HTR3A-201ENST00000299961 WDR62O43379 1518 aa20.19■□□□□ 0.82
HTR3A-201ENST00000299961 IFT140Q96RY7 1462 aa20.19■□□□□ 0.82
HTR3A-201ENST00000299961 GRIN2BQ13224 1484 aa20.18■□□□□ 0.82
HTR3A-201ENST00000299961 ITGAEP38570 1179 aa20.18■□□□□ 0.82
HTR3A-201ENST00000299961 SETD5Q9C0A6 1442 aa20.17■□□□□ 0.82
HTR3A-201ENST00000299961 RAB3GAP2Q9H2M9 1393 aa20.17■□□□□ 0.82
HTR3A-201ENST00000299961 IQGAP2Q13576 1575 aa20.15■□□□□ 0.82
HTR3A-201ENST00000299961 FAM50AQ14320 339 aaKnown RBP20.14■□□□□ 0.81
HTR3A-201ENST00000299961 ACIN1Q9UKV3 1341 aaKnown RBP20.14■□□□□ 0.81
HTR3A-201ENST00000299961 MTUS2Q5JR59 1369 aa20.13■□□□□ 0.81
HTR3A-201ENST00000299961 LRRIQ1Q96JM4 1722 aa20.13■□□□□ 0.81
HTR3A-201ENST00000299961 EHBP1L1Q8N3D4 1523 aa20.12■□□□□ 0.81
HTR3A-201ENST00000299961 CCDC18Q5T9S5 1454 aa20.11■□□□□ 0.81
HTR3A-201ENST00000299961 SUPT6HQ7KZ85 1726 aaKnown RBP20.1■□□□□ 0.81
HTR3A-201ENST00000299961 FGD6Q6ZV73 1430 aa20.1■□□□□ 0.81
HTR3A-201ENST00000299961 HECW1Q76N89 1606 aa20.09■□□□□ 0.81
HTR3A-201ENST00000299961 CENPBP07199 599 aaPredicted RBP20.05■□□□□ 0.8
HTR3A-201ENST00000299961 MAPKBP1O60336 1514 aa20.05■□□□□ 0.8
HTR3A-201ENST00000299961 UGGT2Q9NYU1 1516 aa20.05■□□□□ 0.8
HTR3A-201ENST00000299961 NCOA2Q15596 1464 aa20.03■□□□□ 0.8
HTR3A-201ENST00000299961 MYOM3Q5VTT5 1437 aa20.02■□□□□ 0.8
HTR3A-201ENST00000299961 ZNF608Q9ULD9 1512 aaPredicted RBP20.02■□□□□ 0.8
HTR3A-201ENST00000299961 EIF4G3O43432 1585 aaKnown RBP20.01■□□□□ 0.79
HTR3A-201ENST00000299961 NEUROD1Q13562 356 aa19.99■□□□□ 0.79
HTR3A-201ENST00000299961 ARHGEF11O15085 1522 aa19.99■□□□□ 0.79
HTR3A-201ENST00000299961 KIAA0586Q9BVV6 1533 aa19.98■□□□□ 0.79
HTR3A-201ENST00000299961 EPRSP07814 1512 aaKnown RBP19.95■□□□□ 0.78
HTR3A-201ENST00000299961 PTPN23Q9H3S7 1636 aa19.95■□□□□ 0.78
HTR3A-201ENST00000299961 GRIN2AQ12879 1464 aa19.94■□□□□ 0.78
HTR3A-201ENST00000299961 MAGI1Q96QZ7 1491 aaPredicted RBP19.94■□□□□ 0.78
HTR3A-201ENST00000299961 KIAA0556O60303 1618 aa19.94■□□□□ 0.78
HTR3A-201ENST00000299961 MAGI3Q5TCQ9 1506 aa19.93■□□□□ 0.78
HTR3A-201ENST00000299961 HFM1A2PYH4 1435 aa19.92■□□□□ 0.78
HTR3A-201ENST00000299961 TCOF1Q13428 1488 aaKnown RBP19.91■□□□□ 0.78
HTR3A-201ENST00000299961 TIMELESSQ9UNS1 1208 aa19.9■□□□□ 0.78
HTR3A-201ENST00000299961 MIER1Q8N108 512 aa19.9■□□□□ 0.78
HTR3A-201ENST00000299961 DISP1Q96F81 1524 aa19.87■□□□□ 0.77
HTR3A-201ENST00000299961 MIA2Q96PC5 1412 aa19.86■□□□□ 0.77
HTR3A-201ENST00000299961 CDK13Q14004 1512 aaKnown RBP19.86■□□□□ 0.77
HTR3A-201ENST00000299961 SYNJ2O15056 1496 aa19.85■□□□□ 0.77
HTR3A-201ENST00000299961 PTPRKQ15262 1439 aa19.85■□□□□ 0.77
HTR3A-201ENST00000299961 UACAQ9BZF9 1416 aa19.85■□□□□ 0.77
HTR3A-201ENST00000299961 RAPGEF6Q8TEU7 1601 aa19.84■□□□□ 0.77
HTR3A-201ENST00000299961 NAIPQ13075 1403 aa19.82■□□□□ 0.76
HTR3A-201ENST00000299961 GCC2Q8IWJ2 1684 aa19.82■□□□□ 0.76
HTR3A-201ENST00000299961 AKNAQ7Z591 1439 aa19.81■□□□□ 0.76
HTR3A-201ENST00000299961 CEP170Q5SW79 1584 aa19.8■□□□□ 0.76
HTR3A-201ENST00000299961 GTF3C3Q9Y5Q9 886 aa19.79■□□□□ 0.76
HTR3A-201ENST00000299961 CHMP7Q8WUX9 453 aaPredicted RBP19.78■□□□□ 0.76
HTR3A-201ENST00000299961 SIN3AQ96ST3 1273 aa19.77■□□□□ 0.75
HTR3A-201ENST00000299961 NUP153P49790 1475 aaKnown RBP19.77■□□□□ 0.75
HTR3A-201ENST00000299961 CDK11AQ9UQ88 783 aaPredicted RBP19.75■□□□□ 0.75
HTR3A-201ENST00000299961 NUP160Q12769 1436 aa19.74■□□□□ 0.75
HTR3A-201ENST00000299961 CARMIL2Q6F5E8 1435 aa19.73■□□□□ 0.75
HTR3A-201ENST00000299961 YTHDC1Q96MU7 727 aaKnown RBP19.72■□□□□ 0.75
HTR3A-201ENST00000299961 TONSLQ96HA7 1378 aa19.7■□□□□ 0.74
HTR3A-201ENST00000299961 PPP1R15AO75807 674 aaPredicted RBP19.68■□□□□ 0.74
HTR3A-201ENST00000299961 ITSN2Q9NZM3 1697 aa19.68■□□□□ 0.74
HTR3A-201ENST00000299961 DNMT1P26358 1616 aaKnown RBP19.67■□□□□ 0.74
HTR3A-201ENST00000299961 TROQ12816 1431 aaPredicted RBP19.67■□□□□ 0.74
HTR3A-201ENST00000299961 ARID3CA6NKF2 412 aa19.66■□□□□ 0.74
HTR3A-201ENST00000299961 ADCY10Q96PN6 1610 aa19.66■□□□□ 0.74
HTR3A-201ENST00000299961 ROCK1Q13464 1354 aa19.66■□□□□ 0.74
HTR3A-201ENST00000299961 DAPK1P53355 1430 aa19.64■□□□□ 0.74
HTR3A-201ENST00000299961 FBLN2P98095 1184 aa19.64■□□□□ 0.74
HTR3A-201ENST00000299961 RRP7BPQ9NSQ0 103 aa19.64■□□□□ 0.74
HTR3A-201ENST00000299961 JPH4Q96JJ6 628 aa19.63■□□□□ 0.73
HTR3A-201ENST00000299961 CHIC2Q9UKJ5 165 aa19.62■□□□□ 0.73
HTR3A-201ENST00000299961 PLB1Q6P1J6 1458 aa19.61■□□□□ 0.73
HTR3A-201ENST00000299961 ABCC5O15440 1437 aa19.59■□□□□ 0.73
HTR3A-201ENST00000299961 KDM6BO15054 1643 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms