RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 ARAP1Q96P48 1450 aa24.35■■□□□ 1.49
CHRNA5-201ENST00000299565 CARMIL1Q5VZK9 1371 aa24.34■■□□□ 1.49
CHRNA5-201ENST00000299565 TSHZ2Q9NRE2 1034 aa24.29■■□□□ 1.48
CHRNA5-201ENST00000299565 FAM9BQ8IZU0 186 aa24.27■■□□□ 1.48
CHRNA5-201ENST00000299565 MTUS2Q5JR59 1369 aa24.27■■□□□ 1.48
CHRNA5-201ENST00000299565 SETD5Q9C0A6 1442 aa24.24■■□□□ 1.47
CHRNA5-201ENST00000299565 BICRAQ9NZM4 1560 aa24.23■■□□□ 1.47
CHRNA5-201ENST00000299565 UNC13AQ9UPW8 1703 aa24.21■■□□□ 1.47
CHRNA5-201ENST00000299565 FHOD3Q2V2M9 1422 aa24.15■■□□□ 1.46
CHRNA5-201ENST00000299565 FOXD1Q16676 465 aa24.14■■□□□ 1.46
CHRNA5-201ENST00000299565 IGF1RP08069 1367 aa24.13■■□□□ 1.45
CHRNA5-201ENST00000299565 PPP1R15AO75807 674 aaPredicted RBP24.13■■□□□ 1.45
CHRNA5-201ENST00000299565 PHLDB1Q86UU1 1377 aa24.13■■□□□ 1.45
CHRNA5-201ENST00000299565 PRXQ9BXM0 1461 aa24.13■■□□□ 1.45
CHRNA5-201ENST00000299565 ZNF777Q9ULD5 760 aaPredicted RBP24.12■■□□□ 1.45
CHRNA5-201ENST00000299565 ARHGAP35Q9NRY4 1499 aa24.11■■□□□ 1.45
CHRNA5-201ENST00000299565 CDK11AQ9UQ88 783 aaPredicted RBP24.11■■□□□ 1.45
CHRNA5-201ENST00000299565 FBLN2P98095 1184 aa24.08■■□□□ 1.44
CHRNA5-201ENST00000299565 ANP32EQ9BTT0 268 aa24.05■■□□□ 1.44
CHRNA5-201ENST00000299565 CUX1P39880 1505 aa24.03■■□□□ 1.44
CHRNA5-201ENST00000299565 TOP2BQ02880 1626 aa24.03■■□□□ 1.44
CHRNA5-201ENST00000299565 MRS2Q9HD23 443 aa24.03■■□□□ 1.44
CHRNA5-201ENST00000299565 RRBP1Q9P2E9 1410 aaKnown RBP24.02■■□□□ 1.44
CHRNA5-201ENST00000299565 TDRD9Q8NDG6 1382 aaKnown RBP24.01■■□□□ 1.43
CHRNA5-201ENST00000299565 RBM19Q9Y4C8 960 aaKnown RBP24■■□□□ 1.43
CHRNA5-201ENST00000299565 FHAD1B1AJZ9 1412 aa24■■□□□ 1.43
CHRNA5-201ENST00000299565 SALL2Q9Y467 1007 aaPredicted RBP23.99■■□□□ 1.43
CHRNA5-201ENST00000299565 EIF4G2P78344 907 aaKnown RBP eCLIP23.97■■□□□ 1.43
CHRNA5-201ENST00000299565 CADPSQ9ULU8 1353 aa23.95■■□□□ 1.42
CHRNA5-201ENST00000299565 HSPA5P11021 654 aaKnown RBP23.93■■□□□ 1.42
CHRNA5-201ENST00000299565 ERICH3Q5RHP9 1530 aa23.9■■□□□ 1.42
CHRNA5-201ENST00000299565 RAD54L2Q9Y4B4 1467 aa23.9■■□□□ 1.42
CHRNA5-201ENST00000299565 FGD5Q6ZNL6 1462 aa23.89■■□□□ 1.42
CHRNA5-201ENST00000299565 SLC4A1APQ9BWU0 796 aaKnown RBP23.89■■□□□ 1.41
CHRNA5-201ENST00000299565 B4GALNT3Q6L9W6 998 aa23.88■■□□□ 1.41
CHRNA5-201ENST00000299565 LRRC9Q6ZRR7 1453 aa23.87■■□□□ 1.41
CHRNA5-201ENST00000299565 WDR97A6NE52 1622 aa23.87■■□□□ 1.41
CHRNA5-201ENST00000299565 CCER2I3L3R5 266 aa23.86■■□□□ 1.41
CHRNA5-201ENST00000299565 NCAPD3P42695 1498 aa23.85■■□□□ 1.41
CHRNA5-201ENST00000299565 KDM2AQ9Y2K7 1162 aa23.85■■□□□ 1.41
CHRNA5-201ENST00000299565 PEG3Q9GZU2 1588 aa23.83■■□□□ 1.41
CHRNA5-201ENST00000299565 TIMELESSQ9UNS1 1208 aa23.83■■□□□ 1.4
CHRNA5-201ENST00000299565 CFTRP13569 1480 aa23.81■■□□□ 1.4
CHRNA5-201ENST00000299565 L3MBTL2Q969R5 705 aa23.79■■□□□ 1.4
CHRNA5-201ENST00000299565 NBR1Q14596 966 aa23.75■■□□□ 1.39
CHRNA5-201ENST00000299565 MPHOSPH9Q99550 1183 aa23.73■■□□□ 1.39
CHRNA5-201ENST00000299565 NPM2Q86SE8 214 aaKnown RBP23.72■■□□□ 1.39
CHRNA5-201ENST00000299565 FANCD2Q9BXW9 1451 aa23.71■■□□□ 1.39
CHRNA5-201ENST00000299565 CCDC184Q52MB2 194 aa23.71■■□□□ 1.39
CHRNA5-201ENST00000299565 CCDC18Q5T9S5 1454 aa23.7■■□□□ 1.38
CHRNA5-201ENST00000299565 TIAM1Q13009 1591 aa23.69■■□□□ 1.38
CHRNA5-201ENST00000299565 TMC1Q8TDI8 760 aa23.68■■□□□ 1.38
CHRNA5-201ENST00000299565 CCDC136Q96JN2 1154 aa23.67■■□□□ 1.38
CHRNA5-201ENST00000299565 MAPKBP1O60336 1514 aa23.66■■□□□ 1.38
CHRNA5-201ENST00000299565 FMN1Q68DA7 1419 aa23.66■■□□□ 1.38
CHRNA5-201ENST00000299565 FGD6Q6ZV73 1430 aa23.65■■□□□ 1.38
CHRNA5-201ENST00000299565 NESP48681 1621 aa23.64■■□□□ 1.37
CHRNA5-201ENST00000299565 WASHC2AQ641Q2 1341 aa23.63■■□□□ 1.37
CHRNA5-201ENST00000299565 DNAJC5BQ9UF47 199 aa23.61■■□□□ 1.37
CHRNA5-201ENST00000299565 BIVM-ERCC5R4GMW8 1640 aa23.6■■□□□ 1.37
CHRNA5-201ENST00000299565 ZNF644Q9H582 1327 aaPredicted RBP23.6■■□□□ 1.37
CHRNA5-201ENST00000299565 CFDP1Q9UEE9 299 aaPredicted RBP23.6■■□□□ 1.37
CHRNA5-201ENST00000299565 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.59■■□□□ 1.37
CHRNA5-201ENST00000299565 RGL3Q3MIN7 710 aa23.59■■□□□ 1.37
CHRNA5-201ENST00000299565 PPP4R2Q9NY27 417 aa23.59■■□□□ 1.37
CHRNA5-201ENST00000299565 MYT1LQ9UL68 1186 aa23.58■■□□□ 1.37
CHRNA5-201ENST00000299565 PRKRIP1Q9H875 184 aaPredicted RBP23.54■■□□□ 1.36
CHRNA5-201ENST00000299565 BCL11AQ9H165 835 aa23.53■■□□□ 1.36
CHRNA5-201ENST00000299565 PCF11O94913 1555 aaKnown RBP23.52■■□□□ 1.36
CHRNA5-201ENST00000299565 C11orf95C9JLR9 678 aaPredicted RBP23.51■■□□□ 1.35
CHRNA5-201ENST00000299565 HMGXB3Q12766 1538 aa23.51■■□□□ 1.35
CHRNA5-201ENST00000299565 RTL5Q5HYW3 569 aaPredicted RBP23.51■■□□□ 1.35
CHRNA5-201ENST00000299565 UACAQ9BZF9 1416 aa23.5■■□□□ 1.35
CHRNA5-201ENST00000299565 CHMP7Q8WUX9 453 aaPredicted RBP23.5■■□□□ 1.35
CHRNA5-201ENST00000299565 CASKIN1Q8WXD9 1431 aa23.5■■□□□ 1.35
CHRNA5-201ENST00000299565 CARD11Q9BXL7 1154 aa23.49■■□□□ 1.35
CHRNA5-201ENST00000299565 PKD2Q13563 968 aa23.48■■□□□ 1.35
CHRNA5-201ENST00000299565 NCOA2Q15596 1464 aa23.47■■□□□ 1.35
CHRNA5-201ENST00000299565 ANP32AP39687 249 aaKnown RBP23.47■■□□□ 1.35
CHRNA5-201ENST00000299565 PTPRKQ15262 1439 aa23.46■■□□□ 1.35
CHRNA5-201ENST00000299565 NBPF8Q3BBV2 869 aa23.45■■□□□ 1.34
CHRNA5-201ENST00000299565 POLA1P09884 1462 aaPredicted RBP23.44■■□□□ 1.34
CHRNA5-201ENST00000299565 MYOM3Q5VTT5 1437 aa23.44■■□□□ 1.34
CHRNA5-201ENST00000299565 TSPY4P0CV99 314 aa23.43■■□□□ 1.34
CHRNA5-201ENST00000299565 TSPY10P0CW01 314 aa23.43■■□□□ 1.34
CHRNA5-201ENST00000299565 DCAF11Q8TEB1 546 aa23.41■■□□□ 1.34
CHRNA5-201ENST00000299565 NAIPQ13075 1403 aa23.4■■□□□ 1.34
CHRNA5-201ENST00000299565 FYCO1Q9BQS8 1478 aa23.39■■□□□ 1.34
CHRNA5-201ENST00000299565 MSH5O43196 834 aa23.39■■□□□ 1.33
CHRNA5-201ENST00000299565 AQRO60306 1485 aaKnown RBP eCLIP23.37■■□□□ 1.33
CHRNA5-201ENST00000299565 KIF7Q2M1P5 1343 aa23.37■■□□□ 1.33
CHRNA5-201ENST00000299565 GAPVD1Q14C86 1478 aa23.36■■□□□ 1.33
CHRNA5-201ENST00000299565 HFM1A2PYH4 1435 aa23.36■■□□□ 1.33
CHRNA5-201ENST00000299565 TOPBP1Q92547 1522 aa23.35■■□□□ 1.33
CHRNA5-201ENST00000299565 DAXXQ9UER7 740 aaPredicted RBP23.34■■□□□ 1.33
CHRNA5-201ENST00000299565 ZBTB47Q9UFB7 747 aaPredicted RBP23.34■■□□□ 1.33
CHRNA5-201ENST00000299565 CC2D1BQ5T0F9 858 aaKnown RBP23.33■■□□□ 1.33
CHRNA5-201ENST00000299565 PLEKHD1A6NEE1 506 aa23.33■■□□□ 1.32
CHRNA5-201ENST00000299565 CCDC7Q96M83 1385 aa23.32■■□□□ 1.32
CHRNA5-201ENST00000299565 PDS5BQ9NTI5 1447 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms