RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 RAPGEF2Q9Y4G8 1499 aa20.18■□□□□ 0.82
HMGB2-201ENST00000296503 KIAA0586Q9BVV6 1533 aa20.17■□□□□ 0.82
HMGB2-201ENST00000296503 FAM9AQ8IZU1 332 aaPredicted RBP20.16■□□□□ 0.82
HMGB2-201ENST00000296503 CSRNP3Q8WYN3 585 aa20.16■□□□□ 0.82
HMGB2-201ENST00000296503 PRG4Q92954 1404 aaPredicted RBP20.15■□□□□ 0.82
HMGB2-201ENST00000296503 SHROOM2Q13796 1616 aa20.14■□□□□ 0.81
HMGB2-201ENST00000296503 ERCC6L2Q5T890 1561 aa20.13■□□□□ 0.81
HMGB2-201ENST00000296503 EEA1Q15075 1411 aa20.09■□□□□ 0.81
HMGB2-201ENST00000296503 PRXQ9BXM0 1461 aa20.07■□□□□ 0.8
HMGB2-201ENST00000296503 IQGAP2Q13576 1575 aa20.03■□□□□ 0.8
HMGB2-201ENST00000296503 TTBK1Q5TCY1 1321 aaPredicted RBP20.01■□□□□ 0.79
HMGB2-201ENST00000296503 CARMIL2Q6F5E8 1435 aa19.99■□□□□ 0.79
HMGB2-201ENST00000296503 TRHP20396 242 aaPredicted RBP19.94■□□□□ 0.78
HMGB2-201ENST00000296503 EHMT2Q96KQ7 1210 aa19.93■□□□□ 0.78
HMGB2-201ENST00000296503 CTTNBP2Q8WZ74 1663 aa19.93■□□□□ 0.78
HMGB2-201ENST00000296503 PTPRGP23470 1445 aa19.93■□□□□ 0.78
HMGB2-201ENST00000296503 TNIKQ9UKE5 1360 aa19.92■□□□□ 0.78
HMGB2-201ENST00000296503 UGGT2Q9NYU1 1516 aa19.91■□□□□ 0.78
HMGB2-201ENST00000296503 NPM1P06748 294 aaKnown RBP eCLIP19.89■□□□□ 0.777e-7■■□□□ 14.1
HMGB2-201ENST00000296503 DISP1Q96F81 1524 aa19.89■□□□□ 0.77
HMGB2-201ENST00000296503 RANGAP1P46060 587 aaPredicted RBP19.86■□□□□ 0.77
HMGB2-201ENST00000296503 UBTFP17480 764 aaKnown RBP19.86■□□□□ 0.77
HMGB2-201ENST00000296503 GOLGA3Q08378 1498 aa19.84■□□□□ 0.77
HMGB2-201ENST00000296503 KIF21BO75037 1637 aa19.84■□□□□ 0.77
HMGB2-201ENST00000296503 P3H3Q8IVL6 736 aa19.83■□□□□ 0.76
HMGB2-201ENST00000296503 KIAA0556O60303 1618 aa19.82■□□□□ 0.76
HMGB2-201ENST00000296503 ADCY10Q96PN6 1610 aa19.77■□□□□ 0.76
HMGB2-201ENST00000296503 UACAQ9BZF9 1416 aa19.76■□□□□ 0.75
HMGB2-201ENST00000296503 UHRF1BP1LA0JNW5 1464 aa19.7■□□□□ 0.74
HMGB2-201ENST00000296503 ABCC2Q92887 1545 aa19.69■□□□□ 0.74
HMGB2-201ENST00000296503 PLB1Q6P1J6 1458 aa19.67■□□□□ 0.74
HMGB2-201ENST00000296503 SAMD9Q5K651 1589 aa19.66■□□□□ 0.74
HMGB2-201ENST00000296503 FAM69CQ0P6D2 419 aa19.66■□□□□ 0.74
HMGB2-201ENST00000296503 MAPKBP1O60336 1514 aa19.64■□□□□ 0.73
HMGB2-201ENST00000296503 FHOD3Q2V2M9 1422 aa19.63■□□□□ 0.73
HMGB2-201ENST00000296503 KDM5BQ9UGL1 1544 aa19.61■□□□□ 0.73
HMGB2-201ENST00000296503 ABCA8O94911 1581 aa19.61■□□□□ 0.73
HMGB2-201ENST00000296503 ARID3CA6NKF2 412 aa19.6■□□□□ 0.73
HMGB2-201ENST00000296503 ASXL2Q76L83 1435 aa19.6■□□□□ 0.73
HMGB2-201ENST00000296503 ABCC10Q5T3U5 1492 aa19.6■□□□□ 0.73
HMGB2-201ENST00000296503 EFCAB5A4FU69 1503 aa19.59■□□□□ 0.73
HMGB2-201ENST00000296503 ZCCHC11Q5TAX3 1644 aaKnown RBP19.56■□□□□ 0.72
HMGB2-201ENST00000296503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.56■□□□□ 0.72
HMGB2-201ENST00000296503 HNRNPUL2Q1KMD3 747 aaKnown RBP19.56■□□□□ 0.72
HMGB2-201ENST00000296503 KIF13AQ9H1H9 1805 aa19.55■□□□□ 0.72
HMGB2-201ENST00000296503 ARHGAP35Q9NRY4 1499 aa19.53■□□□□ 0.72
HMGB2-201ENST00000296503 DIP2BQ9P265 1576 aa19.53■□□□□ 0.72
HMGB2-201ENST00000296503 KCNH8Q96L42 1107 aa19.52■□□□□ 0.72
HMGB2-201ENST00000296503 ATP1B4Q9UN42 357 aaPredicted RBP19.52■□□□□ 0.72
HMGB2-201ENST00000296503 RAPGEF6Q8TEU7 1601 aa19.51■□□□□ 0.71
HMGB2-201ENST00000296503 ATP10BO94823 1461 aa19.5■□□□□ 0.71
HMGB2-201ENST00000296503 LOC105371045A0A1W2PR82 267 aa19.49■□□□□ 0.71
HMGB2-201ENST00000296503 FMN1Q68DA7 1419 aa19.47■□□□□ 0.71
HMGB2-201ENST00000296503 WDR7Q9Y4E6 1490 aa19.47■□□□□ 0.71
HMGB2-201ENST00000296503 EPRSP07814 1512 aaKnown RBP19.45■□□□□ 0.7
HMGB2-201ENST00000296503 NUP153P49790 1475 aaKnown RBP19.45■□□□□ 0.7
HMGB2-201ENST00000296503 CLIP1P30622 1438 aa19.45■□□□□ 0.7
HMGB2-201ENST00000296503 TSPOAP1O95153 1857 aa19.43■□□□□ 0.7
HMGB2-201ENST00000296503 PLEKHD1A6NEE1 506 aa19.42■□□□□ 0.7
HMGB2-201ENST00000296503 GLI2P10070 1586 aa19.42■□□□□ 0.7
HMGB2-201ENST00000296503 CD109Q6YHK3 1445 aa19.34■□□□□ 0.69
HMGB2-201ENST00000296503 CDK11AQ9UQ88 783 aaPredicted RBP19.34■□□□□ 0.69
HMGB2-201ENST00000296503 CEP162Q5TB80 1403 aa19.34■□□□□ 0.69
HMGB2-201ENST00000296503 HECW1Q76N89 1606 aa19.34■□□□□ 0.69
HMGB2-201ENST00000296503 CDK13Q14004 1512 aaKnown RBP19.33■□□□□ 0.68
HMGB2-201ENST00000296503 MAP3K4Q9Y6R4 1608 aa19.32■□□□□ 0.68
HMGB2-201ENST00000296503 CASKIN1Q8WXD9 1431 aa19.3■□□□□ 0.68
HMGB2-201ENST00000296503 TEX14Q8IWB6 1497 aa19.29■□□□□ 0.68
HMGB2-201ENST00000296503 PPRC1Q5VV67 1664 aaKnown RBP19.28■□□□□ 0.68
HMGB2-201ENST00000296503 CFAP43Q8NDM7 1665 aa19.28■□□□□ 0.68
HMGB2-201ENST00000296503 PCF11O94913 1555 aaKnown RBP19.26■□□□□ 0.67
HMGB2-201ENST00000296503 KDM6BO15054 1643 aa19.26■□□□□ 0.67
HMGB2-201ENST00000296503 MAGI3Q5TCQ9 1506 aa19.24■□□□□ 0.67
HMGB2-201ENST00000296503 ABCA9Q8IUA7 1624 aa19.23■□□□□ 0.67
HMGB2-201ENST00000296503 FYCO1Q9BQS8 1478 aa19.23■□□□□ 0.67
HMGB2-201ENST00000296503 CCDC18Q5T9S5 1454 aa19.22■□□□□ 0.67
HMGB2-201ENST00000296503 LRRIQ1Q96JM4 1722 aa19.2■□□□□ 0.66
HMGB2-201ENST00000296503 TROQ12816 1431 aaPredicted RBP19.18■□□□□ 0.66
HMGB2-201ENST00000296503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.18■□□□□ 0.666e-13■■■□□ 15.1
HMGB2-201ENST00000296503 COL17A1Q9UMD9 1497 aaPredicted RBP19.17■□□□□ 0.66
HMGB2-201ENST00000296503 PHLDB1Q86UU1 1377 aa19.14■□□□□ 0.65
HMGB2-201ENST00000296503 TTC37Q6PGP7 1564 aa19.12■□□□□ 0.65
HMGB2-201ENST00000296503 NEO1Q92859 1461 aa19.11■□□□□ 0.65
HMGB2-201ENST00000296503 KIF14Q15058 1648 aa19.11■□□□□ 0.65
HMGB2-201ENST00000296503 PLCH2O75038 1416 aa19.1■□□□□ 0.65
HMGB2-201ENST00000296503 EFCAB2Q5VUJ9 269 aa19.09■□□□□ 0.65
HMGB2-201ENST00000296503 VPS8Q8N3P4 1428 aa19.09■□□□□ 0.65
HMGB2-201ENST00000296503 MTUS2Q5JR59 1369 aa19.09■□□□□ 0.65
HMGB2-201ENST00000296503 FANCAO15360 1455 aa19.09■□□□□ 0.65
HMGB2-201ENST00000296503 ARAP3Q8WWN8 1544 aa19.09■□□□□ 0.65
HMGB2-201ENST00000296503 RAPGEF3O95398 923 aa19.08■□□□□ 0.65
HMGB2-201ENST00000296503 AKNAQ7Z591 1439 aa19.07■□□□□ 0.64
HMGB2-201ENST00000296503 MYO5CQ9NQX4 1742 aa19.03■□□□□ 0.64
HMGB2-201ENST00000296503 CFAP74Q9C0B2 1584 aa19.02■□□□□ 0.64
HMGB2-201ENST00000296503 APLP2Q06481 763 aa19.02■□□□□ 0.64
HMGB2-201ENST00000296503 ARHGAP5Q13017 1502 aa19.01■□□□□ 0.63
HMGB2-201ENST00000296503 DENND4BO75064 1496 aaPredicted RBP19.01■□□□□ 0.63
HMGB2-201ENST00000296503 SCAPERQ9BY12 1400 aa18.99■□□□□ 0.63
HMGB2-201ENST00000296503 ZNF777Q9ULD5 760 aaPredicted RBP18.99■□□□□ 0.63
HMGB2-201ENST00000296503 ADGRL1O94910 1474 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms