RNA–Protein interactions for RNA: ENST00000296145.5

TDGF1-201, Transcript of teratocarcinoma-derived growth factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TDGF1, Length 2,513 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDGF1-201ENST00000296145 SOGA1O94964 1423 aa14.14□□□□□ -0.15
TDGF1-201ENST00000296145 MYCNP04198 464 aaPredicted RBP14.13□□□□□ -0.15
TDGF1-201ENST00000296145 WRNQ14191 1432 aaPredicted RBP eCLIP14.1□□□□□ -0.15
TDGF1-201ENST00000296145 EEA1Q15075 1411 aa14.1□□□□□ -0.15
TDGF1-201ENST00000296145 TNIKQ9UKE5 1360 aa14.07□□□□□ -0.16
TDGF1-201ENST00000296145 CEP162Q5TB80 1403 aa14.07□□□□□ -0.16
TDGF1-201ENST00000296145 RUSC2Q8N2Y8 1516 aa14.06□□□□□ -0.16
TDGF1-201ENST00000296145 FBXO3Q9UK99 471 aa14.05□□□□□ -0.16
TDGF1-201ENST00000296145 TRHP20396 242 aaPredicted RBP14.04□□□□□ -0.16
TDGF1-201ENST00000296145 SPRYD3Q8NCJ5 442 aa14.03□□□□□ -0.16
TDGF1-201ENST00000296145 ATAD2BQ9ULI0 1458 aa14.02□□□□□ -0.17
TDGF1-201ENST00000296145 SCAF1Q9H7N4 1312 aaKnown RBP13.98□□□□□ -0.17
TDGF1-201ENST00000296145 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.98□□□□□ -0.17
TDGF1-201ENST00000296145 RNF216Q9NWF9 866 aaPredicted RBP13.98□□□□□ -0.17
TDGF1-201ENST00000296145 GOLGA3Q08378 1498 aa13.98□□□□□ -0.17
TDGF1-201ENST00000296145 SYNJ1O43426 1573 aa13.97□□□□□ -0.17
TDGF1-201ENST00000296145 BCL11AQ9H165 835 aa13.97□□□□□ -0.17
TDGF1-201ENST00000296145 BAZ1BQ9UIG0 1483 aaKnown RBP13.96□□□□□ -0.17
TDGF1-201ENST00000296145 RGL2O15211 777 aa13.95□□□□□ -0.18
TDGF1-201ENST00000296145 CCER1Q8TC90 406 aaPredicted RBP13.94□□□□□ -0.18
TDGF1-201ENST00000296145 DNAJC5Q9H3Z4 198 aa13.92□□□□□ -0.18
TDGF1-201ENST00000296145 ECM2O94769 699 aaPredicted RBP13.91□□□□□ -0.18
TDGF1-201ENST00000296145 CEP164Q9UPV0 1460 aa13.91□□□□□ -0.18
TDGF1-201ENST00000296145 KIF21BO75037 1637 aa13.9□□□□□ -0.18
TDGF1-201ENST00000296145 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
TDGF1-201ENST00000296145 CLIP1P30622 1438 aa13.81□□□□□ -0.2
TDGF1-201ENST00000296145 SPDYE4A6NLX3 237 aa13.81□□□□□ -0.2
TDGF1-201ENST00000296145 BRPF1P55201 1214 aaPredicted RBP13.8□□□□□ -0.2
TDGF1-201ENST00000296145 RAPGEF2Q9Y4G8 1499 aa13.79□□□□□ -0.2
TDGF1-201ENST00000296145 EIF5BO60841 1220 aaKnown RBP13.78□□□□□ -0.2
TDGF1-201ENST00000296145 BIVM-ERCC5R4GMW8 1640 aa13.77□□□□□ -0.2
TDGF1-201ENST00000296145 VPS8Q8N3P4 1428 aa13.77□□□□□ -0.21
TDGF1-201ENST00000296145 CHGAP10645 457 aaKnown RBP13.77□□□□□ -0.21
TDGF1-201ENST00000296145 NCAPD3P42695 1498 aa13.76□□□□□ -0.21
TDGF1-201ENST00000296145 ARID3AQ99856 593 aa13.76□□□□□ -0.21
TDGF1-201ENST00000296145 HMGXB3Q12766 1538 aa13.75□□□□□ -0.21
TDGF1-201ENST00000296145 DIEXFQ68CQ4 756 aaKnown RBP13.69□□□□□ -0.22
TDGF1-201ENST00000296145 PROM2Q8N271 834 aa13.69□□□□□ -0.22
TDGF1-201ENST00000296145 PRXQ9BXM0 1461 aa13.69□□□□□ -0.22
TDGF1-201ENST00000296145 ERICH3Q5RHP9 1530 aa13.68□□□□□ -0.22
TDGF1-201ENST00000296145 CUX1P39880 1505 aa13.66□□□□□ -0.22
TDGF1-201ENST00000296145 HNRNPUL2Q1KMD3 747 aaKnown RBP13.65□□□□□ -0.22
TDGF1-201ENST00000296145 CFTRP13569 1480 aa13.64□□□□□ -0.23
TDGF1-201ENST00000296145 ZNF316A6NFI3 1004 aaPredicted RBP13.6□□□□□ -0.23
TDGF1-201ENST00000296145 KIF27Q86VH2 1401 aa13.6□□□□□ -0.23
TDGF1-201ENST00000296145 ARAP1Q96P48 1450 aa13.6□□□□□ -0.23
TDGF1-201ENST00000296145 C1orf115Q9H7X2 142 aa13.58□□□□□ -0.23
TDGF1-201ENST00000296145 ACIN1Q9UKV3 1341 aaKnown RBP13.58□□□□□ -0.24
TDGF1-201ENST00000296145 NEUROD1Q13562 356 aa13.56□□□□□ -0.24
TDGF1-201ENST00000296145 PRDM2Q13029 1718 aa13.55□□□□□ -0.24
TDGF1-201ENST00000296145 MKRN4PQ13434 485 aaPredicted RBP13.55□□□□□ -0.24
TDGF1-201ENST00000296145 NEUROD2Q15784 382 aa13.53□□□□□ -0.24
TDGF1-201ENST00000296145 HOXD11P31277 338 aaPredicted RBP13.52□□□□□ -0.25
TDGF1-201ENST00000296145 KANK4Q5T7N3 995 aaPredicted RBP13.51□□□□□ -0.25
TDGF1-201ENST00000296145 NECTIN2Q92692 538 aa13.5□□□□□ -0.25
TDGF1-201ENST00000296145 CENPBP07199 599 aaPredicted RBP13.49□□□□□ -0.25
TDGF1-201ENST00000296145 SPOCK2Q92563 424 aa13.49□□□□□ -0.25
TDGF1-201ENST00000296145 ARHGAP35Q9NRY4 1499 aa13.49□□□□□ -0.25
TDGF1-201ENST00000296145 CADPSQ9ULU8 1353 aa13.48□□□□□ -0.25
TDGF1-201ENST00000296145 LMOD2Q6P5Q4 547 aa13.47□□□□□ -0.25
TDGF1-201ENST00000296145 IGF1RP08069 1367 aa13.47□□□□□ -0.25
TDGF1-201ENST00000296145 CLSPNQ9HAW4 1339 aa13.46□□□□□ -0.25
TDGF1-201ENST00000296145 RRBP1Q9P2E9 1410 aaKnown RBP13.46□□□□□ -0.25
TDGF1-201ENST00000296145 ARID3CA6NKF2 412 aa13.46□□□□□ -0.26
TDGF1-201ENST00000296145 NKX1-1Q15270 411 aaPredicted RBP13.46□□□□□ -0.26
TDGF1-201ENST00000296145 CUX2O14529 1486 aa13.45□□□□□ -0.26
TDGF1-201ENST00000296145 DHX57Q6P158 1386 aaKnown RBP13.44□□□□□ -0.26
TDGF1-201ENST00000296145 FGD5Q6ZNL6 1462 aa13.41□□□□□ -0.26
TDGF1-201ENST00000296145 IGSF3O75054 1194 aa13.41□□□□□ -0.26
TDGF1-201ENST00000296145 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.4□□□□□ -0.26
TDGF1-201ENST00000296145 MIER1Q8N108 512 aa13.4□□□□□ -0.26
TDGF1-201ENST00000296145 CARMIL1Q5VZK9 1371 aa13.4□□□□□ -0.26
TDGF1-201ENST00000296145 CCNB3Q8WWL7 1395 aa13.39□□□□□ -0.27
TDGF1-201ENST00000296145 PLEKHG5O94827 1062 aa13.38□□□□□ -0.27
TDGF1-201ENST00000296145 CC2D2AQ9P2K1 1620 aa13.38□□□□□ -0.27
TDGF1-201ENST00000296145 MAP3K1Q13233 1512 aa13.36□□□□□ -0.27
TDGF1-201ENST00000296145 ZMYND15Q9H091 742 aa13.36□□□□□ -0.27
TDGF1-201ENST00000296145 SLC24A3Q9HC58 644 aa13.36□□□□□ -0.27
TDGF1-201ENST00000296145 CCDC9Q9Y3X0 531 aaKnown RBP13.36□□□□□ -0.27
TDGF1-201ENST00000296145 ZNF219Q9P2Y4 722 aaPredicted RBP13.35□□□□□ -0.27
TDGF1-201ENST00000296145 TIAM1Q13009 1591 aa13.34□□□□□ -0.27
TDGF1-201ENST00000296145 FANCD2Q9BXW9 1451 aa13.33□□□□□ -0.27
TDGF1-201ENST00000296145 YTHDC1Q96MU7 727 aaKnown RBP13.31□□□□□ -0.28
TDGF1-201ENST00000296145 RSPH6AQ9H0K4 717 aa13.31□□□□□ -0.28
TDGF1-201ENST00000296145 GTPBP6O43824 516 aaPredicted RBP13.3□□□□□ -0.28
TDGF1-201ENST00000296145 LRRC9Q6ZRR7 1453 aa13.29□□□□□ -0.28
TDGF1-201ENST00000296145 DNMBPQ6XZF7 1577 aa13.29□□□□□ -0.28
TDGF1-201ENST00000296145 RNF25Q96BH1 459 aaPredicted RBP13.28□□□□□ -0.28
TDGF1-201ENST00000296145 FHAD1B1AJZ9 1412 aa13.28□□□□□ -0.28
TDGF1-201ENST00000296145 ABCA10Q8WWZ4 1543 aa13.28□□□□□ -0.28
TDGF1-201ENST00000296145 HS6ST3Q8IZP7 471 aa13.28□□□□□ -0.28
TDGF1-201ENST00000296145 ITGAEP38570 1179 aa13.27□□□□□ -0.29
TDGF1-201ENST00000296145 RAD54L2Q9Y4B4 1467 aa13.27□□□□□ -0.29
TDGF1-201ENST00000296145 TOPBP1Q92547 1522 aa13.26□□□□□ -0.29
TDGF1-201ENST00000296145 POLA1P09884 1462 aaPredicted RBP13.26□□□□□ -0.29
TDGF1-201ENST00000296145 CIZ1Q9ULV3 898 aaPredicted RBP13.26□□□□□ -0.29
TDGF1-201ENST00000296145 RAB3GAP2Q9H2M9 1393 aa13.26□□□□□ -0.29
TDGF1-201ENST00000296145 PHLDB1Q86UU1 1377 aa13.25□□□□□ -0.29
TDGF1-201ENST00000296145 KCNV2Q8TDN2 545 aa13.25□□□□□ -0.29
TDGF1-201ENST00000296145 CFAP43Q8NDM7 1665 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms