RNA–Protein interactions for RNA: ENST00000296127.7

ZDHHC3-201, Transcript of zinc finger DHHC-type containing 3, humanhuman

TSL 1 (best) BASIC

Gene ZDHHC3, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3-201ENST00000296127 KANK4Q5T7N3 995 aaPredicted RBP20.42■□□□□ 0.86
ZDHHC3-201ENST00000296127 HNRNPUQ00839 825 aaKnown RBP eCLIP20.41■□□□□ 0.86
ZDHHC3-201ENST00000296127 B4GALNT3Q6L9W6 998 aa20.41■□□□□ 0.86
ZDHHC3-201ENST00000296127 WDR97A6NE52 1622 aa20.4■□□□□ 0.86
ZDHHC3-201ENST00000296127 SIN3AQ96ST3 1273 aa20.38■□□□□ 0.85
ZDHHC3-201ENST00000296127 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
ZDHHC3-201ENST00000296127 PPP4R2Q9NY27 417 aa20.36■□□□□ 0.85
ZDHHC3-201ENST00000296127 RTL5Q5HYW3 569 aaPredicted RBP20.34■□□□□ 0.85
ZDHHC3-201ENST00000296127 KIF21BO75037 1637 aa20.34■□□□□ 0.85
ZDHHC3-201ENST00000296127 MAPKBP1O60336 1514 aa20.32■□□□□ 0.84
ZDHHC3-201ENST00000296127 RAPGEF2Q9Y4G8 1499 aa20.27■□□□□ 0.84
ZDHHC3-201ENST00000296127 RAB3GAP2Q9H2M9 1393 aa20.26■□□□□ 0.83
ZDHHC3-201ENST00000296127 SMARCA2P51531 1590 aa20.23■□□□□ 0.83
ZDHHC3-201ENST00000296127 CUX2O14529 1486 aa20.22■□□□□ 0.83
ZDHHC3-201ENST00000296127 RRBP1Q9P2E9 1410 aaKnown RBP20.22■□□□□ 0.83
ZDHHC3-201ENST00000296127 IPO9Q96P70 1041 aaKnown RBP20.2■□□□□ 0.82
ZDHHC3-201ENST00000296127 EIF5BO60841 1220 aaKnown RBP20.2■□□□□ 0.82
ZDHHC3-201ENST00000296127 TOP2AP11388 1531 aaKnown RBP20.19■□□□□ 0.82
ZDHHC3-201ENST00000296127 ZBTB47Q9UFB7 747 aaPredicted RBP20.19■□□□□ 0.82
ZDHHC3-201ENST00000296127 CCNB3Q8WWL7 1395 aa20.18■□□□□ 0.82
ZDHHC3-201ENST00000296127 ANP32AP39687 249 aaKnown RBP20.16■□□□□ 0.82
ZDHHC3-201ENST00000296127 BAZ1BQ9UIG0 1483 aaKnown RBP20.15■□□□□ 0.82
ZDHHC3-201ENST00000296127 WASHC2AQ641Q2 1341 aa20.11■□□□□ 0.81
ZDHHC3-201ENST00000296127 CCDC184Q52MB2 194 aa20.11■□□□□ 0.81
ZDHHC3-201ENST00000296127 LAS1LQ9Y4W2 734 aaKnown RBP20.11■□□□□ 0.81
ZDHHC3-201ENST00000296127 BRPF3Q9ULD4 1205 aa20.11■□□□□ 0.81
ZDHHC3-201ENST00000296127 ARAP1Q96P48 1450 aa20.09■□□□□ 0.81
ZDHHC3-201ENST00000296127 NEFMP07197 916 aa20.07■□□□□ 0.8
ZDHHC3-201ENST00000296127 SYNJ1O43426 1573 aa20.06■□□□□ 0.8
ZDHHC3-201ENST00000296127 NPM2Q86SE8 214 aaKnown RBP20.04■□□□□ 0.8
ZDHHC3-201ENST00000296127 SETD5Q9C0A6 1442 aa20.02■□□□□ 0.8
ZDHHC3-201ENST00000296127 FAM9BQ8IZU0 186 aa20.02■□□□□ 0.79
ZDHHC3-201ENST00000296127 C11orf95C9JLR9 678 aaPredicted RBP19.98■□□□□ 0.79
ZDHHC3-201ENST00000296127 WASHC2CQ9Y4E1 1318 aa19.98■□□□□ 0.79
ZDHHC3-201ENST00000296127 TIMELESSQ9UNS1 1208 aa19.97■□□□□ 0.79
ZDHHC3-201ENST00000296127 PKNOX2Q96KN3 472 aa19.96■□□□□ 0.79
ZDHHC3-201ENST00000296127 FAM50AQ14320 339 aaKnown RBP19.92■□□□□ 0.78
ZDHHC3-201ENST00000296127 AKNAQ7Z591 1439 aa19.91■□□□□ 0.78
ZDHHC3-201ENST00000296127 SENP3-EIF4A1A0A087X0R7 540 aa19.89■□□□□ 0.77
ZDHHC3-201ENST00000296127 NCAPD3P42695 1498 aa19.87■□□□□ 0.77
ZDHHC3-201ENST00000296127 SMARCA4P51532 1647 aa19.87■□□□□ 0.77
ZDHHC3-201ENST00000296127 TONSLQ96HA7 1378 aa19.87■□□□□ 0.77
ZDHHC3-201ENST00000296127 ZBED9Q6R2W3 1325 aa19.86■□□□□ 0.77
ZDHHC3-201ENST00000296127 MRS2Q9HD23 443 aa19.86■□□□□ 0.77
ZDHHC3-201ENST00000296127 USP35Q9P2H5 1018 aa19.86■□□□□ 0.77
ZDHHC3-201ENST00000296127 GSE1Q14687 1217 aa19.81■□□□□ 0.76
ZDHHC3-201ENST00000296127 HMGXB3Q12766 1538 aa19.81■□□□□ 0.76
ZDHHC3-201ENST00000296127 FRAT1Q92837 279 aaPredicted RBP19.78■□□□□ 0.76
ZDHHC3-201ENST00000296127 PHLDB1Q86UU1 1377 aa19.78■□□□□ 0.76
ZDHHC3-201ENST00000296127 HSPA5P11021 654 aaKnown RBP19.78■□□□□ 0.76
ZDHHC3-201ENST00000296127 PRKRIP1Q9H875 184 aaPredicted RBP19.76■□□□□ 0.75
ZDHHC3-201ENST00000296127 PPM1GO15355 546 aaPredicted RBP19.76■□□□□ 0.75
ZDHHC3-201ENST00000296127 CNGB1Q14028 1251 aaPredicted RBP19.75■□□□□ 0.75
ZDHHC3-201ENST00000296127 PDE4AP27815 886 aa19.73■□□□□ 0.75
ZDHHC3-201ENST00000296127 PEG3Q9GZU2 1588 aa19.73■□□□□ 0.75
ZDHHC3-201ENST00000296127 PRXQ9BXM0 1461 aa19.72■□□□□ 0.75
ZDHHC3-201ENST00000296127 ARHGAP35Q9NRY4 1499 aa19.72■□□□□ 0.75
ZDHHC3-201ENST00000296127 ATAD2BQ9ULI0 1458 aa19.71■□□□□ 0.75
ZDHHC3-201ENST00000296127 RSPH6AQ9H0K4 717 aa19.71■□□□□ 0.75
ZDHHC3-201ENST00000296127 DNAJC5Q9H3Z4 198 aa19.71■□□□□ 0.75
ZDHHC3-201ENST00000296127 NFKBIBQ15653 356 aa19.7■□□□□ 0.74
ZDHHC3-201ENST00000296127 SLC4A3P48751 1232 aa19.7■□□□□ 0.74
ZDHHC3-201ENST00000296127 FHAD1B1AJZ9 1412 aa19.69■□□□□ 0.74
ZDHHC3-201ENST00000296127 NUDCQ9Y266 331 aa19.68■□□□□ 0.74
ZDHHC3-201ENST00000296127 SMG6Q86US8 1419 aaKnown RBP19.68■□□□□ 0.74
ZDHHC3-201ENST00000296127 CNTLNQ9NXG0 1405 aa19.68■□□□□ 0.74
ZDHHC3-201ENST00000296127 ERICH3Q5RHP9 1530 aa19.68■□□□□ 0.74
ZDHHC3-201ENST00000296127 RNF123Q5XPI4 1314 aa19.67■□□□□ 0.74
ZDHHC3-201ENST00000296127 DCAF11Q8TEB1 546 aa19.66■□□□□ 0.74
ZDHHC3-201ENST00000296127 BACH2Q9BYV9 841 aa19.66■□□□□ 0.74
ZDHHC3-201ENST00000296127 SKAP1Q86WV1 359 aa19.65■□□□□ 0.74
ZDHHC3-201ENST00000296127 VSIG10Q8N0Z9 540 aa19.65■□□□□ 0.74
ZDHHC3-201ENST00000296127 ZMYND15Q9H091 742 aa19.64■□□□□ 0.73
ZDHHC3-201ENST00000296127 TIAM1Q13009 1591 aa19.63■□□□□ 0.73
ZDHHC3-201ENST00000296127 TCERG1O14776 1098 aaKnown RBP19.61■□□□□ 0.73
ZDHHC3-201ENST00000296127 EXOC6Q8TAG9 804 aa19.61■□□□□ 0.73
ZDHHC3-201ENST00000296127 KDM5BQ9UGL1 1544 aa19.61■□□□□ 0.73
ZDHHC3-201ENST00000296127 FAM43AQ8N2R8 423 aa19.6■□□□□ 0.73
ZDHHC3-201ENST00000296127 NCOA2Q15596 1464 aa19.6■□□□□ 0.73
ZDHHC3-201ENST00000296127 LRRC9Q6ZRR7 1453 aa19.6■□□□□ 0.73
ZDHHC3-201ENST00000296127 EIF4G2P78344 907 aaKnown RBP eCLIP19.59■□□□□ 0.732e-6■■□□□ 12.5
ZDHHC3-201ENST00000296127 ATP1B4Q9UN42 357 aaPredicted RBP19.59■□□□□ 0.73
ZDHHC3-201ENST00000296127 PLEKHG5O94827 1062 aa19.55■□□□□ 0.72
ZDHHC3-201ENST00000296127 CCDC7Q96M83 1385 aa19.54■□□□□ 0.72
ZDHHC3-201ENST00000296127 FRAT2O75474 233 aaPredicted RBP19.53■□□□□ 0.72
ZDHHC3-201ENST00000296127 RRAGDQ9NQL2 400 aaPredicted RBP19.52■□□□□ 0.72
ZDHHC3-201ENST00000296127 TOP2BQ02880 1626 aa19.52■□□□□ 0.72
ZDHHC3-201ENST00000296127 CCDC18Q5T9S5 1454 aa19.52■□□□□ 0.71
ZDHHC3-201ENST00000296127 GLIPR1L2Q4G1C9 344 aa19.51■□□□□ 0.71
ZDHHC3-201ENST00000296127 AQRO60306 1485 aaKnown RBP eCLIP19.51■□□□□ 0.71
ZDHHC3-201ENST00000296127 LAMC3Q9Y6N6 1575 aa19.5■□□□□ 0.71
ZDHHC3-201ENST00000296127 ERCC6Q03468 1493 aa19.49■□□□□ 0.71
ZDHHC3-201ENST00000296127 THOC2Q8NI27 1593 aaKnown RBP19.48■□□□□ 0.71
ZDHHC3-201ENST00000296127 P3H3Q8IVL6 736 aa19.48■□□□□ 0.71
ZDHHC3-201ENST00000296127 DDRGK1Q96HY6 314 aa19.48■□□□□ 0.71
ZDHHC3-201ENST00000296127 MS4A1P11836 297 aa19.47■□□□□ 0.71
ZDHHC3-201ENST00000296127 NCOA1Q15788 1441 aa19.46■□□□□ 0.71
ZDHHC3-201ENST00000296127 UACAQ9BZF9 1416 aa19.46■□□□□ 0.71
ZDHHC3-201ENST00000296127 RRP1P56182 461 aaKnown RBP19.46■□□□□ 0.71
ZDHHC3-201ENST00000296127 DAXXQ9UER7 740 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms