RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 CCNB3Q8WWL7 1395 aa15.94■□□□□ 0.14
TGFA-201ENST00000295400 KCNH8Q96L42 1107 aa15.93■□□□□ 0.14
TGFA-201ENST00000295400 RAPGEF2Q9Y4G8 1499 aa15.9■□□□□ 0.14
TGFA-201ENST00000295400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.88■□□□□ 0.13
TGFA-201ENST00000295400 EIF4G2P78344 907 aaKnown RBP eCLIP15.87■□□□□ 0.13
TGFA-201ENST00000295400 CUX2O14529 1486 aa15.85■□□□□ 0.13
TGFA-201ENST00000295400 CARMIL1Q5VZK9 1371 aa15.84■□□□□ 0.13
TGFA-201ENST00000295400 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
TGFA-201ENST00000295400 BCL11AQ9H165 835 aa15.84■□□□□ 0.13
TGFA-201ENST00000295400 TMC1Q8TDI8 760 aa15.83■□□□□ 0.13
TGFA-201ENST00000295400 FOXD1Q16676 465 aa15.83■□□□□ 0.12
TGFA-201ENST00000295400 NBR1Q14596 966 aa15.81■□□□□ 0.12
TGFA-201ENST00000295400 RAB3GAP2Q9H2M9 1393 aa15.81■□□□□ 0.12
TGFA-201ENST00000295400 CCDC136Q96JN2 1154 aa15.79■□□□□ 0.12
TGFA-201ENST00000295400 RGL3Q3MIN7 710 aa15.77■□□□□ 0.12
TGFA-201ENST00000295400 SENP3Q9H4L4 574 aaPredicted RBP15.75■□□□□ 0.11
TGFA-201ENST00000295400 ANP32AP39687 249 aaKnown RBP15.75■□□□□ 0.11
TGFA-201ENST00000295400 CHMP7Q8WUX9 453 aaPredicted RBP15.74■□□□□ 0.11
TGFA-201ENST00000295400 DHX57Q6P158 1386 aaKnown RBP15.74■□□□□ 0.11
TGFA-201ENST00000295400 SETD5Q9C0A6 1442 aa15.72■□□□□ 0.11
TGFA-201ENST00000295400 TSPY4P0CV99 314 aa15.72■□□□□ 0.11
TGFA-201ENST00000295400 TSPY10P0CW01 314 aa15.72■□□□□ 0.11
TGFA-201ENST00000295400 CHGAP10645 457 aaKnown RBP15.71■□□□□ 0.1
TGFA-201ENST00000295400 SMARCA4P51532 1647 aa15.71■□□□□ 0.1
TGFA-201ENST00000295400 B4GALNT3Q6L9W6 998 aa15.7■□□□□ 0.1
TGFA-201ENST00000295400 CANXP27824 592 aaKnown RBP15.69■□□□□ 0.1
TGFA-201ENST00000295400 TDRD9Q8NDG6 1382 aaKnown RBP15.68■□□□□ 0.1
TGFA-201ENST00000295400 CFDP1Q9UEE9 299 aaPredicted RBP15.68■□□□□ 0.1
TGFA-201ENST00000295400 ATAD2BQ9ULI0 1458 aa15.67■□□□□ 0.1
TGFA-201ENST00000295400 HSPA5P11021 654 aaKnown RBP15.67■□□□□ 0.1
TGFA-201ENST00000295400 ANP32EQ9BTT0 268 aa15.67■□□□□ 0.1
TGFA-201ENST00000295400 SMARCA2P51531 1590 aa15.66■□□□□ 0.1
TGFA-201ENST00000295400 PPP1R15AO75807 674 aaPredicted RBP15.66■□□□□ 0.1
TGFA-201ENST00000295400 TSHZ2Q9NRE2 1034 aa15.65■□□□□ 0.1
TGFA-201ENST00000295400 FHOD3Q2V2M9 1422 aa15.63■□□□□ 0.09
TGFA-201ENST00000295400 FHAD1B1AJZ9 1412 aa15.62■□□□□ 0.09
TGFA-201ENST00000295400 RBM19Q9Y4C8 960 aaKnown RBP15.61■□□□□ 0.09
TGFA-201ENST00000295400 CARD11Q9BXL7 1154 aa15.61■□□□□ 0.09
TGFA-201ENST00000295400 PLEKHD1A6NEE1 506 aa15.59■□□□□ 0.09
TGFA-201ENST00000295400 ZBTB47Q9UFB7 747 aaPredicted RBP15.58■□□□□ 0.08
TGFA-201ENST00000295400 EIF4G1Q04637 1599 aaKnown RBP15.57■□□□□ 0.08
TGFA-201ENST00000295400 ARHGAP35Q9NRY4 1499 aa15.56■□□□□ 0.08
TGFA-201ENST00000295400 L3MBTL2Q969R5 705 aa15.54■□□□□ 0.08
TGFA-201ENST00000295400 CCER2I3L3R5 266 aa15.54■□□□□ 0.08
TGFA-201ENST00000295400 MPHOSPH9Q99550 1183 aa15.53■□□□□ 0.08
TGFA-201ENST00000295400 DCAF11Q8TEB1 546 aa15.52■□□□□ 0.08
TGFA-201ENST00000295400 TIMELESSQ9UNS1 1208 aa15.52■□□□□ 0.08
TGFA-201ENST00000295400 PPP4R2Q9NY27 417 aa15.52■□□□□ 0.07
TGFA-201ENST00000295400 CC2D1BQ5T0F9 858 aaKnown RBP15.51■□□□□ 0.07
TGFA-201ENST00000295400 WDR43Q15061 677 aaKnown RBP eCLIP15.51■□□□□ 0.07
TGFA-201ENST00000295400 KIF21BO75037 1637 aa15.49■□□□□ 0.07
TGFA-201ENST00000295400 PKD2Q13563 968 aa15.48■□□□□ 0.07
TGFA-201ENST00000295400 CADPSQ9ULU8 1353 aa15.48■□□□□ 0.07
TGFA-201ENST00000295400 ARXQ96QS3 562 aa15.48■□□□□ 0.07
TGFA-201ENST00000295400 IGF1RP08069 1367 aa15.47■□□□□ 0.07
TGFA-201ENST00000295400 PHLDB1Q86UU1 1377 aa15.45■□□□□ 0.06
TGFA-201ENST00000295400 SYNJ1O43426 1573 aa15.45■□□□□ 0.06
TGFA-201ENST00000295400 SLC24A1O60721 1099 aa15.45■□□□□ 0.06
TGFA-201ENST00000295400 ARAP1Q96P48 1450 aa15.44■□□□□ 0.06
TGFA-201ENST00000295400 NEUROD2Q15784 382 aa15.44■□□□□ 0.06
TGFA-201ENST00000295400 LAS1LQ9Y4W2 734 aaKnown RBP15.42■□□□□ 0.06
TGFA-201ENST00000295400 PLPPR3Q6T4P5 718 aa15.41■□□□□ 0.06
TGFA-201ENST00000295400 TNNT2P45379 298 aaPredicted RBP15.41■□□□□ 0.06
TGFA-201ENST00000295400 FMN1Q68DA7 1419 aa15.37■□□□□ 0.05
TGFA-201ENST00000295400 RAD54L2Q9Y4B4 1467 aa15.37■□□□□ 0.05
TGFA-201ENST00000295400 RGS3P49796 1198 aa15.36■□□□□ 0.05
TGFA-201ENST00000295400 KNSTRNQ9Y448 316 aa15.36■□□□□ 0.05
TGFA-201ENST00000295400 EIF5BO60841 1220 aaKnown RBP15.35■□□□□ 0.05
TGFA-201ENST00000295400 ZNF644Q9H582 1327 aaPredicted RBP15.34■□□□□ 0.05
TGFA-201ENST00000295400 STAG3Q9UJ98 1225 aa15.34■□□□□ 0.05
TGFA-201ENST00000295400 NEFMP07197 916 aa15.33■□□□□ 0.05
TGFA-201ENST00000295400 RTN4Q9NQC3 1192 aaKnown RBP15.33■□□□□ 0.04
TGFA-201ENST00000295400 NOP58Q9Y2X3 529 aaKnown RBP15.33■□□□□ 0.04
TGFA-201ENST00000295400 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.32■□□□□ 0.04
TGFA-201ENST00000295400 HNRNPMP52272 730 aaKnown RBP eCLIP15.32■□□□□ 0.04
TGFA-201ENST00000295400 NUP155O75694 1391 aa15.32■□□□□ 0.04
TGFA-201ENST00000295400 FGD5Q6ZNL6 1462 aa15.32■□□□□ 0.04
TGFA-201ENST00000295400 PRKRIP1Q9H875 184 aaPredicted RBP15.3■□□□□ 0.04
TGFA-201ENST00000295400 FANCD2Q9BXW9 1451 aa15.29■□□□□ 0.04
TGFA-201ENST00000295400 NPM1P06748 294 aaKnown RBP eCLIP15.29■□□□□ 0.04
TGFA-201ENST00000295400 CCDC18Q5T9S5 1454 aa15.28■□□□□ 0.04
TGFA-201ENST00000295400 FRAT1Q92837 279 aaPredicted RBP15.28■□□□□ 0.04
TGFA-201ENST00000295400 ST20-MTHFSA0A0A6YYL1 179 aa15.27■□□□□ 0.04
TGFA-201ENST00000295400 UPF2Q9HAU5 1272 aaKnown RBP15.25■□□□□ 0.03
TGFA-201ENST00000295400 LRRC9Q6ZRR7 1453 aa15.25■□□□□ 0.03
TGFA-201ENST00000295400 ERCC6Q03468 1493 aa15.24■□□□□ 0.03
TGFA-201ENST00000295400 PRXQ9BXM0 1461 aa15.24■□□□□ 0.03
TGFA-201ENST00000295400 PPM1GO15355 546 aaPredicted RBP15.24■□□□□ 0.03
TGFA-201ENST00000295400 HSP90AA1P07900 732 aaKnown RBP15.24■□□□□ 0.03
TGFA-201ENST00000295400 CCDC184Q52MB2 194 aa15.24■□□□□ 0.03
TGFA-201ENST00000295400 WASHC2AQ641Q2 1341 aa15.23■□□□□ 0.03
TGFA-201ENST00000295400 RRBP1Q9P2E9 1410 aaKnown RBP15.22■□□□□ 0.03
TGFA-201ENST00000295400 DEKP35659 375 aaKnown RBP15.22■□□□□ 0.03
TGFA-201ENST00000295400 SAFB2Q14151 953 aaKnown RBP eCLIP15.22■□□□□ 0.03
TGFA-201ENST00000295400 RCAN3Q9UKA8 241 aa15.22■□□□□ 0.03
TGFA-201ENST00000295400 TMF1P82094 1093 aa15.21■□□□□ 0.03
TGFA-201ENST00000295400 FGD6Q6ZV73 1430 aa15.21■□□□□ 0.03
TGFA-201ENST00000295400 PDS5BQ9NTI5 1447 aa15.21■□□□□ 0.03
TGFA-201ENST00000295400 PLIN1O60240 522 aa15.21■□□□□ 0.02
TGFA-201ENST00000295400 NUDCQ9Y266 331 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms