RNA–Protein interactions for RNA: ENST00000295050.11

SPRTN-202, Transcript of SprT-like N-terminal domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRTN, Length 3,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRTN-202ENST00000295050 SYNJ1O43426 1573 aa16.83■□□□□ 0.28
SPRTN-202ENST00000295050 NOP58Q9Y2X3 529 aaKnown RBP16.79■□□□□ 0.28
SPRTN-202ENST00000295050 MAPKBP1O60336 1514 aa16.78■□□□□ 0.28
SPRTN-202ENST00000295050 B4GALNT3Q6L9W6 998 aa16.77■□□□□ 0.27
SPRTN-202ENST00000295050 PPP4R2Q9NY27 417 aa16.77■□□□□ 0.27
SPRTN-202ENST00000295050 RTL5Q5HYW3 569 aaPredicted RBP16.76■□□□□ 0.27
SPRTN-202ENST00000295050 CUX2O14529 1486 aa16.76■□□□□ 0.27
SPRTN-202ENST00000295050 ARAP1Q96P48 1450 aa16.76■□□□□ 0.27
SPRTN-202ENST00000295050 FAM50AQ14320 339 aaKnown RBP16.76■□□□□ 0.27
SPRTN-202ENST00000295050 SALL2Q9Y467 1007 aaPredicted RBP16.72■□□□□ 0.27
SPRTN-202ENST00000295050 SETD5Q9C0A6 1442 aa16.71■□□□□ 0.27
SPRTN-202ENST00000295050 PAK3O75914 559 aaPredicted RBP16.71■□□□□ 0.27
SPRTN-202ENST00000295050 RTN4Q9NQC3 1192 aaKnown RBP16.7■□□□□ 0.26
SPRTN-202ENST00000295050 CCDC136Q96JN2 1154 aa16.69■□□□□ 0.26
SPRTN-202ENST00000295050 ERICH6BQ5W0A0 696 aa16.66■□□□□ 0.26
SPRTN-202ENST00000295050 TONSLQ96HA7 1378 aa16.65■□□□□ 0.26
SPRTN-202ENST00000295050 ANP32AP39687 249 aaKnown RBP16.65■□□□□ 0.26
SPRTN-202ENST00000295050 TIMELESSQ9UNS1 1208 aa16.64■□□□□ 0.25
SPRTN-202ENST00000295050 FAM9BQ8IZU0 186 aa16.62■□□□□ 0.25
SPRTN-202ENST00000295050 IL27Q8NEV9 243 aa16.62■□□□□ 0.25
SPRTN-202ENST00000295050 ATP1B4Q9UN42 357 aaPredicted RBP16.62■□□□□ 0.25
SPRTN-202ENST00000295050 ZBTB47Q9UFB7 747 aaPredicted RBP16.61■□□□□ 0.25
SPRTN-202ENST00000295050 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.6■□□□□ 0.25
SPRTN-202ENST00000295050 ERICH3Q5RHP9 1530 aa16.55■□□□□ 0.24
SPRTN-202ENST00000295050 IPO9Q96P70 1041 aaKnown RBP16.55■□□□□ 0.24
SPRTN-202ENST00000295050 PRXQ9BXM0 1461 aa16.55■□□□□ 0.24
SPRTN-202ENST00000295050 PABPN1Q86U42 306 aaKnown RBP eCLIP16.54■□□□□ 0.24
SPRTN-202ENST00000295050 CCDC184Q52MB2 194 aa16.51■□□□□ 0.23
SPRTN-202ENST00000295050 NPM2Q86SE8 214 aaKnown RBP16.51■□□□□ 0.23
SPRTN-202ENST00000295050 MRS2Q9HD23 443 aa16.51■□□□□ 0.23
SPRTN-202ENST00000295050 ARHGAP35Q9NRY4 1499 aa16.51■□□□□ 0.23
SPRTN-202ENST00000295050 PHLDB1Q86UU1 1377 aa16.5■□□□□ 0.23
SPRTN-202ENST00000295050 CNGB1Q14028 1251 aaPredicted RBP16.47■□□□□ 0.23
SPRTN-202ENST00000295050 LAS1LQ9Y4W2 734 aaKnown RBP16.46■□□□□ 0.23
SPRTN-202ENST00000295050 TOP2BQ02880 1626 aa16.45■□□□□ 0.22
SPRTN-202ENST00000295050 WASHC2AQ641Q2 1341 aa16.44■□□□□ 0.22
SPRTN-202ENST00000295050 NEFMP07197 916 aa16.44■□□□□ 0.22
SPRTN-202ENST00000295050 HSPA5P11021 654 aaKnown RBP16.44■□□□□ 0.22
SPRTN-202ENST00000295050 P3H3Q8IVL6 736 aa16.44■□□□□ 0.22
SPRTN-202ENST00000295050 ZBED9Q6R2W3 1325 aa16.43■□□□□ 0.22
SPRTN-202ENST00000295050 EIF5BO60841 1220 aaKnown RBP16.42■□□□□ 0.22
SPRTN-202ENST00000295050 TIAM1Q13009 1591 aa16.42■□□□□ 0.22
SPRTN-202ENST00000295050 KIF27Q86VH2 1401 aa16.42■□□□□ 0.22
SPRTN-202ENST00000295050 LRRC9Q6ZRR7 1453 aa16.41■□□□□ 0.22
SPRTN-202ENST00000295050 SENP3-EIF4A1A0A087X0R7 540 aa16.41■□□□□ 0.22
SPRTN-202ENST00000295050 EIF4G2P78344 907 aaKnown RBP eCLIP16.38■□□□□ 0.21
SPRTN-202ENST00000295050 PRKRIP1Q9H875 184 aaPredicted RBP16.38■□□□□ 0.21
SPRTN-202ENST00000295050 AKNAQ7Z591 1439 aa16.37■□□□□ 0.21
SPRTN-202ENST00000295050 FHAD1B1AJZ9 1412 aa16.37■□□□□ 0.21
SPRTN-202ENST00000295050 CNTLNQ9NXG0 1405 aa16.33■□□□□ 0.2
SPRTN-202ENST00000295050 CCDC18Q5T9S5 1454 aa16.32■□□□□ 0.2
SPRTN-202ENST00000295050 UBE2Q2Q8WVN8 375 aa16.32■□□□□ 0.2
SPRTN-202ENST00000295050 UNC13AQ9UPW8 1703 aa16.31■□□□□ 0.2
SPRTN-202ENST00000295050 POLR3GLQ9BT43 218 aa16.3■□□□□ 0.2
SPRTN-202ENST00000295050 BIVM-ERCC5R4GMW8 1640 aa16.3■□□□□ 0.2
SPRTN-202ENST00000295050 BRPF3Q9ULD4 1205 aa16.29■□□□□ 0.2
SPRTN-202ENST00000295050 NUDCQ9Y266 331 aa16.29■□□□□ 0.2
SPRTN-202ENST00000295050 ATAD2BQ9ULI0 1458 aa16.29■□□□□ 0.2
SPRTN-202ENST00000295050 MAP3K1Q13233 1512 aa16.28■□□□□ 0.2
SPRTN-202ENST00000295050 USP35Q9P2H5 1018 aa16.28■□□□□ 0.2
SPRTN-202ENST00000295050 PEG3Q9GZU2 1588 aa16.27■□□□□ 0.2
SPRTN-202ENST00000295050 UACAQ9BZF9 1416 aa16.27■□□□□ 0.19
SPRTN-202ENST00000295050 C11orf95C9JLR9 678 aaPredicted RBP16.26■□□□□ 0.19
SPRTN-202ENST00000295050 PPM1GO15355 546 aaPredicted RBP16.26■□□□□ 0.19
SPRTN-202ENST00000295050 SMG6Q86US8 1419 aaKnown RBP16.23■□□□□ 0.19
SPRTN-202ENST00000295050 CCDC7Q96M83 1385 aa16.23■□□□□ 0.19
SPRTN-202ENST00000295050 CUX1P39880 1505 aa16.21■□□□□ 0.19
SPRTN-202ENST00000295050 PDE4AP27815 886 aa16.21■□□□□ 0.19
SPRTN-202ENST00000295050 RRP7BPQ9NSQ0 103 aa16.2■□□□□ 0.18
SPRTN-202ENST00000295050 NCOA2Q15596 1464 aa16.2■□□□□ 0.18
SPRTN-202ENST00000295050 CHIC2Q9UKJ5 165 aa16.19■□□□□ 0.18
SPRTN-202ENST00000295050 GSE1Q14687 1217 aa16.19■□□□□ 0.18
SPRTN-202ENST00000295050 WASHC2CQ9Y4E1 1318 aa16.19■□□□□ 0.18
SPRTN-202ENST00000295050 TCERG1O14776 1098 aaKnown RBP16.18■□□□□ 0.18
SPRTN-202ENST00000295050 DAXXQ9UER7 740 aaPredicted RBP16.18■□□□□ 0.18
SPRTN-202ENST00000295050 PCF11O94913 1555 aaKnown RBP16.18■□□□□ 0.18
SPRTN-202ENST00000295050 FGD6Q6ZV73 1430 aa16.17■□□□□ 0.18
SPRTN-202ENST00000295050 L3MBTL2Q969R5 705 aa16.17■□□□□ 0.18
SPRTN-202ENST00000295050 HFM1A2PYH4 1435 aa16.17■□□□□ 0.18
SPRTN-202ENST00000295050 CARMIL1Q5VZK9 1371 aa16.17■□□□□ 0.18
SPRTN-202ENST00000295050 AQRO60306 1485 aaKnown RBP eCLIP16.16■□□□□ 0.18
SPRTN-202ENST00000295050 FHOD3Q2V2M9 1422 aa16.16■□□□□ 0.18
SPRTN-202ENST00000295050 MTUS2Q5JR59 1369 aa16.16■□□□□ 0.18
SPRTN-202ENST00000295050 EXOC6Q8TAG9 804 aa16.15■□□□□ 0.18
SPRTN-202ENST00000295050 IGF1RP08069 1367 aa16.15■□□□□ 0.18
SPRTN-202ENST00000295050 FMN1Q68DA7 1419 aa16.15■□□□□ 0.18
SPRTN-202ENST00000295050 FOXD1Q16676 465 aa16.14■□□□□ 0.17
SPRTN-202ENST00000295050 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.14■□□□□ 0.17
SPRTN-202ENST00000295050 KIF7Q2M1P5 1343 aa16.14■□□□□ 0.17
SPRTN-202ENST00000295050 PTPRKQ15262 1439 aa16.14■□□□□ 0.17
SPRTN-202ENST00000295050 NCOA1Q15788 1441 aa16.14■□□□□ 0.17
SPRTN-202ENST00000295050 KDM5BQ9UGL1 1544 aa16.14■□□□□ 0.17
SPRTN-202ENST00000295050 RNF123Q5XPI4 1314 aa16.13■□□□□ 0.17
SPRTN-202ENST00000295050 CFAP43Q8NDM7 1665 aa16.13■□□□□ 0.17
SPRTN-202ENST00000295050 PTPN23Q9H3S7 1636 aa16.13■□□□□ 0.17
SPRTN-202ENST00000295050 BACH2Q9BYV9 841 aa16.13■□□□□ 0.17
SPRTN-202ENST00000295050 TMC1Q8TDI8 760 aa16.13■□□□□ 0.17
SPRTN-202ENST00000295050 NAIPQ13075 1403 aa16.12■□□□□ 0.17
SPRTN-202ENST00000295050 NCAPD3P42695 1498 aa16.11■□□□□ 0.17
SPRTN-202ENST00000295050 SLC4A3P48751 1232 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms