RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 BIVM-ERCC5R4GMW8 1640 aa19.81■□□□□ 0.76
FUBP1-201ENST00000294623 SETD5Q9C0A6 1442 aa19.8■□□□□ 0.76
FUBP1-201ENST00000294623 DDX10Q13206 875 aaKnown RBP19.8■□□□□ 0.76
FUBP1-201ENST00000294623 ITGAEP38570 1179 aa19.76■□□□□ 0.75
FUBP1-201ENST00000294623 PPP4R2Q9NY27 417 aa19.76■□□□□ 0.75
FUBP1-201ENST00000294623 KANK4Q5T7N3 995 aaPredicted RBP19.72■□□□□ 0.75
FUBP1-201ENST00000294623 TRIM52Q96A61 297 aa19.68■□□□□ 0.74
FUBP1-201ENST00000294623 NOP58Q9Y2X3 529 aaKnown RBP19.68■□□□□ 0.74
FUBP1-201ENST00000294623 TIAM1Q13009 1591 aa19.67■□□□□ 0.74
FUBP1-201ENST00000294623 UNC13AQ9UPW8 1703 aa19.67■□□□□ 0.74
FUBP1-201ENST00000294623 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.63■□□□□ 0.73
FUBP1-201ENST00000294623 ARHGAP35Q9NRY4 1499 aa19.6■□□□□ 0.73
FUBP1-201ENST00000294623 FHAD1B1AJZ9 1412 aa19.59■□□□□ 0.73
FUBP1-201ENST00000294623 CFAP43Q8NDM7 1665 aa19.57■□□□□ 0.72
FUBP1-201ENST00000294623 RTL5Q5HYW3 569 aaPredicted RBP19.55■□□□□ 0.72
FUBP1-201ENST00000294623 HNRNPUQ00839 825 aaKnown RBP eCLIP19.54■□□□□ 0.72
FUBP1-201ENST00000294623 LRRC9Q6ZRR7 1453 aa19.53■□□□□ 0.72
FUBP1-201ENST00000294623 KIF27Q86VH2 1401 aa19.53■□□□□ 0.72
FUBP1-201ENST00000294623 TONSLQ96HA7 1378 aa19.48■□□□□ 0.71
FUBP1-201ENST00000294623 ANP32AP39687 249 aaKnown RBP19.48■□□□□ 0.71
FUBP1-201ENST00000294623 NCOA2Q15596 1464 aa19.47■□□□□ 0.71
FUBP1-201ENST00000294623 IPO9Q96P70 1041 aaKnown RBP19.46■□□□□ 0.71
FUBP1-201ENST00000294623 SIN3AQ96ST3 1273 aa19.46■□□□□ 0.71
FUBP1-201ENST00000294623 USP35Q9P2H5 1018 aa19.46■□□□□ 0.71
FUBP1-201ENST00000294623 ZBED9Q6R2W3 1325 aa19.45■□□□□ 0.7
FUBP1-201ENST00000294623 NCAPD3P42695 1498 aa19.44■□□□□ 0.7
FUBP1-201ENST00000294623 ANO8Q9HCE9 1232 aaPredicted RBP19.44■□□□□ 0.7
FUBP1-201ENST00000294623 ATAD2BQ9ULI0 1458 aa19.44■□□□□ 0.7
FUBP1-201ENST00000294623 WASHC2AQ641Q2 1341 aa19.41■□□□□ 0.7
FUBP1-201ENST00000294623 RANGAP1P46060 587 aaPredicted RBP19.41■□□□□ 0.7
FUBP1-201ENST00000294623 C11orf95C9JLR9 678 aaPredicted RBP19.39■□□□□ 0.69
FUBP1-201ENST00000294623 UBE2Q2Q8WVN8 375 aa19.39■□□□□ 0.69
FUBP1-201ENST00000294623 UACAQ9BZF9 1416 aa19.39■□□□□ 0.69
FUBP1-201ENST00000294623 PHLDB1Q86UU1 1377 aa19.39■□□□□ 0.69
FUBP1-201ENST00000294623 CNTLNQ9NXG0 1405 aa19.39■□□□□ 0.69
FUBP1-201ENST00000294623 ZBTB47Q9UFB7 747 aaPredicted RBP19.39■□□□□ 0.69
FUBP1-201ENST00000294623 NBR1Q14596 966 aa19.36■□□□□ 0.69
FUBP1-201ENST00000294623 IRX6P78412 446 aaPredicted RBP19.35■□□□□ 0.69
FUBP1-201ENST00000294623 PAK3O75914 559 aaPredicted RBP19.34■□□□□ 0.69
FUBP1-201ENST00000294623 SMG6Q86US8 1419 aaKnown RBP19.34■□□□□ 0.69
FUBP1-201ENST00000294623 BICRAQ9NZM4 1560 aa19.33■□□□□ 0.68
FUBP1-201ENST00000294623 KDM5BQ9UGL1 1544 aa19.32■□□□□ 0.68
FUBP1-201ENST00000294623 RNF123Q5XPI4 1314 aa19.32■□□□□ 0.68
FUBP1-201ENST00000294623 ABCA5Q8WWZ7 1642 aa19.32■□□□□ 0.68
FUBP1-201ENST00000294623 AQRO60306 1485 aaKnown RBP eCLIP19.31■□□□□ 0.685e-9■■■■■ 27.9
FUBP1-201ENST00000294623 CCDC18Q5T9S5 1454 aa19.31■□□□□ 0.68
FUBP1-201ENST00000294623 SALL2Q9Y467 1007 aaPredicted RBP19.31■□□□□ 0.68
FUBP1-201ENST00000294623 HFM1A2PYH4 1435 aa19.31■□□□□ 0.68
FUBP1-201ENST00000294623 CUX1P39880 1505 aa19.31■□□□□ 0.68
FUBP1-201ENST00000294623 B4GALNT3Q6L9W6 998 aa19.31■□□□□ 0.68
FUBP1-201ENST00000294623 POLR1AO95602 1720 aaPredicted RBP19.3■□□□□ 0.68
FUBP1-201ENST00000294623 WASHC2CQ9Y4E1 1318 aa19.29■□□□□ 0.68
FUBP1-201ENST00000294623 FYCO1Q9BQS8 1478 aa19.29■□□□□ 0.68
FUBP1-201ENST00000294623 PTPN23Q9H3S7 1636 aa19.28■□□□□ 0.68
FUBP1-201ENST00000294623 PPM1GO15355 546 aaPredicted RBP19.26■□□□□ 0.67
FUBP1-201ENST00000294623 CCDC136Q96JN2 1154 aa19.26■□□□□ 0.67
FUBP1-201ENST00000294623 PCF11O94913 1555 aaKnown RBP19.26■□□□□ 0.67
FUBP1-201ENST00000294623 FAM50AQ14320 339 aaKnown RBP19.25■□□□□ 0.67
FUBP1-201ENST00000294623 EFCAB5A4FU69 1503 aa19.24■□□□□ 0.67
FUBP1-201ENST00000294623 HIRIP3Q9BW71 556 aaPredicted RBP19.24■□□□□ 0.67
FUBP1-201ENST00000294623 NCOA1Q15788 1441 aa19.22■□□□□ 0.67
FUBP1-201ENST00000294623 HECW1Q76N89 1606 aa19.21■□□□□ 0.67
FUBP1-201ENST00000294623 PRKRIP1Q9H875 184 aaPredicted RBP19.2■□□□□ 0.66
FUBP1-201ENST00000294623 FGD6Q6ZV73 1430 aa19.2■□□□□ 0.66
FUBP1-201ENST00000294623 EIF4G2P78344 907 aaKnown RBP eCLIP19.19■□□□□ 0.66
FUBP1-201ENST00000294623 CASKIN1Q8WXD9 1431 aa19.18■□□□□ 0.66
FUBP1-201ENST00000294623 PRDM2Q13029 1718 aa19.18■□□□□ 0.66
FUBP1-201ENST00000294623 FMN1Q68DA7 1419 aa19.17■□□□□ 0.66
FUBP1-201ENST00000294623 IL27Q8NEV9 243 aa19.17■□□□□ 0.66
FUBP1-201ENST00000294623 NUDCQ9Y266 331 aa19.17■□□□□ 0.66
FUBP1-201ENST00000294623 TCERG1O14776 1098 aaKnown RBP19.16■□□□□ 0.66
FUBP1-201ENST00000294623 HSPA5P11021 654 aaKnown RBP19.16■□□□□ 0.66
FUBP1-201ENST00000294623 CCDC7Q96M83 1385 aa19.16■□□□□ 0.66
FUBP1-201ENST00000294623 HMGXB3Q12766 1538 aa19.15■□□□□ 0.66
FUBP1-201ENST00000294623 FGD5Q6ZNL6 1462 aa19.15■□□□□ 0.66
FUBP1-201ENST00000294623 MRS2Q9HD23 443 aa19.15■□□□□ 0.66
FUBP1-201ENST00000294623 MS4A1P11836 297 aa19.14■□□□□ 0.65
FUBP1-201ENST00000294623 AKNAQ7Z591 1439 aa19.13■□□□□ 0.65
FUBP1-201ENST00000294623 GCC2Q8IWJ2 1684 aa19.13■□□□□ 0.65
FUBP1-201ENST00000294623 NAIPQ13075 1403 aa19.12■□□□□ 0.65
FUBP1-201ENST00000294623 IGF1RP08069 1367 aa19.11■□□□□ 0.65
FUBP1-201ENST00000294623 DDRGK1Q96HY6 314 aa19.1■□□□□ 0.65
FUBP1-201ENST00000294623 NEFMP07197 916 aa19.08■□□□□ 0.65
FUBP1-201ENST00000294623 THOC2Q8NI27 1593 aaKnown RBP19.08■□□□□ 0.64
FUBP1-201ENST00000294623 CARMIL1Q5VZK9 1371 aa19.07■□□□□ 0.64
FUBP1-201ENST00000294623 CFTRP13569 1480 aa19.06■□□□□ 0.64
FUBP1-201ENST00000294623 FAM9BQ8IZU0 186 aa19.06■□□□□ 0.64
FUBP1-201ENST00000294623 RSPH6AQ9H0K4 717 aa19.04■□□□□ 0.64
FUBP1-201ENST00000294623 CCDC184Q52MB2 194 aa19.02■□□□□ 0.64
FUBP1-201ENST00000294623 GSE1Q14687 1217 aa19.01■□□□□ 0.63
FUBP1-201ENST00000294623 MYOM3Q5VTT5 1437 aa19.01■□□□□ 0.63
FUBP1-201ENST00000294623 SUPT6HQ7KZ85 1726 aaKnown RBP19■□□□□ 0.63
FUBP1-201ENST00000294623 MIA2Q96PC5 1412 aa19■□□□□ 0.63
FUBP1-201ENST00000294623 ARID4BQ4LE39 1312 aaPredicted RBP18.99■□□□□ 0.63
FUBP1-201ENST00000294623 EHBP1L1Q8N3D4 1523 aa18.98■□□□□ 0.63
FUBP1-201ENST00000294623 PTPRKQ15262 1439 aa18.98■□□□□ 0.63
FUBP1-201ENST00000294623 SPATA31E1Q6ZUB1 1445 aa18.98■□□□□ 0.63
FUBP1-201ENST00000294623 BACH2Q9BYV9 841 aa18.97■□□□□ 0.63
FUBP1-201ENST00000294623 TCOF1Q13428 1488 aaKnown RBP18.97■□□□□ 0.63
FUBP1-201ENST00000294623 CTTNBP2Q8WZ74 1663 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms