RNA–Protein interactions for RNA: ENST00000292823.6

PCYT1A-201, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCYT1A, Length 5,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-201ENST00000292823 CARMIL1Q5VZK9 1371 aa13.56□□□□□ -0.24
PCYT1A-201ENST00000292823 CCNB3Q8WWL7 1395 aa13.52□□□□□ -0.24
PCYT1A-201ENST00000292823 EIF4G1Q04637 1599 aaKnown RBP13.51□□□□□ -0.25
PCYT1A-201ENST00000292823 HNRNPUQ00839 825 aaKnown RBP eCLIP13.51□□□□□ -0.25
PCYT1A-201ENST00000292823 TIMELESSQ9UNS1 1208 aa13.51□□□□□ -0.25
PCYT1A-201ENST00000292823 ANP32AP39687 249 aaKnown RBP13.51□□□□□ -0.25
PCYT1A-201ENST00000292823 CARMIL2Q6F5E8 1435 aa13.51□□□□□ -0.25
PCYT1A-201ENST00000292823 STAG3Q9UJ98 1225 aa13.48□□□□□ -0.25
PCYT1A-201ENST00000292823 NCAPD3P42695 1498 aa13.47□□□□□ -0.25
PCYT1A-201ENST00000292823 NEFMP07197 916 aa13.46□□□□□ -0.26
PCYT1A-201ENST00000292823 EIF4G2P78344 907 aaKnown RBP eCLIP13.45□□□□□ -0.26
PCYT1A-201ENST00000292823 FANCD2Q9BXW9 1451 aa13.44□□□□□ -0.26
PCYT1A-201ENST00000292823 SETD5Q9C0A6 1442 aa13.42□□□□□ -0.26
PCYT1A-201ENST00000292823 CHIC2Q9UKJ5 165 aa13.41□□□□□ -0.26
PCYT1A-201ENST00000292823 RAPGEF2Q9Y4G8 1499 aa13.41□□□□□ -0.26
PCYT1A-201ENST00000292823 FMN1Q68DA7 1419 aa13.4□□□□□ -0.26
PCYT1A-201ENST00000292823 HMGXB3Q12766 1538 aa13.4□□□□□ -0.26
PCYT1A-201ENST00000292823 FAM9BQ8IZU0 186 aa13.39□□□□□ -0.27
PCYT1A-201ENST00000292823 ARHGAP35Q9NRY4 1499 aa13.39□□□□□ -0.27
PCYT1A-201ENST00000292823 CFDP1Q9UEE9 299 aaPredicted RBP13.38□□□□□ -0.27
PCYT1A-201ENST00000292823 MRS2Q9HD23 443 aa13.38□□□□□ -0.27
PCYT1A-201ENST00000292823 CHGAP10645 457 aaKnown RBP13.36□□□□□ -0.27
PCYT1A-201ENST00000292823 CCER2I3L3R5 266 aa13.36□□□□□ -0.27
PCYT1A-201ENST00000292823 CANXP27824 592 aaKnown RBP13.35□□□□□ -0.27
PCYT1A-201ENST00000292823 KCNH8Q96L42 1107 aa13.34□□□□□ -0.27
PCYT1A-201ENST00000292823 TMC1Q8TDI8 760 aa13.34□□□□□ -0.27
PCYT1A-201ENST00000292823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.34□□□□□ -0.275e-9■■■□□ 17.5
PCYT1A-201ENST00000292823 RRP7BPQ9NSQ0 103 aa13.33□□□□□ -0.28
PCYT1A-201ENST00000292823 KIF21BO75037 1637 aa13.31□□□□□ -0.28
PCYT1A-201ENST00000292823 CCDC136Q96JN2 1154 aa13.31□□□□□ -0.28
PCYT1A-201ENST00000292823 SUPT16HQ9Y5B9 1047 aaKnown RBP13.31□□□□□ -0.28
PCYT1A-201ENST00000292823 KANK1Q14678 1352 aa13.3□□□□□ -0.28
PCYT1A-201ENST00000292823 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.29□□□□□ -0.28
PCYT1A-201ENST00000292823 RAB3GAP2Q9H2M9 1393 aa13.28□□□□□ -0.28
PCYT1A-201ENST00000292823 KANK4Q5T7N3 995 aaPredicted RBP13.28□□□□□ -0.28
PCYT1A-201ENST00000292823 SIN3AQ96ST3 1273 aa13.27□□□□□ -0.29
PCYT1A-201ENST00000292823 TDRD9Q8NDG6 1382 aaKnown RBP13.27□□□□□ -0.29
PCYT1A-201ENST00000292823 CC2D2AQ9P2K1 1620 aa13.27□□□□□ -0.29
PCYT1A-201ENST00000292823 HIRIP3Q9BW71 556 aaPredicted RBP13.26□□□□□ -0.29
PCYT1A-201ENST00000292823 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
PCYT1A-201ENST00000292823 RUSC2Q8N2Y8 1516 aa13.26□□□□□ -0.29
PCYT1A-201ENST00000292823 ANP32EQ9BTT0 268 aa13.25□□□□□ -0.29
PCYT1A-201ENST00000292823 DHX57Q6P158 1386 aaKnown RBP13.23□□□□□ -0.29
PCYT1A-201ENST00000292823 FGD5Q6ZNL6 1462 aa13.22□□□□□ -0.29
PCYT1A-201ENST00000292823 NPM2Q86SE8 214 aaKnown RBP13.22□□□□□ -0.29
PCYT1A-201ENST00000292823 CDCA8Q53HL2 280 aa13.22□□□□□ -0.29
PCYT1A-201ENST00000292823 PPP4R2Q9NY27 417 aa13.22□□□□□ -0.29
PCYT1A-201ENST00000292823 CCDC18Q5T9S5 1454 aa13.22□□□□□ -0.29
PCYT1A-201ENST00000292823 WDR43Q15061 677 aaKnown RBP eCLIP13.21□□□□□ -0.29
PCYT1A-201ENST00000292823 MRC2Q9UBG0 1479 aa13.21□□□□□ -0.29
PCYT1A-201ENST00000292823 ERICH6BQ5W0A0 696 aa13.21□□□□□ -0.29
PCYT1A-201ENST00000292823 ERICH3Q5RHP9 1530 aa13.21□□□□□ -0.29
PCYT1A-201ENST00000292823 CFTRP13569 1480 aa13.2□□□□□ -0.3
PCYT1A-201ENST00000292823 GAPVD1Q14C86 1478 aa13.2□□□□□ -0.3
PCYT1A-201ENST00000292823 SLC24A1O60721 1099 aa13.2□□□□□ -0.3
PCYT1A-201ENST00000292823 PPP1R15AO75807 674 aaPredicted RBP13.2□□□□□ -0.3
PCYT1A-201ENST00000292823 UPF2Q9HAU5 1272 aaKnown RBP13.18□□□□□ -0.3
PCYT1A-201ENST00000292823 RSPH4AQ5TD94 716 aa13.17□□□□□ -0.3
PCYT1A-201ENST00000292823 KDM2AQ9Y2K7 1162 aa13.17□□□□□ -0.3
PCYT1A-201ENST00000292823 HDGFP51858 240 aaKnown RBP13.17□□□□□ -0.3
PCYT1A-201ENST00000292823 ARID4BQ4LE39 1312 aaPredicted RBP13.17□□□□□ -0.3
PCYT1A-201ENST00000292823 DDRGK1Q96HY6 314 aa13.16□□□□□ -0.3
PCYT1A-201ENST00000292823 IFT140Q96RY7 1462 aa13.16□□□□□ -0.3
PCYT1A-201ENST00000292823 IRX6P78412 446 aaPredicted RBP13.15□□□□□ -0.3
PCYT1A-201ENST00000292823 BICRAQ9NZM4 1560 aa13.14□□□□□ -0.31
PCYT1A-201ENST00000292823 LAMC3Q9Y6N6 1575 aa13.13□□□□□ -0.31
PCYT1A-201ENST00000292823 EFCAB2Q5VUJ9 269 aa13.13□□□□□ -0.31
PCYT1A-201ENST00000292823 CARD11Q9BXL7 1154 aa13.13□□□□□ -0.31
PCYT1A-201ENST00000292823 ANKRD30AQ9BXX3 1397 aa13.12□□□□□ -0.31
PCYT1A-201ENST00000292823 GRIN2BQ13224 1484 aa13.12□□□□□ -0.31
PCYT1A-201ENST00000292823 HSPA5P11021 654 aaKnown RBP13.1□□□□□ -0.31
PCYT1A-201ENST00000292823 PLPPR3Q6T4P5 718 aa13.1□□□□□ -0.31
PCYT1A-201ENST00000292823 TOP2BQ02880 1626 aa13.1□□□□□ -0.31
PCYT1A-201ENST00000292823 DNMBPQ6XZF7 1577 aa13.1□□□□□ -0.31
PCYT1A-201ENST00000292823 SYNJ1O43426 1573 aa13.09□□□□□ -0.31
PCYT1A-201ENST00000292823 FHOD3Q2V2M9 1422 aa13.09□□□□□ -0.31
PCYT1A-201ENST00000292823 PEG3Q9GZU2 1588 aa13.09□□□□□ -0.31
PCYT1A-201ENST00000292823 JPH4Q96JJ6 628 aa13.09□□□□□ -0.31
PCYT1A-201ENST00000292823 SALL2Q9Y467 1007 aaPredicted RBP13.08□□□□□ -0.32
PCYT1A-201ENST00000292823 CUX1P39880 1505 aa13.08□□□□□ -0.32
PCYT1A-201ENST00000292823 PTPRGP23470 1445 aa13.06□□□□□ -0.32
PCYT1A-201ENST00000292823 RRBP1Q9P2E9 1410 aaKnown RBP13.06□□□□□ -0.32
PCYT1A-201ENST00000292823 NBR1Q14596 966 aa13.05□□□□□ -0.32
PCYT1A-201ENST00000292823 UNC13AQ9UPW8 1703 aa13.05□□□□□ -0.32
PCYT1A-201ENST00000292823 IGF1RP08069 1367 aa13.04□□□□□ -0.32
PCYT1A-201ENST00000292823 GLIPR1L2Q4G1C9 344 aa13.04□□□□□ -0.32
PCYT1A-201ENST00000292823 MPHOSPH9Q99550 1183 aa13.04□□□□□ -0.32
PCYT1A-201ENST00000292823 EFCAB5A4FU69 1503 aa13.04□□□□□ -0.32
PCYT1A-201ENST00000292823 RAD54L2Q9Y4B4 1467 aa13.04□□□□□ -0.32
PCYT1A-201ENST00000292823 KNSTRNQ9Y448 316 aa13.04□□□□□ -0.32
PCYT1A-201ENST00000292823 EIF5BO60841 1220 aaKnown RBP13.04□□□□□ -0.32
PCYT1A-201ENST00000292823 OSCARQ8IYS5 282 aa13.03□□□□□ -0.32
PCYT1A-201ENST00000292823 PPM1GO15355 546 aaPredicted RBP13.02□□□□□ -0.32
PCYT1A-201ENST00000292823 TOPBP1Q92547 1522 aa13.02□□□□□ -0.33
PCYT1A-201ENST00000292823 CFAP53Q96M91 514 aa13.02□□□□□ -0.33
PCYT1A-201ENST00000292823 LRRC9Q6ZRR7 1453 aa13.01□□□□□ -0.33
PCYT1A-201ENST00000292823 BECN1Q14457 450 aa13.01□□□□□ -0.33
PCYT1A-201ENST00000292823 ROCK2O75116 1388 aaKnown RBP13.01□□□□□ -0.33
PCYT1A-201ENST00000292823 TRHP20396 242 aaPredicted RBP13□□□□□ -0.33
PCYT1A-201ENST00000292823 NOP58Q9Y2X3 529 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms