RNA–Protein interactions for RNA: ENST00000291892.10

RDH13-201, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 3,022 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-201ENST00000291892 EEA1Q15075 1411 aa18.84■□□□□ 0.61
RDH13-201ENST00000291892 EIF5BO60841 1220 aaKnown RBP18.82■□□□□ 0.6
RDH13-201ENST00000291892 TOP2AP11388 1531 aaKnown RBP18.81■□□□□ 0.6
RDH13-201ENST00000291892 CCER2I3L3R5 266 aa18.81■□□□□ 0.6
RDH13-201ENST00000291892 SMARCA2P51531 1590 aa18.79■□□□□ 0.6
RDH13-201ENST00000291892 PPP4R2Q9NY27 417 aa18.79■□□□□ 0.6
RDH13-201ENST00000291892 ERICH6BQ5W0A0 696 aa18.78■□□□□ 0.6
RDH13-201ENST00000291892 WDR97A6NE52 1622 aa18.77■□□□□ 0.6
RDH13-201ENST00000291892 CEP164Q9UPV0 1460 aa18.77■□□□□ 0.6
RDH13-201ENST00000291892 BAZ1BQ9UIG0 1483 aaKnown RBP18.74■□□□□ 0.59
RDH13-201ENST00000291892 RAB3GAP2Q9H2M9 1393 aa18.73■□□□□ 0.59
RDH13-201ENST00000291892 RAPGEF2Q9Y4G8 1499 aa18.72■□□□□ 0.59
RDH13-201ENST00000291892 NPM2Q86SE8 214 aaKnown RBP18.71■□□□□ 0.59
RDH13-201ENST00000291892 ZBTB47Q9UFB7 747 aaPredicted RBP18.71■□□□□ 0.59
RDH13-201ENST00000291892 ANP32AP39687 249 aaKnown RBP18.71■□□□□ 0.59
RDH13-201ENST00000291892 LAS1LQ9Y4W2 734 aaKnown RBP18.7■□□□□ 0.58
RDH13-201ENST00000291892 KIF21BO75037 1637 aa18.69■□□□□ 0.58
RDH13-201ENST00000291892 SENP3-EIF4A1A0A087X0R7 540 aa18.68■□□□□ 0.58
RDH13-201ENST00000291892 UBE2Q2Q8WVN8 375 aa18.68■□□□□ 0.58
RDH13-201ENST00000291892 FAM9BQ8IZU0 186 aa18.66■□□□□ 0.58
RDH13-201ENST00000291892 CNGB1Q14028 1251 aaPredicted RBP18.65■□□□□ 0.58
RDH13-201ENST00000291892 ATAD2BQ9ULI0 1458 aa18.65■□□□□ 0.58
RDH13-201ENST00000291892 CCNB3Q8WWL7 1395 aa18.65■□□□□ 0.58
RDH13-201ENST00000291892 IPO9Q96P70 1041 aaKnown RBP18.63■□□□□ 0.57
RDH13-201ENST00000291892 MAPKBP1O60336 1514 aa18.63■□□□□ 0.57
RDH13-201ENST00000291892 FAM50AQ14320 339 aaKnown RBP18.62■□□□□ 0.57
RDH13-201ENST00000291892 CCDC184Q52MB2 194 aa18.6■□□□□ 0.57
RDH13-201ENST00000291892 NEFMP07197 916 aa18.6■□□□□ 0.57
RDH13-201ENST00000291892 BRPF3Q9ULD4 1205 aa18.58■□□□□ 0.57
RDH13-201ENST00000291892 RRBP1Q9P2E9 1410 aaKnown RBP18.54■□□□□ 0.56
RDH13-201ENST00000291892 SYNJ1O43426 1573 aa18.52■□□□□ 0.56
RDH13-201ENST00000291892 TIMELESSQ9UNS1 1208 aa18.51■□□□□ 0.55
RDH13-201ENST00000291892 ATP1B4Q9UN42 357 aaPredicted RBP18.47■□□□□ 0.55
RDH13-201ENST00000291892 SETD5Q9C0A6 1442 aa18.47■□□□□ 0.55
RDH13-201ENST00000291892 ARAP1Q96P48 1450 aa18.47■□□□□ 0.55
RDH13-201ENST00000291892 TONSLQ96HA7 1378 aa18.46■□□□□ 0.55
RDH13-201ENST00000291892 MRS2Q9HD23 443 aa18.46■□□□□ 0.55
RDH13-201ENST00000291892 CUX2O14529 1486 aa18.44■□□□□ 0.54
RDH13-201ENST00000291892 AKNAQ7Z591 1439 aa18.41■□□□□ 0.54
RDH13-201ENST00000291892 WASHC2AQ641Q2 1341 aa18.4■□□□□ 0.54
RDH13-201ENST00000291892 PEG3Q9GZU2 1588 aa18.39■□□□□ 0.54
RDH13-201ENST00000291892 PKNOX2Q96KN3 472 aa18.36■□□□□ 0.53
RDH13-201ENST00000291892 HSPA5P11021 654 aaKnown RBP18.32■□□□□ 0.52
RDH13-201ENST00000291892 SLC4A3P48751 1232 aa18.31■□□□□ 0.52
RDH13-201ENST00000291892 ZBED9Q6R2W3 1325 aa18.3■□□□□ 0.52
RDH13-201ENST00000291892 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
RDH13-201ENST00000291892 POLR3GLQ9BT43 218 aa18.28■□□□□ 0.52
RDH13-201ENST00000291892 GSE1Q14687 1217 aa18.28■□□□□ 0.52
RDH13-201ENST00000291892 WASHC2CQ9Y4E1 1318 aa18.27■□□□□ 0.52
RDH13-201ENST00000291892 FRAT1Q92837 279 aaPredicted RBP18.27■□□□□ 0.51
RDH13-201ENST00000291892 PHLDB1Q86UU1 1377 aa18.26■□□□□ 0.51
RDH13-201ENST00000291892 P3H3Q8IVL6 736 aa18.26■□□□□ 0.51
RDH13-201ENST00000291892 PRKRIP1Q9H875 184 aaPredicted RBP18.26■□□□□ 0.51
RDH13-201ENST00000291892 C11orf95C9JLR9 678 aaPredicted RBP18.26■□□□□ 0.51
RDH13-201ENST00000291892 SKAP1Q86WV1 359 aa18.26■□□□□ 0.51
RDH13-201ENST00000291892 USP35Q9P2H5 1018 aa18.24■□□□□ 0.51
RDH13-201ENST00000291892 PPM1GO15355 546 aaPredicted RBP18.23■□□□□ 0.51
RDH13-201ENST00000291892 PDE4AP27815 886 aa18.23■□□□□ 0.51
RDH13-201ENST00000291892 NCAPD3P42695 1498 aa18.22■□□□□ 0.51
RDH13-201ENST00000291892 NFKBIBQ15653 356 aa18.19■□□□□ 0.5
RDH13-201ENST00000291892 NUDCQ9Y266 331 aa18.18■□□□□ 0.5
RDH13-201ENST00000291892 EIF4G2P78344 907 aaKnown RBP eCLIP18.17■□□□□ 0.5
RDH13-201ENST00000291892 VSIG10Q8N0Z9 540 aa18.17■□□□□ 0.5
RDH13-201ENST00000291892 EXOC6Q8TAG9 804 aa18.17■□□□□ 0.5
RDH13-201ENST00000291892 ARHGAP35Q9NRY4 1499 aa18.16■□□□□ 0.5
RDH13-201ENST00000291892 ARXQ96QS3 562 aa18.15■□□□□ 0.5
RDH13-201ENST00000291892 DAXXQ9UER7 740 aaPredicted RBP18.15■□□□□ 0.5
RDH13-201ENST00000291892 PRXQ9BXM0 1461 aa18.14■□□□□ 0.5
RDH13-201ENST00000291892 CNTLNQ9NXG0 1405 aa18.13■□□□□ 0.49
RDH13-201ENST00000291892 RSPH6AQ9H0K4 717 aa18.12■□□□□ 0.49
RDH13-201ENST00000291892 BACH2Q9BYV9 841 aa18.11■□□□□ 0.49
RDH13-201ENST00000291892 DCAF11Q8TEB1 546 aa18.1■□□□□ 0.49
RDH13-201ENST00000291892 CC2D2AQ9P2K1 1620 aa18.1■□□□□ 0.49
RDH13-201ENST00000291892 TOP2BQ02880 1626 aa18.1■□□□□ 0.49
RDH13-201ENST00000291892 CUX1P39880 1505 aa18.09■□□□□ 0.49
RDH13-201ENST00000291892 FHAD1B1AJZ9 1412 aa18.09■□□□□ 0.49
RDH13-201ENST00000291892 TCERG1O14776 1098 aaKnown RBP18.09■□□□□ 0.49
RDH13-201ENST00000291892 HMGXB3Q12766 1538 aa18.08■□□□□ 0.49
RDH13-201ENST00000291892 SMG6Q86US8 1419 aaKnown RBP18.08■□□□□ 0.48
RDH13-201ENST00000291892 ZMYND15Q9H091 742 aa18.07■□□□□ 0.48
RDH13-201ENST00000291892 FRAT2O75474 233 aaPredicted RBP18.07■□□□□ 0.48
RDH13-201ENST00000291892 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
RDH13-201ENST00000291892 NESP48681 1621 aa18.05■□□□□ 0.48
RDH13-201ENST00000291892 ERICH3Q5RHP9 1530 aa18.05■□□□□ 0.48
RDH13-201ENST00000291892 LRRC9Q6ZRR7 1453 aa18.05■□□□□ 0.48
RDH13-201ENST00000291892 FOXD1Q16676 465 aa18.04■□□□□ 0.48
RDH13-201ENST00000291892 CFTRP13569 1480 aa18.03■□□□□ 0.48
RDH13-201ENST00000291892 TIAM1Q13009 1591 aa18.03■□□□□ 0.48
RDH13-201ENST00000291892 CCDC7Q96M83 1385 aa18.03■□□□□ 0.48
RDH13-201ENST00000291892 GLIPR1L2Q4G1C9 344 aa18.03■□□□□ 0.48
RDH13-201ENST00000291892 CHIC2Q9UKJ5 165 aa18.02■□□□□ 0.48
RDH13-201ENST00000291892 CCDC18Q5T9S5 1454 aa18.02■□□□□ 0.48
RDH13-201ENST00000291892 RRP7BPQ9NSQ0 103 aa18.01■□□□□ 0.47
RDH13-201ENST00000291892 PLIN1O60240 522 aa18■□□□□ 0.47
RDH13-201ENST00000291892 FAM43AQ8N2R8 423 aa18■□□□□ 0.47
RDH13-201ENST00000291892 DDRGK1Q96HY6 314 aa18■□□□□ 0.47
RDH13-201ENST00000291892 CADPSQ9ULU8 1353 aa17.99■□□□□ 0.47
RDH13-201ENST00000291892 NAP1L5Q96NT1 182 aaPredicted RBP17.99■□□□□ 0.47
RDH13-201ENST00000291892 RRP1P56182 461 aaKnown RBP17.99■□□□□ 0.47
RDH13-201ENST00000291892 RNF123Q5XPI4 1314 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms