RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 JPH4Q96JJ6 628 aa18.09■□□□□ 0.49
SNF8-201ENST00000290330 PRG4Q92954 1404 aaPredicted RBP18.06■□□□□ 0.48
SNF8-201ENST00000290330 RUSC2Q8N2Y8 1516 aa18.03■□□□□ 0.48
SNF8-201ENST00000290330 CUL7Q14999 1698 aa18.03■□□□□ 0.48
SNF8-201ENST00000290330 CARMIL1Q5VZK9 1371 aa18.02■□□□□ 0.47
SNF8-201ENST00000290330 KIAA0586Q9BVV6 1533 aa18■□□□□ 0.47
SNF8-201ENST00000290330 RAPGEF2Q9Y4G8 1499 aa17.87■□□□□ 0.45
SNF8-201ENST00000290330 NPM1P06748 294 aaKnown RBP eCLIP17.82■□□□□ 0.44
SNF8-201ENST00000290330 IQGAP2Q13576 1575 aa17.82■□□□□ 0.44
SNF8-201ENST00000290330 CARMIL2Q6F5E8 1435 aa17.81■□□□□ 0.44
SNF8-201ENST00000290330 PTPRGP23470 1445 aa17.81■□□□□ 0.44
SNF8-201ENST00000290330 ADCY10Q96PN6 1610 aa17.8■□□□□ 0.44
SNF8-201ENST00000290330 TNIKQ9UKE5 1360 aa17.79■□□□□ 0.44
SNF8-201ENST00000290330 TTBK1Q5TCY1 1321 aaPredicted RBP17.76■□□□□ 0.43
SNF8-201ENST00000290330 MAPKBP1O60336 1514 aa17.76■□□□□ 0.43
SNF8-201ENST00000290330 DISP1Q96F81 1524 aa17.76■□□□□ 0.43
SNF8-201ENST00000290330 PRXQ9BXM0 1461 aa17.74■□□□□ 0.43
SNF8-201ENST00000290330 UGGT2Q9NYU1 1516 aa17.73■□□□□ 0.43
SNF8-201ENST00000290330 ABCC10Q5T3U5 1492 aa17.73■□□□□ 0.43
SNF8-201ENST00000290330 FAM69CQ0P6D2 419 aa17.72■□□□□ 0.43
SNF8-201ENST00000290330 KIF13AQ9H1H9 1805 aa17.72■□□□□ 0.43
SNF8-201ENST00000290330 UACAQ9BZF9 1416 aa17.68■□□□□ 0.42
SNF8-201ENST00000290330 ABCC2Q92887 1545 aa17.67■□□□□ 0.42
SNF8-201ENST00000290330 UHRF1BP1LA0JNW5 1464 aa17.67■□□□□ 0.42
SNF8-201ENST00000290330 DIP2BQ9P265 1576 aa17.66■□□□□ 0.42
SNF8-201ENST00000290330 KIAA0556O60303 1618 aa17.66■□□□□ 0.42
SNF8-201ENST00000290330 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
SNF8-201ENST00000290330 CTTNBP2Q8WZ74 1663 aa17.64■□□□□ 0.41
SNF8-201ENST00000290330 GOLGA3Q08378 1498 aa17.61■□□□□ 0.41
SNF8-201ENST00000290330 ASXL2Q76L83 1435 aa17.6■□□□□ 0.41
SNF8-201ENST00000290330 KDM5BQ9UGL1 1544 aa17.59■□□□□ 0.41
SNF8-201ENST00000290330 EEA1Q15075 1411 aa17.59■□□□□ 0.41
SNF8-201ENST00000290330 PLB1Q6P1J6 1458 aa17.58■□□□□ 0.41
SNF8-201ENST00000290330 FAM9AQ8IZU1 332 aaPredicted RBP17.53■□□□□ 0.4
SNF8-201ENST00000290330 ZCCHC11Q5TAX3 1644 aaKnown RBP17.51■□□□□ 0.39
SNF8-201ENST00000290330 GLI2P10070 1586 aa17.51■□□□□ 0.39
SNF8-201ENST00000290330 ABCA8O94911 1581 aa17.5■□□□□ 0.39
SNF8-201ENST00000290330 P3H3Q8IVL6 736 aa17.5■□□□□ 0.39
SNF8-201ENST00000290330 EPRSP07814 1512 aaKnown RBP17.49■□□□□ 0.39
SNF8-201ENST00000290330 TSPOAP1O95153 1857 aa17.49■□□□□ 0.39
SNF8-201ENST00000290330 KDM6BO15054 1643 aa17.46■□□□□ 0.39
SNF8-201ENST00000290330 WDR7Q9Y4E6 1490 aa17.45■□□□□ 0.38
SNF8-201ENST00000290330 SAMD9Q5K651 1589 aa17.44■□□□□ 0.38
SNF8-201ENST00000290330 PPRC1Q5VV67 1664 aaKnown RBP17.42■□□□□ 0.38
SNF8-201ENST00000290330 KIF21BO75037 1637 aa17.41■□□□□ 0.38
SNF8-201ENST00000290330 RANGAP1P46060 587 aaPredicted RBP17.41■□□□□ 0.38
SNF8-201ENST00000290330 MAP3K4Q9Y6R4 1608 aa17.4■□□□□ 0.38
SNF8-201ENST00000290330 ARID3CA6NKF2 412 aa17.39■□□□□ 0.37
SNF8-201ENST00000290330 KCNH8Q96L42 1107 aa17.39■□□□□ 0.37
SNF8-201ENST00000290330 ATP10BO94823 1461 aa17.38■□□□□ 0.37
SNF8-201ENST00000290330 TEX14Q8IWB6 1497 aa17.37■□□□□ 0.37
SNF8-201ENST00000290330 FHOD3Q2V2M9 1422 aa17.35■□□□□ 0.37
SNF8-201ENST00000290330 COL17A1Q9UMD9 1497 aaPredicted RBP17.35■□□□□ 0.37
SNF8-201ENST00000290330 CD109Q6YHK3 1445 aa17.34■□□□□ 0.37
SNF8-201ENST00000290330 RAPGEF6Q8TEU7 1601 aa17.33■□□□□ 0.37
SNF8-201ENST00000290330 EHMT2Q96KQ7 1210 aa17.33■□□□□ 0.36
SNF8-201ENST00000290330 UBTFP17480 764 aaKnown RBP17.32■□□□□ 0.36
SNF8-201ENST00000290330 MAGI3Q5TCQ9 1506 aa17.31■□□□□ 0.36
SNF8-201ENST00000290330 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
SNF8-201ENST00000290330 EFCAB5A4FU69 1503 aa17.31■□□□□ 0.36
SNF8-201ENST00000290330 NUP153P49790 1475 aaKnown RBP17.3■□□□□ 0.36
SNF8-201ENST00000290330 CFAP43Q8NDM7 1665 aa17.29■□□□□ 0.36
SNF8-201ENST00000290330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.29■□□□□ 0.36
SNF8-201ENST00000290330 HNRNPUL2Q1KMD3 747 aaKnown RBP17.29■□□□□ 0.36
SNF8-201ENST00000290330 KDM4FA0A1W2PPD8 638 aa17.26■□□□□ 0.35
SNF8-201ENST00000290330 ABCA9Q8IUA7 1624 aa17.21■□□□□ 0.35
SNF8-201ENST00000290330 PLEKHD1A6NEE1 506 aa17.21■□□□□ 0.35
SNF8-201ENST00000290330 ARHGAP35Q9NRY4 1499 aa17.2■□□□□ 0.34
SNF8-201ENST00000290330 PHLDB1Q86UU1 1377 aa17.17■□□□□ 0.34
SNF8-201ENST00000290330 ARAP3Q8WWN8 1544 aa17.17■□□□□ 0.34
SNF8-201ENST00000290330 FMN1Q68DA7 1419 aa17.17■□□□□ 0.34
SNF8-201ENST00000290330 ADGRL1O94910 1474 aa17.13■□□□□ 0.33
SNF8-201ENST00000290330 NEO1Q92859 1461 aa17.13■□□□□ 0.33
SNF8-201ENST00000290330 CDK13Q14004 1512 aaKnown RBP17.13■□□□□ 0.33
SNF8-201ENST00000290330 ATP1B4Q9UN42 357 aaPredicted RBP17.13■□□□□ 0.33
SNF8-201ENST00000290330 RAPGEF3O95398 923 aa17.1■□□□□ 0.33
SNF8-201ENST00000290330 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.1■□□□□ 0.33
SNF8-201ENST00000290330 HECW1Q76N89 1606 aa17.09■□□□□ 0.33
SNF8-201ENST00000290330 CDK11AQ9UQ88 783 aaPredicted RBP17.06■□□□□ 0.32
SNF8-201ENST00000290330 TTC37Q6PGP7 1564 aa17.06■□□□□ 0.32
SNF8-201ENST00000290330 PHF23Q9BUL5 403 aaPredicted RBP17.05■□□□□ 0.32
SNF8-201ENST00000290330 FANCAO15360 1455 aa17.05■□□□□ 0.32
SNF8-201ENST00000290330 AKNAQ7Z591 1439 aa17.04■□□□□ 0.32
SNF8-201ENST00000290330 PLCH2O75038 1416 aa17.02■□□□□ 0.31
SNF8-201ENST00000290330 FRMPD1Q5SYB0 1578 aa17.02■□□□□ 0.31
SNF8-201ENST00000290330 DENND4BO75064 1496 aaPredicted RBP17.01■□□□□ 0.31
SNF8-201ENST00000290330 CASKIN1Q8WXD9 1431 aa17.01■□□□□ 0.31
SNF8-201ENST00000290330 TROQ12816 1431 aaPredicted RBP17■□□□□ 0.31
SNF8-201ENST00000290330 CLIP1P30622 1438 aa16.99■□□□□ 0.31
SNF8-201ENST00000290330 CFAP74Q9C0B2 1584 aa16.98■□□□□ 0.31
SNF8-201ENST00000290330 LRRIQ1Q96JM4 1722 aa16.97■□□□□ 0.31
SNF8-201ENST00000290330 PCF11O94913 1555 aaKnown RBP16.97■□□□□ 0.31
SNF8-201ENST00000290330 EFCAB2Q5VUJ9 269 aa16.96■□□□□ 0.31
SNF8-201ENST00000290330 KIF14Q15058 1648 aa16.96■□□□□ 0.3
SNF8-201ENST00000290330 CCDC18Q5T9S5 1454 aa16.95■□□□□ 0.3
SNF8-201ENST00000290330 RICTORQ6R327 1708 aa16.95■□□□□ 0.3
SNF8-201ENST00000290330 SCAPERQ9BY12 1400 aa16.95■□□□□ 0.3
SNF8-201ENST00000290330 FYCO1Q9BQS8 1478 aa16.93■□□□□ 0.3
SNF8-201ENST00000290330 ZMYM4Q5VZL5 1548 aa16.91■□□□□ 0.3
SNF8-201ENST00000290330 MYO5CQ9NQX4 1742 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms