RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 RUSC2Q8N2Y8 1516 aa16.54■□□□□ 0.24
HMHB1-201ENST00000289448 CARMIL1Q5VZK9 1371 aa16.5■□□□□ 0.23
HMHB1-201ENST00000289448 CUL7Q14999 1698 aa16.5■□□□□ 0.23
HMHB1-201ENST00000289448 KIAA0586Q9BVV6 1533 aa16.49■□□□□ 0.23
HMHB1-201ENST00000289448 RAPGEF2Q9Y4G8 1499 aa16.35■□□□□ 0.21
HMHB1-201ENST00000289448 ADCY10Q96PN6 1610 aa16.34■□□□□ 0.21
HMHB1-201ENST00000289448 PTPRGP23470 1445 aa16.33■□□□□ 0.2
HMHB1-201ENST00000289448 IQGAP2Q13576 1575 aa16.32■□□□□ 0.2
HMHB1-201ENST00000289448 TTBK1Q5TCY1 1321 aaPredicted RBP16.32■□□□□ 0.2
HMHB1-201ENST00000289448 NPM1P06748 294 aaKnown RBP eCLIP16.31■□□□□ 0.2
HMHB1-201ENST00000289448 TNIKQ9UKE5 1360 aa16.3■□□□□ 0.2
HMHB1-201ENST00000289448 CARMIL2Q6F5E8 1435 aa16.29■□□□□ 0.2
HMHB1-201ENST00000289448 MAPKBP1O60336 1514 aa16.29■□□□□ 0.2
HMHB1-201ENST00000289448 DISP1Q96F81 1524 aa16.29■□□□□ 0.2
HMHB1-201ENST00000289448 FAM69CQ0P6D2 419 aa16.28■□□□□ 0.2
HMHB1-201ENST00000289448 KIF13AQ9H1H9 1805 aa16.28■□□□□ 0.2
HMHB1-201ENST00000289448 ABCC10Q5T3U5 1492 aa16.28■□□□□ 0.2
HMHB1-201ENST00000289448 UGGT2Q9NYU1 1516 aa16.24■□□□□ 0.19
HMHB1-201ENST00000289448 PRXQ9BXM0 1461 aa16.23■□□□□ 0.19
HMHB1-201ENST00000289448 DIP2BQ9P265 1576 aa16.21■□□□□ 0.19
HMHB1-201ENST00000289448 UACAQ9BZF9 1416 aa16.2■□□□□ 0.18
HMHB1-201ENST00000289448 ABCC2Q92887 1545 aa16.2■□□□□ 0.18
HMHB1-201ENST00000289448 UHRF1BP1LA0JNW5 1464 aa16.19■□□□□ 0.18
HMHB1-201ENST00000289448 KIAA0556O60303 1618 aa16.18■□□□□ 0.18
HMHB1-201ENST00000289448 ASXL2Q76L83 1435 aa16.15■□□□□ 0.18
HMHB1-201ENST00000289448 CSRNP3Q8WYN3 585 aa16.15■□□□□ 0.18
HMHB1-201ENST00000289448 CTTNBP2Q8WZ74 1663 aa16.13■□□□□ 0.17
HMHB1-201ENST00000289448 KDM5BQ9UGL1 1544 aa16.12■□□□□ 0.17
HMHB1-201ENST00000289448 PLB1Q6P1J6 1458 aa16.11■□□□□ 0.17
HMHB1-201ENST00000289448 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
HMHB1-201ENST00000289448 TSPOAP1O95153 1857 aa16.08■□□□□ 0.16
HMHB1-201ENST00000289448 ZCCHC11Q5TAX3 1644 aaKnown RBP16.06■□□□□ 0.16
HMHB1-201ENST00000289448 GLI2P10070 1586 aa16.06■□□□□ 0.16
HMHB1-201ENST00000289448 FAM9AQ8IZU1 332 aaPredicted RBP16.06■□□□□ 0.16
HMHB1-201ENST00000289448 EPRSP07814 1512 aaKnown RBP16.05■□□□□ 0.16
HMHB1-201ENST00000289448 P3H3Q8IVL6 736 aa16.05■□□□□ 0.16
HMHB1-201ENST00000289448 ABCA8O94911 1581 aa16.04■□□□□ 0.16
HMHB1-201ENST00000289448 EEA1Q15075 1411 aa16.04■□□□□ 0.16
HMHB1-201ENST00000289448 AEBP2Q6ZN18 517 aaPredicted RBP16.04■□□□□ 0.16
HMHB1-201ENST00000289448 KDM6BO15054 1643 aa16.02■□□□□ 0.16
HMHB1-201ENST00000289448 PPRC1Q5VV67 1664 aaKnown RBP16.02■□□□□ 0.15
HMHB1-201ENST00000289448 CHIC1Q5VXU3 224 aa16■□□□□ 0.15
HMHB1-201ENST00000289448 WDR7Q9Y4E6 1490 aa15.99■□□□□ 0.15
HMHB1-201ENST00000289448 ARID3CA6NKF2 412 aa15.98■□□□□ 0.15
HMHB1-201ENST00000289448 RANGAP1P46060 587 aaPredicted RBP15.97■□□□□ 0.15
HMHB1-201ENST00000289448 MAP3K4Q9Y6R4 1608 aa15.97■□□□□ 0.15
HMHB1-201ENST00000289448 COL17A1Q9UMD9 1497 aaPredicted RBP15.97■□□□□ 0.15
HMHB1-201ENST00000289448 SAMD9Q5K651 1589 aa15.96■□□□□ 0.15
HMHB1-201ENST00000289448 KCNH8Q96L42 1107 aa15.96■□□□□ 0.15
HMHB1-201ENST00000289448 ATP10BO94823 1461 aa15.94■□□□□ 0.14
HMHB1-201ENST00000289448 FHOD3Q2V2M9 1422 aa15.91■□□□□ 0.14
HMHB1-201ENST00000289448 KIF21BO75037 1637 aa15.9■□□□□ 0.14
HMHB1-201ENST00000289448 KDM4FA0A1W2PPD8 638 aa15.9■□□□□ 0.14
HMHB1-201ENST00000289448 EHMT2Q96KQ7 1210 aa15.9■□□□□ 0.14
HMHB1-201ENST00000289448 CD109Q6YHK3 1445 aa15.9■□□□□ 0.14
HMHB1-201ENST00000289448 TEX14Q8IWB6 1497 aa15.9■□□□□ 0.14
HMHB1-201ENST00000289448 MAGI3Q5TCQ9 1506 aa15.87■□□□□ 0.13
HMHB1-201ENST00000289448 RAPGEF6Q8TEU7 1601 aa15.86■□□□□ 0.13
HMHB1-201ENST00000289448 NUP153P49790 1475 aaKnown RBP15.85■□□□□ 0.13
HMHB1-201ENST00000289448 CFAP43Q8NDM7 1665 aa15.83■□□□□ 0.13
HMHB1-201ENST00000289448 UBTFP17480 764 aaKnown RBP15.83■□□□□ 0.12
HMHB1-201ENST00000289448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.82■□□□□ 0.12
HMHB1-201ENST00000289448 HNRNPUL2Q1KMD3 747 aaKnown RBP15.82■□□□□ 0.12
HMHB1-201ENST00000289448 EFCAB5A4FU69 1503 aa15.81■□□□□ 0.12
HMHB1-201ENST00000289448 ABCA9Q8IUA7 1624 aa15.78■□□□□ 0.12
HMHB1-201ENST00000289448 PLEKHD1A6NEE1 506 aa15.75■□□□□ 0.11
HMHB1-201ENST00000289448 ADGRL1O94910 1474 aa15.75■□□□□ 0.11
HMHB1-201ENST00000289448 ARHGAP35Q9NRY4 1499 aa15.75■□□□□ 0.11
HMHB1-201ENST00000289448 ARAP3Q8WWN8 1544 aa15.74■□□□□ 0.11
HMHB1-201ENST00000289448 CDK13Q14004 1512 aaKnown RBP15.72■□□□□ 0.11
HMHB1-201ENST00000289448 RAPGEF3O95398 923 aa15.71■□□□□ 0.11
HMHB1-201ENST00000289448 PHLDB1Q86UU1 1377 aa15.7■□□□□ 0.1
HMHB1-201ENST00000289448 FMN1Q68DA7 1419 aa15.68■□□□□ 0.1
HMHB1-201ENST00000289448 NEO1Q92859 1461 aa15.68■□□□□ 0.1
HMHB1-201ENST00000289448 ATP1B4Q9UN42 357 aaPredicted RBP15.68■□□□□ 0.1
HMHB1-201ENST00000289448 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.67■□□□□ 0.1
HMHB1-201ENST00000289448 TTC37Q6PGP7 1564 aa15.64■□□□□ 0.09
HMHB1-201ENST00000289448 FRMPD1Q5SYB0 1578 aa15.63■□□□□ 0.09
HMHB1-201ENST00000289448 AKNAQ7Z591 1439 aa15.62■□□□□ 0.09
HMHB1-201ENST00000289448 FANCAO15360 1455 aa15.62■□□□□ 0.09
HMHB1-201ENST00000289448 HECW1Q76N89 1606 aa15.61■□□□□ 0.09
HMHB1-201ENST00000289448 PLCH2O75038 1416 aa15.59■□□□□ 0.09
HMHB1-201ENST00000289448 DENND4BO75064 1496 aaPredicted RBP15.59■□□□□ 0.09
HMHB1-201ENST00000289448 CDK11AQ9UQ88 783 aaPredicted RBP15.58■□□□□ 0.08
HMHB1-201ENST00000289448 TROQ12816 1431 aaPredicted RBP15.56■□□□□ 0.08
HMHB1-201ENST00000289448 CASKIN1Q8WXD9 1431 aa15.56■□□□□ 0.08
HMHB1-201ENST00000289448 LRRIQ1Q96JM4 1722 aa15.56■□□□□ 0.08
HMHB1-201ENST00000289448 KIF14Q15058 1648 aa15.55■□□□□ 0.08
HMHB1-201ENST00000289448 RICTORQ6R327 1708 aa15.54■□□□□ 0.08
HMHB1-201ENST00000289448 PCF11O94913 1555 aaKnown RBP15.53■□□□□ 0.08
HMHB1-201ENST00000289448 CFAP74Q9C0B2 1584 aa15.53■□□□□ 0.08
HMHB1-201ENST00000289448 CLIP1P30622 1438 aa15.53■□□□□ 0.08
HMHB1-201ENST00000289448 SCAPERQ9BY12 1400 aa15.53■□□□□ 0.08
HMHB1-201ENST00000289448 EFCAB2Q5VUJ9 269 aa15.52■□□□□ 0.08
HMHB1-201ENST00000289448 YEATS2Q9ULM3 1422 aa15.51■□□□□ 0.07
HMHB1-201ENST00000289448 ARID4BQ4LE39 1312 aaPredicted RBP15.51■□□□□ 0.07
HMHB1-201ENST00000289448 ARHGEF40Q8TER5 1519 aa15.51■□□□□ 0.07
HMHB1-201ENST00000289448 POGZQ7Z3K3 1410 aa15.51■□□□□ 0.07
HMHB1-201ENST00000289448 ZMYM4Q5VZL5 1548 aa15.5■□□□□ 0.07
HMHB1-201ENST00000289448 ADAMTSL3P82987 1691 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms