RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 JPH4Q96JJ6 628 aa34.73■■■■□ 3.15
RAB28-201ENST00000288723 PRG4Q92954 1404 aaPredicted RBP34.67■■■■□ 3.14
RAB28-201ENST00000288723 KIAA0586Q9BVV6 1533 aa34.64■■■■□ 3.14
RAB28-201ENST00000288723 RAPGEF2Q9Y4G8 1499 aa34.57■■■■□ 3.13
RAB28-201ENST00000288723 CHIC1Q5VXU3 224 aa34.44■■■■□ 3.1
RAB28-201ENST00000288723 IQGAP2Q13576 1575 aa34.4■■■■□ 3.1
RAB28-201ENST00000288723 TRHP20396 242 aaPredicted RBP34.4■■■■□ 3.1
RAB28-201ENST00000288723 PRXQ9BXM0 1461 aa34.4■■■■□ 3.1
RAB28-201ENST00000288723 CSRNP3Q8WYN3 585 aa34.38■■■■□ 3.09
RAB28-201ENST00000288723 FAM9AQ8IZU1 332 aaPredicted RBP34.34■■■■□ 3.09
RAB28-201ENST00000288723 TTBK1Q5TCY1 1321 aaPredicted RBP34.31■■■■□ 3.08
RAB28-201ENST00000288723 CARMIL2Q6F5E8 1435 aa34.27■■■■□ 3.08
RAB28-201ENST00000288723 EEA1Q15075 1411 aa34.26■■■■□ 3.08
RAB28-201ENST00000288723 PTPRGP23470 1445 aa34.22■■■■□ 3.07
RAB28-201ENST00000288723 DISP1Q96F81 1524 aa34.22■■■■□ 3.07
RAB28-201ENST00000288723 CTTNBP2Q8WZ74 1663 aa34.2■■■■□ 3.07
RAB28-201ENST00000288723 UGGT2Q9NYU1 1516 aa34.2■■■■□ 3.07
RAB28-201ENST00000288723 TNIKQ9UKE5 1360 aa34.2■■■■□ 3.07
RAB28-201ENST00000288723 ADCY10Q96PN6 1610 aa34.13■■■■□ 3.05
RAB28-201ENST00000288723 NPM1P06748 294 aaKnown RBP eCLIP34.09■■■■□ 3.05
RAB28-201ENST00000288723 KIAA0556O60303 1618 aa34.08■■■■□ 3.05
RAB28-201ENST00000288723 EHMT2Q96KQ7 1210 aa34■■■■□ 3.03
RAB28-201ENST00000288723 GOLGA3Q08378 1498 aa33.98■■■■□ 3.03
RAB28-201ENST00000288723 UACAQ9BZF9 1416 aa33.96■■■■□ 3.03
RAB28-201ENST00000288723 P3H3Q8IVL6 736 aa33.94■■■■□ 3.02
RAB28-201ENST00000288723 KIF21BO75037 1637 aa33.94■■■■□ 3.02
RAB28-201ENST00000288723 RANGAP1P46060 587 aaPredicted RBP33.93■■■■□ 3.02
RAB28-201ENST00000288723 MAPKBP1O60336 1514 aa33.91■■■■□ 3.02
RAB28-201ENST00000288723 ABCC2Q92887 1545 aa33.9■■■■□ 3.02
RAB28-201ENST00000288723 UHRF1BP1LA0JNW5 1464 aa33.89■■■■□ 3.02
RAB28-201ENST00000288723 PLB1Q6P1J6 1458 aa33.84■■■■□ 3.01
RAB28-201ENST00000288723 FAM69CQ0P6D2 419 aa33.83■■■■□ 3.01
RAB28-201ENST00000288723 KIF13AQ9H1H9 1805 aa33.82■■■■□ 3.01
RAB28-201ENST00000288723 ABCC10Q5T3U5 1492 aa33.82■■■■□ 3
RAB28-201ENST00000288723 UBTFP17480 764 aaKnown RBP33.8■■■■□ 3
RAB28-201ENST00000288723 SAMD9Q5K651 1589 aa33.77■■■■□ 3
RAB28-201ENST00000288723 KDM5BQ9UGL1 1544 aa33.76■■■□□ 2.99
RAB28-201ENST00000288723 DIP2BQ9P265 1576 aa33.75■■■□□ 2.99
RAB28-201ENST00000288723 ASXL2Q76L83 1435 aa33.74■■■□□ 2.99
RAB28-201ENST00000288723 ABCA8O94911 1581 aa33.72■■■□□ 2.99
RAB28-201ENST00000288723 ZCCHC11Q5TAX3 1644 aaKnown RBP33.7■■■□□ 2.98
RAB28-201ENST00000288723 FHOD3Q2V2M9 1422 aa33.66■■■□□ 2.98
RAB28-201ENST00000288723 ARID3CA6NKF2 412 aa33.64■■■□□ 2.98
RAB28-201ENST00000288723 EFCAB5A4FU69 1503 aa33.56■■■□□ 2.96
RAB28-201ENST00000288723 EPRSP07814 1512 aaKnown RBP33.52■■■□□ 2.96
RAB28-201ENST00000288723 TSPOAP1O95153 1857 aa33.52■■■□□ 2.96
RAB28-201ENST00000288723 WDR7Q9Y4E6 1490 aa33.5■■■□□ 2.95
RAB28-201ENST00000288723 RAPGEF6Q8TEU7 1601 aa33.5■■■□□ 2.95
RAB28-201ENST00000288723 ATP10BO94823 1461 aa33.5■■■□□ 2.95
RAB28-201ENST00000288723 GLI2P10070 1586 aa33.48■■■□□ 2.95
RAB28-201ENST00000288723 KCNH8Q96L42 1107 aa33.47■■■□□ 2.95
RAB28-201ENST00000288723 ARHGAP35Q9NRY4 1499 aa33.45■■■□□ 2.95
RAB28-201ENST00000288723 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.42■■■□□ 2.94
RAB28-201ENST00000288723 HNRNPUL2Q1KMD3 747 aaKnown RBP33.42■■■□□ 2.94
RAB28-201ENST00000288723 NUP153P49790 1475 aaKnown RBP33.42■■■□□ 2.94
RAB28-201ENST00000288723 MAP3K4Q9Y6R4 1608 aa33.34■■■□□ 2.93
RAB28-201ENST00000288723 PPRC1Q5VV67 1664 aaKnown RBP33.34■■■□□ 2.93
RAB28-201ENST00000288723 ATP1B4Q9UN42 357 aaPredicted RBP33.3■■■□□ 2.92
RAB28-201ENST00000288723 FMN1Q68DA7 1419 aa33.29■■■□□ 2.92
RAB28-201ENST00000288723 KDM6BO15054 1643 aa33.26■■■□□ 2.92
RAB28-201ENST00000288723 CD109Q6YHK3 1445 aa33.25■■■□□ 2.91
RAB28-201ENST00000288723 PLEKHD1A6NEE1 506 aa33.21■■■□□ 2.91
RAB28-201ENST00000288723 CDK13Q14004 1512 aaKnown RBP33.2■■■□□ 2.91
RAB28-201ENST00000288723 TEX14Q8IWB6 1497 aa33.2■■■□□ 2.9
RAB28-201ENST00000288723 CFAP43Q8NDM7 1665 aa33.19■■■□□ 2.9
RAB28-201ENST00000288723 CLIP1P30622 1438 aa33.19■■■□□ 2.9
RAB28-201ENST00000288723 MAGI3Q5TCQ9 1506 aa33.14■■■□□ 2.9
RAB28-201ENST00000288723 HECW1Q76N89 1606 aa33.14■■■□□ 2.9
RAB28-201ENST00000288723 COL17A1Q9UMD9 1497 aaPredicted RBP33.14■■■□□ 2.9
RAB28-201ENST00000288723 LOC105371045A0A1W2PR82 267 aa33.12■■■□□ 2.89
RAB28-201ENST00000288723 ABCA9Q8IUA7 1624 aa33.1■■■□□ 2.89
RAB28-201ENST00000288723 PCF11O94913 1555 aaKnown RBP33.03■■■□□ 2.88
RAB28-201ENST00000288723 CASKIN1Q8WXD9 1431 aa33.02■■■□□ 2.88
RAB28-201ENST00000288723 LRRIQ1Q96JM4 1722 aa33■■■□□ 2.87
RAB28-201ENST00000288723 CEP162Q5TB80 1403 aa32.99■■■□□ 2.87
RAB28-201ENST00000288723 CDK11AQ9UQ88 783 aaPredicted RBP32.98■■■□□ 2.87
RAB28-201ENST00000288723 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.97■■■□□ 2.87
RAB28-201ENST00000288723 TTC37Q6PGP7 1564 aa32.93■■■□□ 2.86
RAB28-201ENST00000288723 FYCO1Q9BQS8 1478 aa32.91■■■□□ 2.86
RAB28-201ENST00000288723 TROQ12816 1431 aaPredicted RBP32.88■■■□□ 2.85
RAB28-201ENST00000288723 CCDC18Q5T9S5 1454 aa32.88■■■□□ 2.85
RAB28-201ENST00000288723 ARAP3Q8WWN8 1544 aa32.86■■■□□ 2.85
RAB28-201ENST00000288723 NEO1Q92859 1461 aa32.85■■■□□ 2.85
RAB28-201ENST00000288723 KIF14Q15058 1648 aa32.84■■■□□ 2.85
RAB28-201ENST00000288723 PHLDB1Q86UU1 1377 aa32.84■■■□□ 2.85
RAB28-201ENST00000288723 RAPGEF3O95398 923 aa32.81■■■□□ 2.84
RAB28-201ENST00000288723 FANCAO15360 1455 aa32.8■■■□□ 2.84
RAB28-201ENST00000288723 AEBP2Q6ZN18 517 aaPredicted RBP32.78■■■□□ 2.84
RAB28-201ENST00000288723 PLCH2O75038 1416 aa32.77■■■□□ 2.84
RAB28-201ENST00000288723 AKNAQ7Z591 1439 aa32.77■■■□□ 2.84
RAB28-201ENST00000288723 KDM4FA0A1W2PPD8 638 aa32.7■■■□□ 2.82
RAB28-201ENST00000288723 CFAP74Q9C0B2 1584 aa32.69■■■□□ 2.82
RAB28-201ENST00000288723 MYO5CQ9NQX4 1742 aa32.69■■■□□ 2.82
RAB28-201ENST00000288723 EFCAB2Q5VUJ9 269 aa32.67■■■□□ 2.82
RAB28-201ENST00000288723 DENND4BO75064 1496 aaPredicted RBP32.67■■■□□ 2.82
RAB28-201ENST00000288723 FRMPD1Q5SYB0 1578 aa32.66■■■□□ 2.82
RAB28-201ENST00000288723 ADGRL1O94910 1474 aa32.62■■■□□ 2.81
RAB28-201ENST00000288723 ARHGAP5Q13017 1502 aa32.62■■■□□ 2.81
RAB28-201ENST00000288723 SCAPERQ9BY12 1400 aa32.61■■■□□ 2.81
RAB28-201ENST00000288723 MTUS2Q5JR59 1369 aa32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms