RNA–Protein interactions for RNA: ENST00000287916.8

CLDN12-201, Transcript of claudin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN12, Length 3,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-201ENST00000287916 TONSLQ96HA7 1378 aa11.13□□□□□ -0.63
CLDN12-201ENST00000287916 RRP7BPQ9NSQ0 103 aa11.12□□□□□ -0.63
CLDN12-201ENST00000287916 RTN4Q9NQC3 1192 aaKnown RBP11.12□□□□□ -0.63
CLDN12-201ENST00000287916 FOXD1Q16676 465 aa11.11□□□□□ -0.63
CLDN12-201ENST00000287916 MSH5O43196 834 aa11.1□□□□□ -0.63
CLDN12-201ENST00000287916 MRS2Q9HD23 443 aa11.08□□□□□ -0.63
CLDN12-201ENST00000287916 SMARCA2P51531 1590 aa11.08□□□□□ -0.64
CLDN12-201ENST00000287916 TOP2AP11388 1531 aaKnown RBP11.07□□□□□ -0.64
CLDN12-201ENST00000287916 BICRAQ9NZM4 1560 aa11.05□□□□□ -0.64
CLDN12-201ENST00000287916 CCDC184Q52MB2 194 aa11.03□□□□□ -0.64
CLDN12-201ENST00000287916 KIF21BO75037 1637 aa11.03□□□□□ -0.64
CLDN12-201ENST00000287916 DEKP35659 375 aaKnown RBP11.03□□□□□ -0.64
CLDN12-201ENST00000287916 RTL5Q5HYW3 569 aaPredicted RBP11.03□□□□□ -0.64
CLDN12-201ENST00000287916 PPP1R15AO75807 674 aaPredicted RBP11.02□□□□□ -0.65
CLDN12-201ENST00000287916 SYNJ1O43426 1573 aa11.01□□□□□ -0.65
CLDN12-201ENST00000287916 CCDC136Q96JN2 1154 aa11□□□□□ -0.65
CLDN12-201ENST00000287916 ARAP1Q96P48 1450 aa10.99□□□□□ -0.65
CLDN12-201ENST00000287916 SMARCA4P51532 1647 aa10.99□□□□□ -0.65
CLDN12-201ENST00000287916 SETD5Q9C0A6 1442 aa10.98□□□□□ -0.65
CLDN12-201ENST00000287916 HSPA5P11021 654 aaKnown RBP10.98□□□□□ -0.65
CLDN12-201ENST00000287916 LAS1LQ9Y4W2 734 aaKnown RBP10.98□□□□□ -0.65
CLDN12-201ENST00000287916 WDR97A6NE52 1622 aa10.96□□□□□ -0.66
CLDN12-201ENST00000287916 PAK3O75914 559 aaPredicted RBP10.95□□□□□ -0.66
CLDN12-201ENST00000287916 ZNF777Q9ULD5 760 aaPredicted RBP10.95□□□□□ -0.66
CLDN12-201ENST00000287916 PHLDB1Q86UU1 1377 aa10.94□□□□□ -0.66
CLDN12-201ENST00000287916 ANP32AP39687 249 aaKnown RBP10.94□□□□□ -0.66
CLDN12-201ENST00000287916 EIF4G2P78344 907 aaKnown RBP eCLIP10.93□□□□□ -0.66
CLDN12-201ENST00000287916 KDM2AQ9Y2K7 1162 aa10.93□□□□□ -0.66
CLDN12-201ENST00000287916 PPP4R2Q9NY27 417 aa10.93□□□□□ -0.66
CLDN12-201ENST00000287916 CCER2I3L3R5 266 aa10.92□□□□□ -0.66
CLDN12-201ENST00000287916 MTUS2Q5JR59 1369 aa10.92□□□□□ -0.66
CLDN12-201ENST00000287916 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.92□□□□□ -0.66
CLDN12-201ENST00000287916 KIF27Q86VH2 1401 aa10.92□□□□□ -0.66
CLDN12-201ENST00000287916 ZBTB47Q9UFB7 747 aaPredicted RBP10.91□□□□□ -0.66
CLDN12-201ENST00000287916 NOP58Q9Y2X3 529 aaKnown RBP10.91□□□□□ -0.66
CLDN12-201ENST00000287916 EIF5BO60841 1220 aaKnown RBP10.9□□□□□ -0.67
CLDN12-201ENST00000287916 ARXQ96QS3 562 aa10.89□□□□□ -0.67
CLDN12-201ENST00000287916 CUX2O14529 1486 aa10.89□□□□□ -0.67
CLDN12-201ENST00000287916 EIF4G1Q04637 1599 aaKnown RBP10.89□□□□□ -0.67
CLDN12-201ENST00000287916 FHOD3Q2V2M9 1422 aa10.88□□□□□ -0.67
CLDN12-201ENST00000287916 TMC1Q8TDI8 760 aa10.87□□□□□ -0.67
CLDN12-201ENST00000287916 CARMIL1Q5VZK9 1371 aa10.86□□□□□ -0.67
CLDN12-201ENST00000287916 L3MBTL2Q969R5 705 aa10.86□□□□□ -0.67
CLDN12-201ENST00000287916 WASHC2AQ641Q2 1341 aa10.86□□□□□ -0.67
CLDN12-201ENST00000287916 SKAP1Q86WV1 359 aa10.86□□□□□ -0.67
CLDN12-201ENST00000287916 ANO8Q9HCE9 1232 aaPredicted RBP10.86□□□□□ -0.67
CLDN12-201ENST00000287916 DAXXQ9UER7 740 aaPredicted RBP10.86□□□□□ -0.67
CLDN12-201ENST00000287916 C11orf95C9JLR9 678 aaPredicted RBP10.85□□□□□ -0.67
CLDN12-201ENST00000287916 SLC4A1APQ9BWU0 796 aaKnown RBP10.85□□□□□ -0.67
CLDN12-201ENST00000287916 ARHGAP35Q9NRY4 1499 aa10.83□□□□□ -0.68
CLDN12-201ENST00000287916 SLC4A3P48751 1232 aa10.82□□□□□ -0.68
CLDN12-201ENST00000287916 RRBP1Q9P2E9 1410 aaKnown RBP10.82□□□□□ -0.68
CLDN12-201ENST00000287916 ATAD2BQ9ULI0 1458 aa10.82□□□□□ -0.68
CLDN12-201ENST00000287916 IL27Q8NEV9 243 aa10.82□□□□□ -0.68
CLDN12-201ENST00000287916 NEFMP07197 916 aa10.81□□□□□ -0.68
CLDN12-201ENST00000287916 PRKRIP1Q9H875 184 aaPredicted RBP10.81□□□□□ -0.68
CLDN12-201ENST00000287916 FBLN2P98095 1184 aa10.8□□□□□ -0.68
CLDN12-201ENST00000287916 FANCIQ9NVI1 1328 aa10.8□□□□□ -0.68
CLDN12-201ENST00000287916 PLIN1O60240 522 aa10.79□□□□□ -0.68
CLDN12-201ENST00000287916 MAPKBP1O60336 1514 aa10.79□□□□□ -0.68
CLDN12-201ENST00000287916 RGL3Q3MIN7 710 aa10.78□□□□□ -0.68
CLDN12-201ENST00000287916 AKNAQ7Z591 1439 aa10.78□□□□□ -0.68
CLDN12-201ENST00000287916 IGF1RP08069 1367 aa10.77□□□□□ -0.69
CLDN12-201ENST00000287916 MPHOSPH9Q99550 1183 aa10.77□□□□□ -0.69
CLDN12-201ENST00000287916 PRXQ9BXM0 1461 aa10.75□□□□□ -0.69
CLDN12-201ENST00000287916 SENP3Q9H4L4 574 aaPredicted RBP10.75□□□□□ -0.69
CLDN12-201ENST00000287916 CC2D1BQ5T0F9 858 aaKnown RBP10.74□□□□□ -0.69
CLDN12-201ENST00000287916 EXOC6Q8TAG9 804 aa10.74□□□□□ -0.69
CLDN12-201ENST00000287916 NBPF8Q3BBV2 869 aa10.74□□□□□ -0.69
CLDN12-201ENST00000287916 LRRC9Q6ZRR7 1453 aa10.73□□□□□ -0.69
CLDN12-201ENST00000287916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.73□□□□□ -0.69
CLDN12-201ENST00000287916 IPO9Q96P70 1041 aaKnown RBP10.73□□□□□ -0.69
CLDN12-201ENST00000287916 TDRD9Q8NDG6 1382 aaKnown RBP10.72□□□□□ -0.69
CLDN12-201ENST00000287916 TIMELESSQ9UNS1 1208 aa10.72□□□□□ -0.69
CLDN12-201ENST00000287916 ZNF644Q9H582 1327 aaPredicted RBP10.72□□□□□ -0.69
CLDN12-201ENST00000287916 RGS3P49796 1198 aa10.72□□□□□ -0.69
CLDN12-201ENST00000287916 CCDC18Q5T9S5 1454 aa10.72□□□□□ -0.69
CLDN12-201ENST00000287916 CARD11Q9BXL7 1154 aa10.7□□□□□ -0.7
CLDN12-201ENST00000287916 KIF7Q2M1P5 1343 aa10.7□□□□□ -0.7
CLDN12-201ENST00000287916 FHAD1B1AJZ9 1412 aa10.68□□□□□ -0.7
CLDN12-201ENST00000287916 CUX1P39880 1505 aa10.68□□□□□ -0.7
CLDN12-201ENST00000287916 NUDCQ9Y266 331 aa10.68□□□□□ -0.7
CLDN12-201ENST00000287916 CDCA7LQ96GN5 454 aa10.67□□□□□ -0.7
CLDN12-201ENST00000287916 ZBED9Q6R2W3 1325 aa10.67□□□□□ -0.7
CLDN12-201ENST00000287916 RAD54L2Q9Y4B4 1467 aa10.67□□□□□ -0.7
CLDN12-201ENST00000287916 DCAF11Q8TEB1 546 aa10.66□□□□□ -0.7
CLDN12-201ENST00000287916 AQRO60306 1485 aaKnown RBP eCLIP10.66□□□□□ -0.71e-6■■□□□ 14.5
CLDN12-201ENST00000287916 PRKCSHP14314 528 aaPredicted RBP10.65□□□□□ -0.7
CLDN12-201ENST00000287916 BRPF3Q9ULD4 1205 aa10.65□□□□□ -0.7
CLDN12-201ENST00000287916 PTPRKQ15262 1439 aa10.65□□□□□ -0.7
CLDN12-201ENST00000287916 PKD2Q13563 968 aa10.65□□□□□ -0.7
CLDN12-201ENST00000287916 MYT1LQ9UL68 1186 aa10.65□□□□□ -0.71
CLDN12-201ENST00000287916 CCDC7Q96M83 1385 aa10.65□□□□□ -0.71
CLDN12-201ENST00000287916 SPRYD3Q8NCJ5 442 aa10.64□□□□□ -0.71
CLDN12-201ENST00000287916 PEG3Q9GZU2 1588 aa10.64□□□□□ -0.71
CLDN12-201ENST00000287916 FGD6Q6ZV73 1430 aa10.64□□□□□ -0.71
CLDN12-201ENST00000287916 ST20-MTHFSA0A0A6YYL1 179 aa10.64□□□□□ -0.71
CLDN12-201ENST00000287916 PDE4AP27815 886 aa10.64□□□□□ -0.71
CLDN12-201ENST00000287916 RCAN3Q9UKA8 241 aa10.64□□□□□ -0.71
CLDN12-201ENST00000287916 TOP2BQ02880 1626 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms