RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 CCNB3Q8WWL7 1395 aa15.72■□□□□ 0.11
SKP2-202ENST00000274255 RAB3GAP2Q9H2M9 1393 aa15.72■□□□□ 0.11
SKP2-202ENST00000274255 EEA1Q15075 1411 aa15.69■□□□□ 0.1
SKP2-202ENST00000274255 KDM2AQ9Y2K7 1162 aa15.69■□□□□ 0.1
SKP2-202ENST00000274255 BAZ1AQ9NRL2 1556 aaPredicted RBP15.68■□□□□ 0.1
SKP2-202ENST00000274255 FBLN2P98095 1184 aa15.67■□□□□ 0.1
SKP2-202ENST00000274255 CLSPNQ9HAW4 1339 aa15.67■□□□□ 0.1
SKP2-202ENST00000274255 CCDC136Q96JN2 1154 aa15.66■□□□□ 0.1
SKP2-202ENST00000274255 DAXXQ9UER7 740 aaPredicted RBP15.62■□□□□ 0.09
SKP2-202ENST00000274255 SLC4A1APQ9BWU0 796 aaKnown RBP15.6■□□□□ 0.09
SKP2-202ENST00000274255 MTUS2Q5JR59 1369 aa15.59■□□□□ 0.09
SKP2-202ENST00000274255 LAS1LQ9Y4W2 734 aaKnown RBP15.58■□□□□ 0.08
SKP2-202ENST00000274255 PPP1R15AO75807 674 aaPredicted RBP15.58■□□□□ 0.08
SKP2-202ENST00000274255 ANP32AP39687 249 aaKnown RBP15.58■□□□□ 0.08
SKP2-202ENST00000274255 ARXQ96QS3 562 aa15.58■□□□□ 0.08
SKP2-202ENST00000274255 EIF4G2P78344 907 aaKnown RBP eCLIP15.57■□□□□ 0.08
SKP2-202ENST00000274255 HSPA5P11021 654 aaKnown RBP15.57■□□□□ 0.08
SKP2-202ENST00000274255 MYT1LQ9UL68 1186 aa15.57■□□□□ 0.08
SKP2-202ENST00000274255 NACADO15069 1562 aa15.55■□□□□ 0.08
SKP2-202ENST00000274255 TMC1Q8TDI8 760 aa15.55■□□□□ 0.08
SKP2-202ENST00000274255 SENP3Q9H4L4 574 aaPredicted RBP15.55■□□□□ 0.08
SKP2-202ENST00000274255 EIF5BO60841 1220 aaKnown RBP15.53■□□□□ 0.08
SKP2-202ENST00000274255 CCDC184Q52MB2 194 aa15.52■□□□□ 0.07
SKP2-202ENST00000274255 DEKP35659 375 aaKnown RBP15.52■□□□□ 0.07
SKP2-202ENST00000274255 ZBTB47Q9UFB7 747 aaPredicted RBP15.52■□□□□ 0.07
SKP2-202ENST00000274255 SETD5Q9C0A6 1442 aa15.51■□□□□ 0.07
SKP2-202ENST00000274255 KIF27Q86VH2 1401 aa15.48■□□□□ 0.07
SKP2-202ENST00000274255 TOP2AP11388 1531 aaKnown RBP15.48■□□□□ 0.07
SKP2-202ENST00000274255 RGL3Q3MIN7 710 aa15.48■□□□□ 0.07
SKP2-202ENST00000274255 MSH5O43196 834 aa15.47■□□□□ 0.07
SKP2-202ENST00000274255 PPP4R2Q9NY27 417 aa15.46■□□□□ 0.07
SKP2-202ENST00000274255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.46■□□□□ 0.071e-6■■□□□ 12.2
SKP2-202ENST00000274255 SMARCA2P51531 1590 aa15.45■□□□□ 0.06
SKP2-202ENST00000274255 CUX2O14529 1486 aa15.44■□□□□ 0.06
SKP2-202ENST00000274255 CARMIL1Q5VZK9 1371 aa15.42■□□□□ 0.06
SKP2-202ENST00000274255 L3MBTL2Q969R5 705 aa15.41■□□□□ 0.06
SKP2-202ENST00000274255 KIF21BO75037 1637 aa15.41■□□□□ 0.06
SKP2-202ENST00000274255 CCER2I3L3R5 266 aa15.41■□□□□ 0.06
SKP2-202ENST00000274255 NOP58Q9Y2X3 529 aaKnown RBP15.4■□□□□ 0.06
SKP2-202ENST00000274255 FHOD3Q2V2M9 1422 aa15.39■□□□□ 0.05
SKP2-202ENST00000274255 ARAP1Q96P48 1450 aa15.39■□□□□ 0.05
SKP2-202ENST00000274255 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.38■□□□□ 0.05
SKP2-202ENST00000274255 PHLDB1Q86UU1 1377 aa15.38■□□□□ 0.05
SKP2-202ENST00000274255 SMARCA4P51532 1647 aa15.36■□□□□ 0.05
SKP2-202ENST00000274255 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
SKP2-202ENST00000274255 SYNJ1O43426 1573 aa15.35■□□□□ 0.05
SKP2-202ENST00000274255 SLC4A3P48751 1232 aa15.33■□□□□ 0.04
SKP2-202ENST00000274255 CC2D1BQ5T0F9 858 aaKnown RBP15.33■□□□□ 0.04
SKP2-202ENST00000274255 NEFMP07197 916 aa15.32■□□□□ 0.04
SKP2-202ENST00000274255 SKAP1Q86WV1 359 aa15.3■□□□□ 0.04
SKP2-202ENST00000274255 PLIN1O60240 522 aa15.3■□□□□ 0.04
SKP2-202ENST00000274255 RGS3P49796 1198 aa15.3■□□□□ 0.04
SKP2-202ENST00000274255 MPHOSPH9Q99550 1183 aa15.29■□□□□ 0.04
SKP2-202ENST00000274255 TDRD9Q8NDG6 1382 aaKnown RBP15.29■□□□□ 0.04
SKP2-202ENST00000274255 WASHC2AQ641Q2 1341 aa15.29■□□□□ 0.04
SKP2-202ENST00000274255 WDR97A6NE52 1622 aa15.29■□□□□ 0.04
SKP2-202ENST00000274255 CARD11Q9BXL7 1154 aa15.29■□□□□ 0.04
SKP2-202ENST00000274255 PRKRIP1Q9H875 184 aaPredicted RBP15.27■□□□□ 0.03
SKP2-202ENST00000274255 CANXP27824 592 aaKnown RBP15.26■□□□□ 0.03
SKP2-202ENST00000274255 C11orf95C9JLR9 678 aaPredicted RBP15.26■□□□□ 0.03
SKP2-202ENST00000274255 ATAD2BQ9ULI0 1458 aa15.25■□□□□ 0.03
SKP2-202ENST00000274255 NEUROD2Q15784 382 aa15.24■□□□□ 0.03
SKP2-202ENST00000274255 DCAF11Q8TEB1 546 aa15.23■□□□□ 0.03
SKP2-202ENST00000274255 ZNF644Q9H582 1327 aaPredicted RBP15.22■□□□□ 0.03
SKP2-202ENST00000274255 ARHGAP35Q9NRY4 1499 aa15.21■□□□□ 0.03
SKP2-202ENST00000274255 EXOC6Q8TAG9 804 aa15.2■□□□□ 0.02
SKP2-202ENST00000274255 IGF1RP08069 1367 aa15.2■□□□□ 0.02
SKP2-202ENST00000274255 CFDP1Q9UEE9 299 aaPredicted RBP15.19■□□□□ 0.02
SKP2-202ENST00000274255 PKD2Q13563 968 aa15.19■□□□□ 0.02
SKP2-202ENST00000274255 TNNT2P45379 298 aaPredicted RBP15.19■□□□□ 0.02
SKP2-202ENST00000274255 CHGAP10645 457 aaKnown RBP15.17■□□□□ 0.02
SKP2-202ENST00000274255 SPRYD3Q8NCJ5 442 aa15.17■□□□□ 0.02
SKP2-202ENST00000274255 TIMELESSQ9UNS1 1208 aa15.16■□□□□ 0.02
SKP2-202ENST00000274255 ANO8Q9HCE9 1232 aaPredicted RBP15.16■□□□□ 0.02
SKP2-202ENST00000274255 NBPF8Q3BBV2 869 aa15.16■□□□□ 0.02
SKP2-202ENST00000274255 IL27Q8NEV9 243 aa15.16■□□□□ 0.02
SKP2-202ENST00000274255 AKNAQ7Z591 1439 aa15.15■□□□□ 0.02
SKP2-202ENST00000274255 FHAD1B1AJZ9 1412 aa15.13■□□□□ 0.01
SKP2-202ENST00000274255 EIF4G1Q04637 1599 aaKnown RBP15.13■□□□□ 0.01
SKP2-202ENST00000274255 RRBP1Q9P2E9 1410 aaKnown RBP15.12■□□□□ 0.01
SKP2-202ENST00000274255 TSPY4P0CV99 314 aa15.12■□□□□ 0.01
SKP2-202ENST00000274255 TSPY10P0CW01 314 aa15.12■□□□□ 0.01
SKP2-202ENST00000274255 IPO9Q96P70 1041 aaKnown RBP15.12■□□□□ 0.01
SKP2-202ENST00000274255 ST20-MTHFSA0A0A6YYL1 179 aa15.12■□□□□ 0.01
SKP2-202ENST00000274255 NUDCQ9Y266 331 aa15.11■□□□□ 0.01
SKP2-202ENST00000274255 CDCA7LQ96GN5 454 aa15.11■□□□□ 0.01
SKP2-202ENST00000274255 KIF7Q2M1P5 1343 aa15.11■□□□□ 0.01
SKP2-202ENST00000274255 FANCIQ9NVI1 1328 aa15.11■□□□□ 0.01
SKP2-202ENST00000274255 WDR43Q15061 677 aaKnown RBP eCLIP15.1■□□□□ 0.01
SKP2-202ENST00000274255 RCAN3Q9UKA8 241 aa15.1■□□□□ 0.01
SKP2-202ENST00000274255 CCDC18Q5T9S5 1454 aa15.09■□□□□ 0.01
SKP2-202ENST00000274255 RAD54L2Q9Y4B4 1467 aa15.08■□□□□ 0
SKP2-202ENST00000274255 FRAT1Q92837 279 aaPredicted RBP15.08■□□□□ 0
SKP2-202ENST00000274255 LRRC9Q6ZRR7 1453 aa15.06■□□□□ 0
SKP2-202ENST00000274255 ARID4BQ4LE39 1312 aaPredicted RBP15.05■□□□□ 0
SKP2-202ENST00000274255 CCDC146Q8IYE0 955 aa15.05■□□□□ 0
SKP2-202ENST00000274255 PRXQ9BXM0 1461 aa15.05■□□□□ -0
SKP2-202ENST00000274255 CHMP7Q8WUX9 453 aaPredicted RBP15.04■□□□□ -0
SKP2-202ENST00000274255 SLKQ9H2G2 1235 aaPredicted RBP15.04■□□□□ -0
SKP2-202ENST00000274255 PDE4AP27815 886 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms