RNA–Protein interactions for RNA: ENST00000273739.9

SLIT2-201, Transcript of slit guidance ligand 2, humanhuman

TSL 5 BASIC

Gene SLIT2, Length 5,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-201ENST00000273739 CEP164Q9UPV0 1460 aa16.96■□□□□ 0.31
SLIT2-201ENST00000273739 EEA1Q15075 1411 aa16.95■□□□□ 0.3
SLIT2-201ENST00000273739 DAXXQ9UER7 740 aaPredicted RBP16.95■□□□□ 0.3
SLIT2-201ENST00000273739 CLSPNQ9HAW4 1339 aa16.94■□□□□ 0.3
SLIT2-201ENST00000273739 CLIP1P30622 1438 aa16.93■□□□□ 0.3
SLIT2-201ENST00000273739 CARMIL1Q5VZK9 1371 aa16.93■□□□□ 0.3
SLIT2-201ENST00000273739 KDM2AQ9Y2K7 1162 aa16.93■□□□□ 0.3
SLIT2-201ENST00000273739 LMOD2Q6P5Q4 547 aa16.93■□□□□ 0.3
SLIT2-201ENST00000273739 DIEXFQ68CQ4 756 aaKnown RBP16.92■□□□□ 0.3
SLIT2-201ENST00000273739 TONSLQ96HA7 1378 aa16.91■□□□□ 0.3
SLIT2-201ENST00000273739 RRP7BPQ9NSQ0 103 aa16.89■□□□□ 0.29
SLIT2-201ENST00000273739 CANXP27824 592 aaKnown RBP16.89■□□□□ 0.29
SLIT2-201ENST00000273739 MYO15BQ96JP2 1530 aa16.88■□□□□ 0.29
SLIT2-201ENST00000273739 ANP32CO43423 234 aa16.86■□□□□ 0.29
SLIT2-201ENST00000273739 KANK1Q14678 1352 aa16.85■□□□□ 0.29
SLIT2-201ENST00000273739 CCNB3Q8WWL7 1395 aa16.85■□□□□ 0.29
SLIT2-201ENST00000273739 GOLGA3Q08378 1498 aa16.84■□□□□ 0.29
SLIT2-201ENST00000273739 GGT6Q6P531 493 aa16.84■□□□□ 0.29
SLIT2-201ENST00000273739 BCL11AQ9H165 835 aa16.83■□□□□ 0.28
SLIT2-201ENST00000273739 ACIN1Q9UKV3 1341 aaKnown RBP16.81■□□□□ 0.28
SLIT2-201ENST00000273739 EFCAB2Q5VUJ9 269 aa16.81■□□□□ 0.28
SLIT2-201ENST00000273739 ATAD2BQ9ULI0 1458 aa16.8■□□□□ 0.28
SLIT2-201ENST00000273739 RGL3Q3MIN7 710 aa16.8■□□□□ 0.28
SLIT2-201ENST00000273739 POGKQ9P215 609 aa16.8■□□□□ 0.28
SLIT2-201ENST00000273739 JPH4Q96JJ6 628 aa16.78■□□□□ 0.28
SLIT2-201ENST00000273739 MROH2BQ7Z745 1585 aa16.77■□□□□ 0.28
SLIT2-201ENST00000273739 FANCD2Q9BXW9 1451 aa16.75■□□□□ 0.27
SLIT2-201ENST00000273739 TMC1Q8TDI8 760 aa16.75■□□□□ 0.27
SLIT2-201ENST00000273739 CCDC88BA6NC98 1476 aa16.75■□□□□ 0.27
SLIT2-201ENST00000273739 ABCC8Q09428 1581 aa16.73■□□□□ 0.27
SLIT2-201ENST00000273739 FHAD1B1AJZ9 1412 aa16.71■□□□□ 0.27
SLIT2-201ENST00000273739 FAM69CQ0P6D2 419 aa16.71■□□□□ 0.26
SLIT2-201ENST00000273739 EID1Q9Y6B2 187 aa16.68■□□□□ 0.26
SLIT2-201ENST00000273739 ARXQ96QS3 562 aa16.65■□□□□ 0.26
SLIT2-201ENST00000273739 NPHP1O15259 732 aa16.63■□□□□ 0.25
SLIT2-201ENST00000273739 PTPRGP23470 1445 aa16.63■□□□□ 0.25
SLIT2-201ENST00000273739 RTL5Q5HYW3 569 aaPredicted RBP16.62■□□□□ 0.25
SLIT2-201ENST00000273739 CDCA8Q53HL2 280 aa16.6■□□□□ 0.25
SLIT2-201ENST00000273739 TOP2AP11388 1531 aaKnown RBP16.6■□□□□ 0.25
SLIT2-201ENST00000273739 CCDC9Q9Y3X0 531 aaKnown RBP16.59■□□□□ 0.25
SLIT2-201ENST00000273739 GTF3C3Q9Y5Q9 886 aa16.58■□□□□ 0.24
SLIT2-201ENST00000273739 WDR43Q15061 677 aaKnown RBP eCLIP16.57■□□□□ 0.24
SLIT2-201ENST00000273739 PPM1GO15355 546 aaPredicted RBP16.57■□□□□ 0.24
SLIT2-201ENST00000273739 CEP162Q5TB80 1403 aa16.57■□□□□ 0.24
SLIT2-201ENST00000273739 ZNF316A6NFI3 1004 aaPredicted RBP16.56■□□□□ 0.24
SLIT2-201ENST00000273739 KIF3BO15066 747 aa16.56■□□□□ 0.24
SLIT2-201ENST00000273739 SMARCA4P51532 1647 aa16.55■□□□□ 0.24
SLIT2-201ENST00000273739 SPAG9O60271 1321 aaKnown RBP16.55■□□□□ 0.24
SLIT2-201ENST00000273739 WASHC2CQ9Y4E1 1318 aa16.54■□□□□ 0.24
SLIT2-201ENST00000273739 TNIKQ9UKE5 1360 aa16.52■□□□□ 0.24
SLIT2-201ENST00000273739 FMN1Q68DA7 1419 aa16.51■□□□□ 0.23
SLIT2-201ENST00000273739 NCAPD3P42695 1498 aa16.51■□□□□ 0.23
SLIT2-201ENST00000273739 DNAJC5BQ9UF47 199 aa16.51■□□□□ 0.23
SLIT2-201ENST00000273739 CFAP53Q96M91 514 aa16.5■□□□□ 0.23
SLIT2-201ENST00000273739 CC2D2AQ9P2K1 1620 aa16.47■□□□□ 0.23
SLIT2-201ENST00000273739 PAK3O75914 559 aaPredicted RBP16.47■□□□□ 0.23
SLIT2-201ENST00000273739 WIZO95785 1651 aa16.47■□□□□ 0.23
SLIT2-201ENST00000273739 SRPK2P78362 688 aaKnown RBP16.46■□□□□ 0.23
SLIT2-201ENST00000273739 RSPH4AQ5TD94 716 aa16.46■□□□□ 0.23
SLIT2-201ENST00000273739 STK26Q9P289 416 aa16.46■□□□□ 0.23
SLIT2-201ENST00000273739 RAPGEF2Q9Y4G8 1499 aa16.45■□□□□ 0.22
SLIT2-201ENST00000273739 CSB-PGBD3P0DP91 1061 aa16.45■□□□□ 0.22
SLIT2-201ENST00000273739 SAFB2Q14151 953 aaKnown RBP eCLIP16.45■□□□□ 0.22
SLIT2-201ENST00000273739 CARD11Q9BXL7 1154 aa16.44■□□□□ 0.22
SLIT2-201ENST00000273739 MEX3CQ5U5Q3 659 aaKnown RBP16.44■□□□□ 0.22
SLIT2-201ENST00000273739 SOX12O15370 315 aa16.44■□□□□ 0.22
SLIT2-201ENST00000273739 GAPVD1Q14C86 1478 aa16.44■□□□□ 0.22
SLIT2-201ENST00000273739 EIF4G2P78344 907 aaKnown RBP eCLIP16.43■□□□□ 0.22
SLIT2-201ENST00000273739 MRC2Q9UBG0 1479 aa16.43■□□□□ 0.22
SLIT2-201ENST00000273739 HNRNPMP52272 730 aaKnown RBP eCLIP16.43■□□□□ 0.22
SLIT2-201ENST00000273739 KNSTRNQ9Y448 316 aa16.42■□□□□ 0.22
SLIT2-201ENST00000273739 AQRO60306 1485 aaKnown RBP eCLIP16.4■□□□□ 0.22
SLIT2-201ENST00000273739 SALL2Q9Y467 1007 aaPredicted RBP16.39■□□□□ 0.21
SLIT2-201ENST00000273739 PHF23Q9BUL5 403 aaPredicted RBP16.39■□□□□ 0.21
SLIT2-201ENST00000273739 ANKRD30AQ9BXX3 1397 aa16.38■□□□□ 0.21
SLIT2-201ENST00000273739 NUDCQ9Y266 331 aa16.36■□□□□ 0.21
SLIT2-201ENST00000273739 DCAF11Q8TEB1 546 aa16.36■□□□□ 0.21
SLIT2-201ENST00000273739 CCDC18Q5T9S5 1454 aa16.35■□□□□ 0.21
SLIT2-201ENST00000273739 FGD5Q6ZNL6 1462 aa16.34■□□□□ 0.21
SLIT2-201ENST00000273739 ARHGAP35Q9NRY4 1499 aa16.34■□□□□ 0.21
SLIT2-201ENST00000273739 FAM9BQ8IZU0 186 aa16.33■□□□□ 0.2
SLIT2-201ENST00000273739 RAD54L2Q9Y4B4 1467 aa16.32■□□□□ 0.2
SLIT2-201ENST00000273739 HDGFL2Q7Z4V5 671 aaPredicted RBP16.32■□□□□ 0.2
SLIT2-201ENST00000273739 MAPK8IP3Q9UPT6 1336 aa16.31■□□□□ 0.2
SLIT2-201ENST00000273739 IFT140Q96RY7 1462 aa16.31■□□□□ 0.2
SLIT2-201ENST00000273739 FHOD3Q2V2M9 1422 aa16.31■□□□□ 0.2
SLIT2-201ENST00000273739 GRIN2BQ13224 1484 aa16.31■□□□□ 0.2
SLIT2-201ENST00000273739 DDX10Q13206 875 aaKnown RBP16.31■□□□□ 0.2
SLIT2-201ENST00000273739 NESP48681 1621 aa16.3■□□□□ 0.2
SLIT2-201ENST00000273739 NGDNQ8NEJ9 315 aaKnown RBP16.3■□□□□ 0.2
SLIT2-201ENST00000273739 NUP155O75694 1391 aa16.3■□□□□ 0.2
SLIT2-201ENST00000273739 PKD2Q13563 968 aa16.3■□□□□ 0.2
SLIT2-201ENST00000273739 MYH16Q9H6N6 1097 aa16.29■□□□□ 0.2
SLIT2-201ENST00000273739 NUTM2DQ5VT03 806 aaPredicted RBP16.28■□□□□ 0.2
SLIT2-201ENST00000273739 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.27■□□□□ 0.2
SLIT2-201ENST00000273739 TNNT2P45379 298 aaPredicted RBP16.27■□□□□ 0.2
SLIT2-201ENST00000273739 TMF1P82094 1093 aa16.25■□□□□ 0.19
SLIT2-201ENST00000273739 TMX4Q9H1E5 349 aaPredicted RBP16.25■□□□□ 0.19
SLIT2-201ENST00000273739 DCAF8L1A6NGE4 600 aa16.25■□□□□ 0.19
SLIT2-201ENST00000273739 PRG4Q92954 1404 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms