RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 FAM69CQ0P6D2 419 aa15.56■□□□□ 0.08
CPNE9-201ENST00000273027 GOLGA3Q08378 1498 aa15.54■□□□□ 0.08
CPNE9-201ENST00000273027 ILDR1Q86SU0 546 aaPredicted RBP15.54■□□□□ 0.08
CPNE9-201ENST00000273027 KIF21BO75037 1637 aa15.54■□□□□ 0.08
CPNE9-201ENST00000273027 TOP2BQ02880 1626 aa15.54■□□□□ 0.08
CPNE9-201ENST00000273027 NPM1P06748 294 aaKnown RBP eCLIP15.53■□□□□ 0.08
CPNE9-201ENST00000273027 CSRNP3Q8WYN3 585 aa15.53■□□□□ 0.08
CPNE9-201ENST00000273027 NUP160Q12769 1436 aa15.52■□□□□ 0.08
CPNE9-201ENST00000273027 KIF13AQ9H1H9 1805 aa15.52■□□□□ 0.08
CPNE9-201ENST00000273027 KDM4FA0A1W2PPD8 638 aa15.51■□□□□ 0.07
CPNE9-201ENST00000273027 PPARGC1BQ86YN6 1023 aaKnown RBP15.51■□□□□ 0.07
CPNE9-201ENST00000273027 CEP162Q5TB80 1403 aa15.51■□□□□ 0.07
CPNE9-201ENST00000273027 ADAMTS12P58397 1594 aa15.5■□□□□ 0.07
CPNE9-201ENST00000273027 JPH4Q96JJ6 628 aa15.5■□□□□ 0.07
CPNE9-201ENST00000273027 PRG4Q92954 1404 aaPredicted RBP15.5■□□□□ 0.07
CPNE9-201ENST00000273027 SHROOM2Q13796 1616 aa15.47■□□□□ 0.07
CPNE9-201ENST00000273027 FHAD1B1AJZ9 1412 aa15.47■□□□□ 0.07
CPNE9-201ENST00000273027 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
CPNE9-201ENST00000273027 ABCC10Q5T3U5 1492 aa15.44■□□□□ 0.06
CPNE9-201ENST00000273027 KDM6BO15054 1643 aa15.36■□□□□ 0.05
CPNE9-201ENST00000273027 MAPKBP1O60336 1514 aa15.34■□□□□ 0.05
CPNE9-201ENST00000273027 DIP2BQ9P265 1576 aa15.34■□□□□ 0.05
CPNE9-201ENST00000273027 TSPOAP1O95153 1857 aa15.33■□□□□ 0.05
CPNE9-201ENST00000273027 UBTFP17480 764 aaKnown RBP15.33■□□□□ 0.04
CPNE9-201ENST00000273027 RUSC2Q8N2Y8 1516 aa15.32■□□□□ 0.04
CPNE9-201ENST00000273027 TTBK1Q5TCY1 1321 aaPredicted RBP15.3■□□□□ 0.04
CPNE9-201ENST00000273027 ADCY10Q96PN6 1610 aa15.3■□□□□ 0.04
CPNE9-201ENST00000273027 EHMT2Q96KQ7 1210 aa15.29■□□□□ 0.04
CPNE9-201ENST00000273027 CLIP1P30622 1438 aa15.26■□□□□ 0.03
CPNE9-201ENST00000273027 VPS8Q8N3P4 1428 aa15.26■□□□□ 0.03
CPNE9-201ENST00000273027 CCER1Q8TC90 406 aaPredicted RBP15.26■□□□□ 0.03
CPNE9-201ENST00000273027 CUL7Q14999 1698 aa15.25■□□□□ 0.03
CPNE9-201ENST00000273027 PTPRGP23470 1445 aa15.21■□□□□ 0.03
CPNE9-201ENST00000273027 ADGRL1O94910 1474 aa15.2■□□□□ 0.02
CPNE9-201ENST00000273027 KIAA0586Q9BVV6 1533 aa15.2■□□□□ 0.02
CPNE9-201ENST00000273027 PRXQ9BXM0 1461 aa15.18■□□□□ 0.02
CPNE9-201ENST00000273027 APLP2Q06481 763 aa15.17■□□□□ 0.02
CPNE9-201ENST00000273027 KIF27Q86VH2 1401 aa15.16■□□□□ 0.02
CPNE9-201ENST00000273027 RAPGEF2Q9Y4G8 1499 aa15.15■□□□□ 0.02
CPNE9-201ENST00000273027 ASXL2Q76L83 1435 aa15.15■□□□□ 0.02
CPNE9-201ENST00000273027 IGF1RP08069 1367 aa15.14■□□□□ 0.01
CPNE9-201ENST00000273027 PLB1Q6P1J6 1458 aa15.13■□□□□ 0.01
CPNE9-201ENST00000273027 HECW2Q9P2P5 1572 aa15.12■□□□□ 0.01
CPNE9-201ENST00000273027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.12■□□□□ 0.01
CPNE9-201ENST00000273027 COL17A1Q9UMD9 1497 aaPredicted RBP15.12■□□□□ 0.01
CPNE9-201ENST00000273027 ABCC2Q92887 1545 aa15.12■□□□□ 0.01
CPNE9-201ENST00000273027 CLSPNQ9HAW4 1339 aa15.11■□□□□ 0.01
CPNE9-201ENST00000273027 CARMIL2Q6F5E8 1435 aa15.1■□□□□ 0.01
CPNE9-201ENST00000273027 PPRC1Q5VV67 1664 aaKnown RBP15.09■□□□□ 0.01
CPNE9-201ENST00000273027 GLI2P10070 1586 aa15.08■□□□□ 0
CPNE9-201ENST00000273027 IQGAP2Q13576 1575 aa15.04■□□□□ -0
CPNE9-201ENST00000273027 UACAQ9BZF9 1416 aa15.04■□□□□ -0
CPNE9-201ENST00000273027 FBXO41Q8TF61 875 aa15.04■□□□□ -0
CPNE9-201ENST00000273027 CARMIL1Q5VZK9 1371 aa15.03■□□□□ -0
CPNE9-201ENST00000273027 EPRSP07814 1512 aaKnown RBP15.02■□□□□ -0
CPNE9-201ENST00000273027 MAP3K1Q13233 1512 aa15.02■□□□□ -0
CPNE9-201ENST00000273027 TEX14Q8IWB6 1497 aa15.02■□□□□ -0
CPNE9-201ENST00000273027 UHRF1BP1LA0JNW5 1464 aa15.01□□□□□ -0.01
CPNE9-201ENST00000273027 PELP1Q8IZL8 1130 aaKnown RBP14.99□□□□□ -0.01
CPNE9-201ENST00000273027 MAP3K4Q9Y6R4 1608 aa14.98□□□□□ -0.01
CPNE9-201ENST00000273027 ZNF316A6NFI3 1004 aaPredicted RBP14.97□□□□□ -0.01
CPNE9-201ENST00000273027 DIEXFQ68CQ4 756 aaKnown RBP14.97□□□□□ -0.01
CPNE9-201ENST00000273027 KCNH8Q96L42 1107 aa14.97□□□□□ -0.01
CPNE9-201ENST00000273027 KDM5BQ9UGL1 1544 aa14.97□□□□□ -0.01
CPNE9-201ENST00000273027 CENPBP07199 599 aaPredicted RBP14.95□□□□□ -0.02
CPNE9-201ENST00000273027 DISP1Q96F81 1524 aa14.94□□□□□ -0.02
CPNE9-201ENST00000273027 CTTNBP2Q8WZ74 1663 aa14.93□□□□□ -0.02
CPNE9-201ENST00000273027 RRBP1Q9P2E9 1410 aaKnown RBP14.93□□□□□ -0.02
CPNE9-201ENST00000273027 UGGT2Q9NYU1 1516 aa14.93□□□□□ -0.02
CPNE9-201ENST00000273027 ZCCHC11Q5TAX3 1644 aaKnown RBP14.92□□□□□ -0.02
CPNE9-201ENST00000273027 CD109Q6YHK3 1445 aa14.91□□□□□ -0.02
CPNE9-201ENST00000273027 KIAA0556O60303 1618 aa14.9□□□□□ -0.02
CPNE9-201ENST00000273027 WDR7Q9Y4E6 1490 aa14.89□□□□□ -0.03
CPNE9-201ENST00000273027 ARHGAP35Q9NRY4 1499 aa14.89□□□□□ -0.03
CPNE9-201ENST00000273027 MAGI3Q5TCQ9 1506 aa14.85□□□□□ -0.03
CPNE9-201ENST00000273027 ACIN1Q9UKV3 1341 aaKnown RBP14.85□□□□□ -0.03
CPNE9-201ENST00000273027 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
CPNE9-201ENST00000273027 EFCAB5A4FU69 1503 aa14.82□□□□□ -0.04
CPNE9-201ENST00000273027 TIAM1Q13009 1591 aa14.81□□□□□ -0.04
CPNE9-201ENST00000273027 ARID3CA6NKF2 412 aa14.8□□□□□ -0.04
CPNE9-201ENST00000273027 PTPRMP28827 1452 aa14.8□□□□□ -0.04
CPNE9-201ENST00000273027 CFAP43Q8NDM7 1665 aa14.8□□□□□ -0.04
CPNE9-201ENST00000273027 ARID4BQ4LE39 1312 aaPredicted RBP14.79□□□□□ -0.04
CPNE9-201ENST00000273027 CCNB3Q8WWL7 1395 aa14.79□□□□□ -0.04
CPNE9-201ENST00000273027 RAPGEF3O95398 923 aa14.77□□□□□ -0.05
CPNE9-201ENST00000273027 ABCA8O94911 1581 aa14.77□□□□□ -0.05
CPNE9-201ENST00000273027 DHX57Q6P158 1386 aaKnown RBP14.76□□□□□ -0.05
CPNE9-201ENST00000273027 ARAP3Q8WWN8 1544 aa14.76□□□□□ -0.05
CPNE9-201ENST00000273027 LMTK3Q96Q04 1460 aa14.76□□□□□ -0.05
CPNE9-201ENST00000273027 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.75□□□□□ -0.05
CPNE9-201ENST00000273027 SCAF1Q9H7N4 1312 aaKnown RBP14.75□□□□□ -0.05
CPNE9-201ENST00000273027 PLPPR3Q6T4P5 718 aa14.73□□□□□ -0.05
CPNE9-201ENST00000273027 ADAMTSL3P82987 1691 aa14.72□□□□□ -0.05
CPNE9-201ENST00000273027 LRRC9Q6ZRR7 1453 aa14.72□□□□□ -0.05
CPNE9-201ENST00000273027 FYCO1Q9BQS8 1478 aa14.72□□□□□ -0.05
CPNE9-201ENST00000273027 HSPA2P54652 639 aa14.72□□□□□ -0.05
CPNE9-201ENST00000273027 KANK4Q5T7N3 995 aaPredicted RBP14.71□□□□□ -0.05
CPNE9-201ENST00000273027 P3H3Q8IVL6 736 aa14.7□□□□□ -0.06
CPNE9-201ENST00000273027 PHLDB1Q86UU1 1377 aa14.7□□□□□ -0.06
CPNE9-201ENST00000273027 PCF11O94913 1555 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms