RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 PBRM1Q86U86 1689 aa30.63■■■□□ 2.49
UBE2F-201ENST00000272930 FHAD1B1AJZ9 1412 aa30.63■■■□□ 2.49
UBE2F-201ENST00000272930 TIAM1Q13009 1591 aa30.61■■■□□ 2.49
UBE2F-201ENST00000272930 WDR62O43379 1518 aa30.6■■■□□ 2.49
UBE2F-201ENST00000272930 PCF11O94913 1555 aaKnown RBP30.55■■■□□ 2.48
UBE2F-201ENST00000272930 HNRNPUL2Q1KMD3 747 aaKnown RBP30.55■■■□□ 2.48
UBE2F-201ENST00000272930 RRBP1Q9P2E9 1410 aaKnown RBP30.55■■■□□ 2.48
UBE2F-201ENST00000272930 CFAP43Q8NDM7 1665 aa30.53■■■□□ 2.48
UBE2F-201ENST00000272930 FHOD3Q2V2M9 1422 aa30.51■■■□□ 2.47
UBE2F-201ENST00000272930 SAMD9Q5K651 1589 aa30.5■■■□□ 2.47
UBE2F-201ENST00000272930 AQRO60306 1485 aaKnown RBP eCLIP30.49■■■□□ 2.473e-6■■■□□ 18.3
UBE2F-201ENST00000272930 IFT140Q96RY7 1462 aa30.49■■■□□ 2.47
UBE2F-201ENST00000272930 ADAMTS12P58397 1594 aa30.47■■■□□ 2.47
UBE2F-201ENST00000272930 FYCO1Q9BQS8 1478 aa30.47■■■□□ 2.47
UBE2F-201ENST00000272930 LRRC9Q6ZRR7 1453 aa30.45■■■□□ 2.47
UBE2F-201ENST00000272930 P3H3Q8IVL6 736 aa30.44■■■□□ 2.46
UBE2F-201ENST00000272930 CASKIN1Q8WXD9 1431 aa30.43■■■□□ 2.46
UBE2F-201ENST00000272930 GRIN2BQ13224 1484 aa30.42■■■□□ 2.46
UBE2F-201ENST00000272930 FMN1Q68DA7 1419 aa30.4■■■□□ 2.46
UBE2F-201ENST00000272930 THOC2Q8NI27 1593 aaKnown RBP30.38■■■□□ 2.45
UBE2F-201ENST00000272930 CCNB3Q8WWL7 1395 aa30.37■■■□□ 2.45
UBE2F-201ENST00000272930 ERCC6Q03468 1493 aa30.36■■■□□ 2.45
UBE2F-201ENST00000272930 ZNF608Q9ULD9 1512 aaPredicted RBP30.35■■■□□ 2.45
UBE2F-201ENST00000272930 SNAPC4Q5SXM2 1469 aa30.34■■■□□ 2.45
UBE2F-201ENST00000272930 IQGAP2Q13576 1575 aa30.28■■■□□ 2.44
UBE2F-201ENST00000272930 EIF4G3O43432 1585 aaKnown RBP30.27■■■□□ 2.44
UBE2F-201ENST00000272930 LRRIQ1Q96JM4 1722 aa30.23■■■□□ 2.43
UBE2F-201ENST00000272930 PHLDB1Q86UU1 1377 aa30.22■■■□□ 2.43
UBE2F-201ENST00000272930 ATP1B4Q9UN42 357 aaPredicted RBP30.19■■■□□ 2.42
UBE2F-201ENST00000272930 UGGT2Q9NYU1 1516 aa30.14■■■□□ 2.41
UBE2F-201ENST00000272930 CLSPNQ9HAW4 1339 aa30.09■■■□□ 2.41
UBE2F-201ENST00000272930 GRIN2AQ12879 1464 aa30.09■■■□□ 2.41
UBE2F-201ENST00000272930 MAGI1Q96QZ7 1491 aaPredicted RBP30.09■■■□□ 2.41
UBE2F-201ENST00000272930 DHX57Q6P158 1386 aaKnown RBP30.09■■■□□ 2.41
UBE2F-201ENST00000272930 KIAA0586Q9BVV6 1533 aa30.07■■■□□ 2.4
UBE2F-201ENST00000272930 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.04■■■□□ 2.4
UBE2F-201ENST00000272930 HECW1Q76N89 1606 aa30.03■■■□□ 2.4
UBE2F-201ENST00000272930 CCDC18Q5T9S5 1454 aa30.02■■■□□ 2.4
UBE2F-201ENST00000272930 MTUS2Q5JR59 1369 aa30.02■■■□□ 2.4
UBE2F-201ENST00000272930 EHBP1L1Q8N3D4 1523 aa30.01■■■□□ 2.39
UBE2F-201ENST00000272930 SUPT6HQ7KZ85 1726 aaKnown RBP29.98■■■□□ 2.39
UBE2F-201ENST00000272930 SYNJ2O15056 1496 aa29.98■■■□□ 2.39
UBE2F-201ENST00000272930 ITGAEP38570 1179 aa29.98■■■□□ 2.39
UBE2F-201ENST00000272930 KIAA0556O60303 1618 aa29.97■■■□□ 2.39
UBE2F-201ENST00000272930 FGD6Q6ZV73 1430 aa29.95■■■□□ 2.38
UBE2F-201ENST00000272930 DISP1Q96F81 1524 aa29.95■■■□□ 2.38
UBE2F-201ENST00000272930 FAM50AQ14320 339 aaKnown RBP29.93■■■□□ 2.38
UBE2F-201ENST00000272930 NCOA2Q15596 1464 aa29.92■■■□□ 2.38
UBE2F-201ENST00000272930 RAB3GAP2Q9H2M9 1393 aa29.92■■■□□ 2.38
UBE2F-201ENST00000272930 MAGI3Q5TCQ9 1506 aa29.91■■■□□ 2.38
UBE2F-201ENST00000272930 CEP170Q5SW79 1584 aa29.91■■■□□ 2.38
UBE2F-201ENST00000272930 ARHGEF11O15085 1522 aa29.9■■■□□ 2.38
UBE2F-201ENST00000272930 EPRSP07814 1512 aaKnown RBP29.9■■■□□ 2.38
UBE2F-201ENST00000272930 SETD5Q9C0A6 1442 aa29.9■■■□□ 2.38
UBE2F-201ENST00000272930 MYOM3Q5VTT5 1437 aa29.86■■■□□ 2.37
UBE2F-201ENST00000272930 CHMP7Q8WUX9 453 aaPredicted RBP29.84■■■□□ 2.37
UBE2F-201ENST00000272930 NUP160Q12769 1436 aa29.83■■■□□ 2.37
UBE2F-201ENST00000272930 ZNF316A6NFI3 1004 aaPredicted RBP29.8■■■□□ 2.36
UBE2F-201ENST00000272930 CDK13Q14004 1512 aaKnown RBP29.79■■■□□ 2.36
UBE2F-201ENST00000272930 RAPGEF6Q8TEU7 1601 aa29.77■■■□□ 2.36
UBE2F-201ENST00000272930 PTPN23Q9H3S7 1636 aa29.75■■■□□ 2.35
UBE2F-201ENST00000272930 MAPKBP1O60336 1514 aa29.75■■■□□ 2.35
UBE2F-201ENST00000272930 DIEXFQ68CQ4 756 aaKnown RBP29.72■■■□□ 2.35
UBE2F-201ENST00000272930 NUP153P49790 1475 aaKnown RBP29.71■■■□□ 2.35
UBE2F-201ENST00000272930 TCOF1Q13428 1488 aaKnown RBP29.69■■■□□ 2.34
UBE2F-201ENST00000272930 FBLN2P98095 1184 aa29.67■■■□□ 2.34
UBE2F-201ENST00000272930 PTPRKQ15262 1439 aa29.67■■■□□ 2.34
UBE2F-201ENST00000272930 CARMIL2Q6F5E8 1435 aa29.64■■■□□ 2.34
UBE2F-201ENST00000272930 HFM1A2PYH4 1435 aa29.63■■■□□ 2.33
UBE2F-201ENST00000272930 MIA2Q96PC5 1412 aa29.62■■■□□ 2.33
UBE2F-201ENST00000272930 JPH4Q96JJ6 628 aa29.61■■■□□ 2.33
UBE2F-201ENST00000272930 PLB1Q6P1J6 1458 aa29.55■■■□□ 2.32
UBE2F-201ENST00000272930 ARID3CA6NKF2 412 aa29.54■■■□□ 2.32
UBE2F-201ENST00000272930 NAIPQ13075 1403 aa29.54■■■□□ 2.32
UBE2F-201ENST00000272930 CHD1O14646 1710 aa29.52■■■□□ 2.32
UBE2F-201ENST00000272930 GCC2Q8IWJ2 1684 aa29.5■■■□□ 2.31
UBE2F-201ENST00000272930 CDK11AQ9UQ88 783 aaPredicted RBP29.5■■■□□ 2.31
UBE2F-201ENST00000272930 ABCA8O94911 1581 aa29.48■■■□□ 2.31
UBE2F-201ENST00000272930 AKNAQ7Z591 1439 aa29.47■■■□□ 2.31
UBE2F-201ENST00000272930 ADCY10Q96PN6 1610 aa29.47■■■□□ 2.31
UBE2F-201ENST00000272930 TROQ12816 1431 aaPredicted RBP29.47■■■□□ 2.31
UBE2F-201ENST00000272930 UACAQ9BZF9 1416 aa29.46■■■□□ 2.31
UBE2F-201ENST00000272930 PRG4Q92954 1404 aaPredicted RBP29.4■■■□□ 2.3
UBE2F-201ENST00000272930 ITSN2Q9NZM3 1697 aa29.4■■■□□ 2.3
UBE2F-201ENST00000272930 DNMT1P26358 1616 aaKnown RBP29.38■■■□□ 2.29
UBE2F-201ENST00000272930 TIMELESSQ9UNS1 1208 aa29.37■■■□□ 2.29
UBE2F-201ENST00000272930 SHROOM2Q13796 1616 aa29.36■■■□□ 2.29
UBE2F-201ENST00000272930 KIF14Q15058 1648 aa29.35■■■□□ 2.29
UBE2F-201ENST00000272930 SIN3AQ96ST3 1273 aa29.34■■■□□ 2.29
UBE2F-201ENST00000272930 DAPK1P53355 1430 aa29.32■■■□□ 2.28
UBE2F-201ENST00000272930 ATP10BO94823 1461 aa29.3■■■□□ 2.28
UBE2F-201ENST00000272930 ROCK1Q13464 1354 aa29.29■■■□□ 2.28
UBE2F-201ENST00000272930 GPATCH8Q9UKJ3 1502 aaKnown RBP29.28■■■□□ 2.28
UBE2F-201ENST00000272930 RRP7BPQ9NSQ0 103 aa29.28■■■□□ 2.28
UBE2F-201ENST00000272930 CHIC2Q9UKJ5 165 aa29.28■■■□□ 2.28
UBE2F-201ENST00000272930 ABCC5O15440 1437 aa29.28■■■□□ 2.28
UBE2F-201ENST00000272930 KDM6BO15054 1643 aa29.28■■■□□ 2.28
UBE2F-201ENST00000272930 PTPRGP23470 1445 aa29.26■■■□□ 2.27
UBE2F-201ENST00000272930 NEUROD1Q13562 356 aa29.25■■■□□ 2.27
UBE2F-201ENST00000272930 CAMSAP2Q08AD1 1489 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms