RNA–Protein interactions for RNA: ENST00000271588.8

HMCN1-201, Transcript of hemicentin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCN1, Length 18,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-201ENST00000271588 CASC1Q6TDU7 716 aa6.45□□□□□ -1.38
HMCN1-201ENST00000271588 RB1CC1Q8TDY2 1594 aa6.45□□□□□ -1.38
HMCN1-201ENST00000271588 EIF4G2P78344 907 aaKnown RBP eCLIP6.44□□□□□ -1.38
HMCN1-201ENST00000271588 HNRNPUQ00839 825 aaKnown RBP eCLIP6.44□□□□□ -1.38
HMCN1-201ENST00000271588 PPP4R2Q9NY27 417 aa6.44□□□□□ -1.38
HMCN1-201ENST00000271588 CHAF1AQ13111 956 aaPredicted RBP6.43□□□□□ -1.38
HMCN1-201ENST00000271588 TMC1Q8TDI8 760 aa6.43□□□□□ -1.38
HMCN1-201ENST00000271588 CEP162Q5TB80 1403 aa6.43□□□□□ -1.38
HMCN1-201ENST00000271588 PHLDB1Q86UU1 1377 aa6.43□□□□□ -1.38
HMCN1-201ENST00000271588 WDR43Q15061 677 aaKnown RBP eCLIP6.43□□□□□ -1.38
HMCN1-201ENST00000271588 PNNQ9H307 717 aaKnown RBP6.42□□□□□ -1.38
HMCN1-201ENST00000271588 CDK11BP21127 795 aaKnown RBP6.42□□□□□ -1.38
HMCN1-201ENST00000271588 NGEFQ8N5V2 710 aa6.4□□□□□ -1.39
HMCN1-201ENST00000271588 BAZ1AQ9NRL2 1556 aaPredicted RBP6.4□□□□□ -1.39
HMCN1-201ENST00000271588 SCRIBQ14160 1630 aa6.4□□□□□ -1.39
HMCN1-201ENST00000271588 ZRSR1Q15695 479 aaKnown RBP6.39□□□□□ -1.39
HMCN1-201ENST00000271588 ROCK2O75116 1388 aaKnown RBP6.39□□□□□ -1.39
HMCN1-201ENST00000271588 MTUS2Q5JR59 1369 aa6.39□□□□□ -1.39
HMCN1-201ENST00000271588 CFAP53Q96M91 514 aa6.39□□□□□ -1.39
HMCN1-201ENST00000271588 NBR1Q14596 966 aa6.38□□□□□ -1.39
HMCN1-201ENST00000271588 ABCC9O60706 1549 aa6.38□□□□□ -1.39
HMCN1-201ENST00000271588 MRS2Q9HD23 443 aa6.38□□□□□ -1.39
HMCN1-201ENST00000271588 CHMP4CQ96CF2 233 aa6.38□□□□□ -1.39
HMCN1-201ENST00000271588 NOP58Q9Y2X3 529 aaKnown RBP6.38□□□□□ -1.39
HMCN1-201ENST00000271588 RTN4Q9NQC3 1192 aaKnown RBP6.37□□□□□ -1.39
HMCN1-201ENST00000271588 KIF27Q86VH2 1401 aa6.37□□□□□ -1.39
HMCN1-201ENST00000271588 AAMPQ13685 434 aa6.37□□□□□ -1.39
HMCN1-201ENST00000271588 TSPY4P0CV99 314 aa6.36□□□□□ -1.39
HMCN1-201ENST00000271588 TSPY10P0CW01 314 aa6.36□□□□□ -1.39
HMCN1-201ENST00000271588 MTERF4Q7Z6M4 381 aaKnown RBP6.36□□□□□ -1.39
HMCN1-201ENST00000271588 A0A0U1RQG5 324 aaPredicted RBP6.36□□□□□ -1.39
HMCN1-201ENST00000271588 ZNF326Q5BKZ1 582 aaKnown RBP6.36□□□□□ -1.39
HMCN1-201ENST00000271588 SYAP1Q96A49 352 aaPredicted RBP6.36□□□□□ -1.39
HMCN1-201ENST00000271588 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.36□□□□□ -1.39
HMCN1-201ENST00000271588 ANO8Q9HCE9 1232 aaPredicted RBP6.35□□□□□ -1.39
HMCN1-201ENST00000271588 HTATSF1O43719 755 aaKnown RBP6.35□□□□□ -1.39
HMCN1-201ENST00000271588 HDAC5Q9UQL6 1122 aa6.35□□□□□ -1.39
HMCN1-201ENST00000271588 RSPH6AQ9H0K4 717 aa6.35□□□□□ -1.39
HMCN1-201ENST00000271588 LAS1LQ9Y4W2 734 aaKnown RBP6.35□□□□□ -1.39
HMCN1-201ENST00000271588 TCERG1O14776 1098 aaKnown RBP6.34□□□□□ -1.39
HMCN1-201ENST00000271588 PDE3BQ13370 1112 aa6.34□□□□□ -1.39
HMCN1-201ENST00000271588 PKNOX2Q96KN3 472 aa6.34□□□□□ -1.39
HMCN1-201ENST00000271588 DEKP35659 375 aaKnown RBP6.34□□□□□ -1.39
HMCN1-201ENST00000271588 CCDC34Q96HJ3 373 aa6.34□□□□□ -1.4
HMCN1-201ENST00000271588 WRNQ14191 1432 aaPredicted RBP eCLIP6.33□□□□□ -1.42e-86■■■■■ 321.1
HMCN1-201ENST00000271588 GBP4Q96PP9 640 aa6.33□□□□□ -1.4
HMCN1-201ENST00000271588 BAZ1BQ9UIG0 1483 aaKnown RBP6.33□□□□□ -1.4
HMCN1-201ENST00000271588 NPM2Q86SE8 214 aaKnown RBP6.33□□□□□ -1.4
HMCN1-201ENST00000271588 PTMAP06454 111 aaKnown RBP6.32□□□□□ -1.4
HMCN1-201ENST00000271588 ESF1Q9H501 851 aaKnown RBP6.32□□□□□ -1.4
HMCN1-201ENST00000271588 MSNP26038 577 aaKnown RBP6.32□□□□□ -1.4
HMCN1-201ENST00000271588 MCCP23508 829 aa6.32□□□□□ -1.4
HMCN1-201ENST00000271588 CALD1Q05682 793 aaKnown RBP6.32□□□□□ -1.4
HMCN1-201ENST00000271588 CSPP1Q1MSJ5 1256 aa6.32□□□□□ -1.4
HMCN1-201ENST00000271588 MAP7D2Q96T17 732 aa6.32□□□□□ -1.4
HMCN1-201ENST00000271588 PLEKHG5O94827 1062 aa6.32□□□□□ -1.4
HMCN1-201ENST00000271588 CCNB3Q8WWL7 1395 aa6.32□□□□□ -1.4
HMCN1-201ENST00000271588 ISY1Q9ULR0 285 aaKnown RBP6.31□□□□□ -1.4
HMCN1-201ENST00000271588 VPS8Q8N3P4 1428 aa6.31□□□□□ -1.4
HMCN1-201ENST00000271588 PHF14O94880 888 aa6.31□□□□□ -1.4
HMCN1-201ENST00000271588 NUDCQ9Y266 331 aa6.31□□□□□ -1.4
HMCN1-201ENST00000271588 KIAA2012Q0VF49 1180 aa6.3□□□□□ -1.4
HMCN1-201ENST00000271588 VSIG10Q8N0Z9 540 aa6.3□□□□□ -1.4
HMCN1-201ENST00000271588 KTN1Q86UP2 1357 aaKnown RBP6.3□□□□□ -1.4
HMCN1-201ENST00000271588 NPM1P06748 294 aaKnown RBP eCLIP6.3□□□□□ -1.4
HMCN1-201ENST00000271588 DDX10Q13206 875 aaKnown RBP6.29□□□□□ -1.4
HMCN1-201ENST00000271588 DHX8Q14562 1220 aaKnown RBP6.29□□□□□ -1.4
HMCN1-201ENST00000271588 HSCBQ8IWL3 235 aa6.29□□□□□ -1.4
HMCN1-201ENST00000271588 GOLGA6L3A6NEY3 463 aa6.29□□□□□ -1.4
HMCN1-201ENST00000271588 RALBP1Q15311 655 aa6.29□□□□□ -1.4
HMCN1-201ENST00000271588 KNSTRNQ9Y448 316 aa6.29□□□□□ -1.4
HMCN1-201ENST00000271588 SKOR2Q2VWA4 1001 aaPredicted RBP6.29□□□□□ -1.4
HMCN1-201ENST00000271588 IL27Q8NEV9 243 aa6.28□□□□□ -1.4
HMCN1-201ENST00000271588 PDE4CQ08493 712 aa6.28□□□□□ -1.4
HMCN1-201ENST00000271588 DNTTIP2Q5QJE6 756 aaKnown RBP6.28□□□□□ -1.4
HMCN1-201ENST00000271588 FMN1Q68DA7 1419 aa6.28□□□□□ -1.4
HMCN1-201ENST00000271588 STAC3Q96MF2 364 aa6.28□□□□□ -1.4
HMCN1-201ENST00000271588 FAM9BQ8IZU0 186 aa6.27□□□□□ -1.4
HMCN1-201ENST00000271588 GOLGA6L1Q8N7Z2 621 aa6.27□□□□□ -1.41
HMCN1-201ENST00000271588 EIF3AQ14152 1382 aaKnown RBP6.27□□□□□ -1.41
HMCN1-201ENST00000271588 IPO8O15397 1037 aaKnown RBP6.27□□□□□ -1.41
HMCN1-201ENST00000271588 CALRP27797 417 aaKnown RBP6.27□□□□□ -1.41
HMCN1-201ENST00000271588 DDX11L8A8MPP1 907 aa6.27□□□□□ -1.41
HMCN1-201ENST00000271588 FANCIQ9NVI1 1328 aa6.27□□□□□ -1.41
HMCN1-201ENST00000271588 FTSJ3Q8IY81 847 aaKnown RBP6.26□□□□□ -1.41
HMCN1-201ENST00000271588 KIF3AQ9Y496 699 aa6.26□□□□□ -1.41
HMCN1-201ENST00000271588 NAP1L5Q96NT1 182 aaPredicted RBP6.26□□□□□ -1.41
HMCN1-201ENST00000271588 SMARCA2P51531 1590 aa6.26□□□□□ -1.41
HMCN1-201ENST00000271588 MAPK8IP3Q9UPT6 1336 aa6.26□□□□□ -1.41
HMCN1-201ENST00000271588 CNGB1Q14028 1251 aaPredicted RBP6.26□□□□□ -1.41
HMCN1-201ENST00000271588 MIER1Q8N108 512 aa6.25□□□□□ -1.41
HMCN1-201ENST00000271588 ARHGAP35Q9NRY4 1499 aa6.25□□□□□ -1.41
HMCN1-201ENST00000271588 SETD5Q9C0A6 1442 aa6.25□□□□□ -1.41
HMCN1-201ENST00000271588 TPM4P67936 248 aa6.25□□□□□ -1.41
HMCN1-201ENST00000271588 WWC1Q8IX03 1113 aa6.25□□□□□ -1.41
HMCN1-201ENST00000271588 ATP6V1DQ9Y5K8 247 aa6.25□□□□□ -1.41
HMCN1-201ENST00000271588 RSPH4AQ5TD94 716 aa6.24□□□□□ -1.41
HMCN1-201ENST00000271588 SUPT16HQ9Y5B9 1047 aaKnown RBP6.24□□□□□ -1.41
HMCN1-201ENST00000271588 PMFBP1Q8TBY8 1022 aa6.24□□□□□ -1.41
HMCN1-201ENST00000271588 STAG3Q9UJ98 1225 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms