RNA–Protein interactions for RNA: ENST00000269724.5

SAMD1-201, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene SAMD1, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-201ENST00000269724 KIAA0586Q9BVV6 1533 aa32.09■■■□□ 2.73
SAMD1-201ENST00000269724 PRXQ9BXM0 1461 aa32.06■■■□□ 2.72
SAMD1-201ENST00000269724 CSRNP3Q8WYN3 585 aa32.03■■■□□ 2.72
SAMD1-201ENST00000269724 JPH4Q96JJ6 628 aa32.01■■■□□ 2.71
SAMD1-201ENST00000269724 ARAP1Q96P48 1450 aa32.01■■■□□ 2.71
SAMD1-201ENST00000269724 PRG4Q92954 1404 aaPredicted RBP31.92■■■□□ 2.7
SAMD1-201ENST00000269724 CYB5RLQ6IPT4 315 aa31.92■■■□□ 2.7
SAMD1-201ENST00000269724 IQGAP2Q13576 1575 aa31.91■■■□□ 2.7
SAMD1-201ENST00000269724 ERCC6L2Q5T890 1561 aa31.91■■■□□ 2.7
SAMD1-201ENST00000269724 CTTNBP2Q8WZ74 1663 aa31.85■■■□□ 2.69
SAMD1-201ENST00000269724 FAM9AQ8IZU1 332 aaPredicted RBP31.81■■■□□ 2.68
SAMD1-201ENST00000269724 KIF21BO75037 1637 aa31.78■■■□□ 2.68
SAMD1-201ENST00000269724 UGGT2Q9NYU1 1516 aa31.76■■■□□ 2.68
SAMD1-201ENST00000269724 CARMIL2Q6F5E8 1435 aa31.75■■■□□ 2.67
SAMD1-201ENST00000269724 DISP1Q96F81 1524 aa31.66■■■□□ 2.66
SAMD1-201ENST00000269724 TNIKQ9UKE5 1360 aa31.62■■■□□ 2.65
SAMD1-201ENST00000269724 GOLGA3Q08378 1498 aa31.61■■■□□ 2.65
SAMD1-201ENST00000269724 KIAA0556O60303 1618 aa31.6■■■□□ 2.65
SAMD1-201ENST00000269724 PTPRGP23470 1445 aa31.57■■■□□ 2.64
SAMD1-201ENST00000269724 SAMD9Q5K651 1589 aa31.44■■■□□ 2.62
SAMD1-201ENST00000269724 ADCY10Q96PN6 1610 aa31.44■■■□□ 2.62
SAMD1-201ENST00000269724 UBTFP17480 764 aaKnown RBP31.43■■■□□ 2.62
SAMD1-201ENST00000269724 UHRF1BP1LA0JNW5 1464 aa31.39■■■□□ 2.62
SAMD1-201ENST00000269724 UACAQ9BZF9 1416 aa31.38■■■□□ 2.61
SAMD1-201ENST00000269724 TTBK1Q5TCY1 1321 aaPredicted RBP31.36■■■□□ 2.61
SAMD1-201ENST00000269724 EFCAB5A4FU69 1503 aa31.35■■■□□ 2.61
SAMD1-201ENST00000269724 NPM1P06748 294 aaKnown RBP eCLIP31.34■■■□□ 2.61
SAMD1-201ENST00000269724 ABCC2Q92887 1545 aa31.33■■■□□ 2.61
SAMD1-201ENST00000269724 EHMT2Q96KQ7 1210 aa31.31■■■□□ 2.6
SAMD1-201ENST00000269724 MAPKBP1O60336 1514 aa31.28■■■□□ 2.6
SAMD1-201ENST00000269724 ABCA8O94911 1581 aa31.26■■■□□ 2.59
SAMD1-201ENST00000269724 P3H3Q8IVL6 736 aa31.25■■■□□ 2.59
SAMD1-201ENST00000269724 PLB1Q6P1J6 1458 aa31.23■■■□□ 2.59
SAMD1-201ENST00000269724 RANGAP1P46060 587 aaPredicted RBP31.23■■■□□ 2.59
SAMD1-201ENST00000269724 TRHP20396 242 aaPredicted RBP31.22■■■□□ 2.59
SAMD1-201ENST00000269724 KDM5BQ9UGL1 1544 aa31.22■■■□□ 2.59
SAMD1-201ENST00000269724 FHOD3Q2V2M9 1422 aa31.17■■■□□ 2.58
SAMD1-201ENST00000269724 ARHGAP35Q9NRY4 1499 aa31.14■■■□□ 2.57
SAMD1-201ENST00000269724 ZCCHC11Q5TAX3 1644 aaKnown RBP31.13■■■□□ 2.57
SAMD1-201ENST00000269724 RAPGEF6Q8TEU7 1601 aa31.1■■■□□ 2.57
SAMD1-201ENST00000269724 ABCC10Q5T3U5 1492 aa31.09■■■□□ 2.57
SAMD1-201ENST00000269724 ASXL2Q76L83 1435 aa31.06■■■□□ 2.56
SAMD1-201ENST00000269724 KIF13AQ9H1H9 1805 aa31.05■■■□□ 2.56
SAMD1-201ENST00000269724 FMN1Q68DA7 1419 aa31.05■■■□□ 2.56
SAMD1-201ENST00000269724 DIP2BQ9P265 1576 aa31.03■■■□□ 2.56
SAMD1-201ENST00000269724 CLIP1P30622 1438 aa30.98■■■□□ 2.55
SAMD1-201ENST00000269724 ATP10BO94823 1461 aa30.98■■■□□ 2.55
SAMD1-201ENST00000269724 NUP153P49790 1475 aaKnown RBP30.97■■■□□ 2.55
SAMD1-201ENST00000269724 FAM69CQ0P6D2 419 aa30.96■■■□□ 2.55
SAMD1-201ENST00000269724 WDR7Q9Y4E6 1490 aa30.95■■■□□ 2.54
SAMD1-201ENST00000269724 GLI2P10070 1586 aa30.93■■■□□ 2.54
SAMD1-201ENST00000269724 EPRSP07814 1512 aaKnown RBP30.89■■■□□ 2.54
SAMD1-201ENST00000269724 LOC105371045A0A1W2PR82 267 aa30.88■■■□□ 2.53
SAMD1-201ENST00000269724 CEP162Q5TB80 1403 aa30.87■■■□□ 2.53
SAMD1-201ENST00000269724 HECW1Q76N89 1606 aa30.87■■■□□ 2.53
SAMD1-201ENST00000269724 ARID3CA6NKF2 412 aa30.83■■■□□ 2.53
SAMD1-201ENST00000269724 CASKIN1Q8WXD9 1431 aa30.8■■■□□ 2.52
SAMD1-201ENST00000269724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.79■■■□□ 2.52
SAMD1-201ENST00000269724 HNRNPUL2Q1KMD3 747 aaKnown RBP30.79■■■□□ 2.52
SAMD1-201ENST00000269724 MAP3K4Q9Y6R4 1608 aa30.77■■■□□ 2.52
SAMD1-201ENST00000269724 PCF11O94913 1555 aaKnown RBP30.75■■■□□ 2.51
SAMD1-201ENST00000269724 FYCO1Q9BQS8 1478 aa30.74■■■□□ 2.51
SAMD1-201ENST00000269724 PLEKHD1A6NEE1 506 aa30.73■■■□□ 2.51
SAMD1-201ENST00000269724 TSPOAP1O95153 1857 aa30.72■■■□□ 2.51
SAMD1-201ENST00000269724 KCNH8Q96L42 1107 aa30.72■■■□□ 2.51
SAMD1-201ENST00000269724 ATP1B4Q9UN42 357 aaPredicted RBP30.72■■■□□ 2.51
SAMD1-201ENST00000269724 CDK13Q14004 1512 aaKnown RBP30.72■■■□□ 2.51
SAMD1-201ENST00000269724 CFAP43Q8NDM7 1665 aa30.71■■■□□ 2.51
SAMD1-201ENST00000269724 CCDC18Q5T9S5 1454 aa30.69■■■□□ 2.5
SAMD1-201ENST00000269724 LRRIQ1Q96JM4 1722 aa30.67■■■□□ 2.5
SAMD1-201ENST00000269724 CDK11AQ9UQ88 783 aaPredicted RBP30.67■■■□□ 2.5
SAMD1-201ENST00000269724 PPRC1Q5VV67 1664 aaKnown RBP30.67■■■□□ 2.5
SAMD1-201ENST00000269724 ABCA9Q8IUA7 1624 aa30.65■■■□□ 2.5
SAMD1-201ENST00000269724 CD109Q6YHK3 1445 aa30.64■■■□□ 2.49
SAMD1-201ENST00000269724 TEX14Q8IWB6 1497 aa30.63■■■□□ 2.49
SAMD1-201ENST00000269724 MAGI3Q5TCQ9 1506 aa30.62■■■□□ 2.49
SAMD1-201ENST00000269724 TROQ12816 1431 aaPredicted RBP30.55■■■□□ 2.48
SAMD1-201ENST00000269724 VPS8Q8N3P4 1428 aa30.52■■■□□ 2.48
SAMD1-201ENST00000269724 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.51■■■□□ 2.471e-7■■□□□ 12.2
SAMD1-201ENST00000269724 KDM6BO15054 1643 aa30.5■■■□□ 2.47
SAMD1-201ENST00000269724 KIF14Q15058 1648 aa30.47■■■□□ 2.47
SAMD1-201ENST00000269724 PHLDB1Q86UU1 1377 aa30.45■■■□□ 2.47
SAMD1-201ENST00000269724 TTC37Q6PGP7 1564 aa30.45■■■□□ 2.46
SAMD1-201ENST00000269724 NEO1Q92859 1461 aa30.4■■■□□ 2.46
SAMD1-201ENST00000269724 ARAP3Q8WWN8 1544 aa30.37■■■□□ 2.45
SAMD1-201ENST00000269724 CFAP74Q9C0B2 1584 aa30.37■■■□□ 2.45
SAMD1-201ENST00000269724 PLCH2O75038 1416 aa30.36■■■□□ 2.45
SAMD1-201ENST00000269724 MYO5CQ9NQX4 1742 aa30.36■■■□□ 2.45
SAMD1-201ENST00000269724 COL17A1Q9UMD9 1497 aaPredicted RBP30.34■■■□□ 2.45
SAMD1-201ENST00000269724 MTUS2Q5JR59 1369 aa30.33■■■□□ 2.45
SAMD1-201ENST00000269724 MAP3K1Q13233 1512 aa30.32■■■□□ 2.44
SAMD1-201ENST00000269724 FANCAO15360 1455 aa30.31■■■□□ 2.44
SAMD1-201ENST00000269724 TIAM1Q13009 1591 aa30.31■■■□□ 2.44
SAMD1-201ENST00000269724 EHBP1L1Q8N3D4 1523 aa30.3■■■□□ 2.44
SAMD1-201ENST00000269724 AKNAQ7Z591 1439 aa30.25■■■□□ 2.43
SAMD1-201ENST00000269724 EFCAB2Q5VUJ9 269 aa30.24■■■□□ 2.43
SAMD1-201ENST00000269724 PREX2Q70Z35 1606 aa30.23■■■□□ 2.43
SAMD1-201ENST00000269724 CDC42BPAQ5VT25 1732 aa30.21■■■□□ 2.43
SAMD1-201ENST00000269724 CDC42BPBQ9Y5S2 1711 aa30.21■■■□□ 2.43
SAMD1-201ENST00000269724 ARHGAP5Q13017 1502 aa30.2■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 278 ms