RNA–Protein interactions for RNA: ENST00000269051.8

RHBDL3-201, Transcript of rhomboid like 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RHBDL3, Length 4,661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-201ENST00000269051 NBR1Q14596 966 aa16.4■□□□□ 0.22
RHBDL3-201ENST00000269051 ZNF777Q9ULD5 760 aaPredicted RBP16.4■□□□□ 0.22
RHBDL3-201ENST00000269051 WIZO95785 1651 aa16.4■□□□□ 0.22
RHBDL3-201ENST00000269051 TOP2AP11388 1531 aaKnown RBP16.36■□□□□ 0.21
RHBDL3-201ENST00000269051 PPP4R2Q9NY27 417 aa16.36■□□□□ 0.21
RHBDL3-201ENST00000269051 CANXP27824 592 aaKnown RBP16.36■□□□□ 0.21
RHBDL3-201ENST00000269051 RRP7BPQ9NSQ0 103 aa16.33■□□□□ 0.21
RHBDL3-201ENST00000269051 TSHZ2Q9NRE2 1034 aa16.33■□□□□ 0.2
RHBDL3-201ENST00000269051 SETD5Q9C0A6 1442 aa16.33■□□□□ 0.2
RHBDL3-201ENST00000269051 KANK4Q5T7N3 995 aaPredicted RBP16.33■□□□□ 0.2
RHBDL3-201ENST00000269051 RBM19Q9Y4C8 960 aaKnown RBP16.32■□□□□ 0.2
RHBDL3-201ENST00000269051 FHAD1B1AJZ9 1412 aa16.32■□□□□ 0.2
RHBDL3-201ENST00000269051 FBLN2P98095 1184 aa16.3■□□□□ 0.2
RHBDL3-201ENST00000269051 SALL2Q9Y467 1007 aaPredicted RBP16.28■□□□□ 0.2
RHBDL3-201ENST00000269051 RAB3GAP2Q9H2M9 1393 aa16.26■□□□□ 0.19
RHBDL3-201ENST00000269051 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.25■□□□□ 0.19
RHBDL3-201ENST00000269051 DHX57Q6P158 1386 aaKnown RBP16.25■□□□□ 0.19
RHBDL3-201ENST00000269051 ERICH6BQ5W0A0 696 aa16.24■□□□□ 0.19
RHBDL3-201ENST00000269051 BCL11AQ9H165 835 aa16.21■□□□□ 0.19
RHBDL3-201ENST00000269051 CARMIL1Q5VZK9 1371 aa16.21■□□□□ 0.19
RHBDL3-201ENST00000269051 UPF2Q9HAU5 1272 aaKnown RBP16.2■□□□□ 0.18
RHBDL3-201ENST00000269051 RUSC2Q8N2Y8 1516 aa16.19■□□□□ 0.18
RHBDL3-201ENST00000269051 EIF5BO60841 1220 aaKnown RBP16.19■□□□□ 0.18
RHBDL3-201ENST00000269051 TSPY4P0CV99 314 aa16.19■□□□□ 0.18
RHBDL3-201ENST00000269051 TSPY10P0CW01 314 aa16.19■□□□□ 0.18
RHBDL3-201ENST00000269051 DDRGK1Q96HY6 314 aa16.19■□□□□ 0.18
RHBDL3-201ENST00000269051 NOP58Q9Y2X3 529 aaKnown RBP16.19■□□□□ 0.18
RHBDL3-201ENST00000269051 PPP1R15AO75807 674 aaPredicted RBP16.18■□□□□ 0.18
RHBDL3-201ENST00000269051 KDM2AQ9Y2K7 1162 aa16.18■□□□□ 0.18
RHBDL3-201ENST00000269051 RAPGEF2Q9Y4G8 1499 aa16.17■□□□□ 0.18
RHBDL3-201ENST00000269051 B4GALNT3Q6L9W6 998 aa16.16■□□□□ 0.18
RHBDL3-201ENST00000269051 WDR43Q15061 677 aaKnown RBP eCLIP16.16■□□□□ 0.18
RHBDL3-201ENST00000269051 CUX2O14529 1486 aa16.16■□□□□ 0.18
RHBDL3-201ENST00000269051 ARHGAP35Q9NRY4 1499 aa16.15■□□□□ 0.18
RHBDL3-201ENST00000269051 PPM1GO15355 546 aaPredicted RBP16.13■□□□□ 0.17
RHBDL3-201ENST00000269051 SMARCA2P51531 1590 aa16.12■□□□□ 0.17
RHBDL3-201ENST00000269051 SMARCA4P51532 1647 aa16.1■□□□□ 0.17
RHBDL3-201ENST00000269051 NEFMP07197 916 aa16.1■□□□□ 0.17
RHBDL3-201ENST00000269051 HSPA5P11021 654 aaKnown RBP16.1■□□□□ 0.17
RHBDL3-201ENST00000269051 CARD11Q9BXL7 1154 aa16.07■□□□□ 0.16
RHBDL3-201ENST00000269051 KCNH8Q96L42 1107 aa16.06■□□□□ 0.16
RHBDL3-201ENST00000269051 DEKP35659 375 aaKnown RBP16.05■□□□□ 0.16
RHBDL3-201ENST00000269051 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.04■□□□□ 0.16
RHBDL3-201ENST00000269051 ANP32BQ92688 251 aaKnown RBP16.03■□□□□ 0.16
RHBDL3-201ENST00000269051 CFDP1Q9UEE9 299 aaPredicted RBP16.03■□□□□ 0.16
RHBDL3-201ENST00000269051 HSP90AA1P07900 732 aaKnown RBP16.01■□□□□ 0.15
RHBDL3-201ENST00000269051 SENP3-EIF4A1A0A087X0R7 540 aa16■□□□□ 0.15
RHBDL3-201ENST00000269051 BECN1Q14457 450 aa16■□□□□ 0.15
RHBDL3-201ENST00000269051 GLIPR1L2Q4G1C9 344 aa16■□□□□ 0.15
RHBDL3-201ENST00000269051 FMN1Q68DA7 1419 aa16■□□□□ 0.15
RHBDL3-201ENST00000269051 PLEKHD1A6NEE1 506 aa15.98■□□□□ 0.15
RHBDL3-201ENST00000269051 LAS1LQ9Y4W2 734 aaKnown RBP15.97■□□□□ 0.15
RHBDL3-201ENST00000269051 ATAD2BQ9ULI0 1458 aa15.95■□□□□ 0.14
RHBDL3-201ENST00000269051 CHMP7Q8WUX9 453 aaPredicted RBP15.95■□□□□ 0.14
RHBDL3-201ENST00000269051 KIF21BO75037 1637 aa15.94■□□□□ 0.14
RHBDL3-201ENST00000269051 CDCA8Q53HL2 280 aa15.94■□□□□ 0.14
RHBDL3-201ENST00000269051 MPHOSPH9Q99550 1183 aa15.94■□□□□ 0.14
RHBDL3-201ENST00000269051 RGL3Q3MIN7 710 aa15.94■□□□□ 0.14
RHBDL3-201ENST00000269051 KNSTRNQ9Y448 316 aa15.93■□□□□ 0.14
RHBDL3-201ENST00000269051 FANCIQ9NVI1 1328 aa15.92■□□□□ 0.14
RHBDL3-201ENST00000269051 CHGAP10645 457 aaKnown RBP15.9■□□□□ 0.14
RHBDL3-201ENST00000269051 NUDCQ9Y266 331 aa15.9■□□□□ 0.14
RHBDL3-201ENST00000269051 TCERG1O14776 1098 aaKnown RBP15.89■□□□□ 0.13
RHBDL3-201ENST00000269051 L3MBTL2Q969R5 705 aa15.89■□□□□ 0.13
RHBDL3-201ENST00000269051 IPO9Q96P70 1041 aaKnown RBP15.88■□□□□ 0.13
RHBDL3-201ENST00000269051 ARXQ96QS3 562 aa15.87■□□□□ 0.13
RHBDL3-201ENST00000269051 FHOD3Q2V2M9 1422 aa15.86■□□□□ 0.13
RHBDL3-201ENST00000269051 FOXD1Q16676 465 aa15.86■□□□□ 0.13
RHBDL3-201ENST00000269051 RALBP1Q15311 655 aa15.85■□□□□ 0.13
RHBDL3-201ENST00000269051 DCAF11Q8TEB1 546 aa15.85■□□□□ 0.13
RHBDL3-201ENST00000269051 RRBP1Q9P2E9 1410 aaKnown RBP15.84■□□□□ 0.13
RHBDL3-201ENST00000269051 RCAN3Q9UKA8 241 aa15.84■□□□□ 0.13
RHBDL3-201ENST00000269051 RGS3P49796 1198 aa15.83■□□□□ 0.13
RHBDL3-201ENST00000269051 RTN4Q9NQC3 1192 aaKnown RBP15.83■□□□□ 0.13
RHBDL3-201ENST00000269051 PRKRIP1Q9H875 184 aaPredicted RBP15.83■□□□□ 0.12
RHBDL3-201ENST00000269051 ZBED9Q6R2W3 1325 aa15.83■□□□□ 0.12
RHBDL3-201ENST00000269051 CC2D1BQ5T0F9 858 aaKnown RBP15.83■□□□□ 0.12
RHBDL3-201ENST00000269051 EIF4G1Q04637 1599 aaKnown RBP15.83■□□□□ 0.12
RHBDL3-201ENST00000269051 TMF1P82094 1093 aa15.81■□□□□ 0.12
RHBDL3-201ENST00000269051 PKD2Q13563 968 aa15.81■□□□□ 0.12
RHBDL3-201ENST00000269051 KTN1Q86UP2 1357 aaKnown RBP15.8■□□□□ 0.12
RHBDL3-201ENST00000269051 CCDC18Q5T9S5 1454 aa15.8■□□□□ 0.12
RHBDL3-201ENST00000269051 ERICH3Q5RHP9 1530 aa15.79■□□□□ 0.12
RHBDL3-201ENST00000269051 ROCK2O75116 1388 aaKnown RBP15.79■□□□□ 0.12
RHBDL3-201ENST00000269051 CADPSQ9ULU8 1353 aa15.78■□□□□ 0.12
RHBDL3-201ENST00000269051 PDE3BQ13370 1112 aa15.78■□□□□ 0.12
RHBDL3-201ENST00000269051 TRIM44Q96DX7 344 aaPredicted RBP15.77■□□□□ 0.12
RHBDL3-201ENST00000269051 CFAP53Q96M91 514 aa15.77■□□□□ 0.12
RHBDL3-201ENST00000269051 SLC24A1O60721 1099 aa15.76■□□□□ 0.11
RHBDL3-201ENST00000269051 IGF1RP08069 1367 aa15.75■□□□□ 0.11
RHBDL3-201ENST00000269051 PHLDB1Q86UU1 1377 aa15.74■□□□□ 0.11
RHBDL3-201ENST00000269051 LRRC9Q6ZRR7 1453 aa15.74■□□□□ 0.11
RHBDL3-201ENST00000269051 GOLGA6L22H0YM25 854 aa15.74■□□□□ 0.11
RHBDL3-201ENST00000269051 MYH16Q9H6N6 1097 aa15.74■□□□□ 0.11
RHBDL3-201ENST00000269051 ARAP1Q96P48 1450 aa15.74■□□□□ 0.11
RHBDL3-201ENST00000269051 USP35Q9P2H5 1018 aa15.73■□□□□ 0.11
RHBDL3-201ENST00000269051 SYNJ1O43426 1573 aa15.73■□□□□ 0.11
RHBDL3-201ENST00000269051 UACAQ9BZF9 1416 aa15.73■□□□□ 0.11
RHBDL3-201ENST00000269051 NLRP13Q86W25 1043 aa15.73■□□□□ 0.11
RHBDL3-201ENST00000269051 TDRD9Q8NDG6 1382 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms