RNA–Protein interactions for RNA: ENST00000268896.9

PCTP-201, Transcript of phosphatidylcholine transfer protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCTP, Length 2,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-201ENST00000268896 ARHGAP35Q9NRY4 1499 aa25.37■■□□□ 1.65
PCTP-201ENST00000268896 ARAP1Q96P48 1450 aa25.36■■□□□ 1.65
PCTP-201ENST00000268896 CHMP7Q8WUX9 453 aaPredicted RBP25.34■■□□□ 1.65
PCTP-201ENST00000268896 P3H3Q8IVL6 736 aa25.34■■□□□ 1.65
PCTP-201ENST00000268896 VPS8Q8N3P4 1428 aa25.32■■□□□ 1.64
PCTP-201ENST00000268896 GRIN2AQ12879 1464 aa25.31■■□□□ 1.64
PCTP-201ENST00000268896 SYNJ2O15056 1496 aa25.31■■□□□ 1.64
PCTP-201ENST00000268896 TTBK1Q5TCY1 1321 aaPredicted RBP25.28■■□□□ 1.64
PCTP-201ENST00000268896 FHOD3Q2V2M9 1422 aa25.22■■□□□ 1.63
PCTP-201ENST00000268896 IQGAP2Q13576 1575 aa25.21■■□□□ 1.63
PCTP-201ENST00000268896 PCGF6Q9BYE7 350 aa25.19■■□□□ 1.62
PCTP-201ENST00000268896 CEP170Q5SW79 1584 aa25.18■■□□□ 1.62
PCTP-201ENST00000268896 EFCAB5A4FU69 1503 aa25.18■■□□□ 1.62
PCTP-201ENST00000268896 KIAA0586Q9BVV6 1533 aa25.14■■□□□ 1.62
PCTP-201ENST00000268896 APLP2Q06481 763 aa25.14■■□□□ 1.62
PCTP-201ENST00000268896 CHD1O14646 1710 aa25.13■■□□□ 1.61
PCTP-201ENST00000268896 SAMD9Q5K651 1589 aa25.12■■□□□ 1.61
PCTP-201ENST00000268896 TRIM26Q12899 539 aaPredicted RBP25.1■■□□□ 1.61
PCTP-201ENST00000268896 NUP160Q12769 1436 aa25.09■■□□□ 1.61
PCTP-201ENST00000268896 ATP1B4Q9UN42 357 aaPredicted RBP25.08■■□□□ 1.61
PCTP-201ENST00000268896 UGGT2Q9NYU1 1516 aa25.04■■□□□ 1.6
PCTP-201ENST00000268896 PCF11O94913 1555 aaKnown RBP25.03■■□□□ 1.6
PCTP-201ENST00000268896 FMN1Q68DA7 1419 aa24.98■■□□□ 1.59
PCTP-201ENST00000268896 DISP1Q96F81 1524 aa24.98■■□□□ 1.59
PCTP-201ENST00000268896 JPH4Q96JJ6 628 aa24.98■■□□□ 1.59
PCTP-201ENST00000268896 KIAA0556O60303 1618 aa24.96■■□□□ 1.59
PCTP-201ENST00000268896 KANK4Q5T7N3 995 aaPredicted RBP24.96■■□□□ 1.59
PCTP-201ENST00000268896 CASKIN1Q8WXD9 1431 aa24.92■■□□□ 1.58
PCTP-201ENST00000268896 FYCO1Q9BQS8 1478 aa24.91■■□□□ 1.58
PCTP-201ENST00000268896 TIAM1Q13009 1591 aa24.87■■□□□ 1.57
PCTP-201ENST00000268896 CARMIL2Q6F5E8 1435 aa24.86■■□□□ 1.57
PCTP-201ENST00000268896 PRG4Q92954 1404 aaPredicted RBP24.83■■□□□ 1.57
PCTP-201ENST00000268896 ARID3CA6NKF2 412 aa24.83■■□□□ 1.56
PCTP-201ENST00000268896 CFAP43Q8NDM7 1665 aa24.81■■□□□ 1.56
PCTP-201ENST00000268896 LRRIQ1Q96JM4 1722 aa24.8■■□□□ 1.56
PCTP-201ENST00000268896 MAP3K1Q13233 1512 aa24.79■■□□□ 1.56
PCTP-201ENST00000268896 LRRC9Q6ZRR7 1453 aa24.77■■□□□ 1.56
PCTP-201ENST00000268896 CLASP1Q7Z460 1538 aa24.76■■□□□ 1.55
PCTP-201ENST00000268896 HECW1Q76N89 1606 aa24.76■■□□□ 1.55
PCTP-201ENST00000268896 SHROOM2Q13796 1616 aa24.74■■□□□ 1.55
PCTP-201ENST00000268896 ERCC6L2Q5T890 1561 aa24.72■■□□□ 1.55
PCTP-201ENST00000268896 PLB1Q6P1J6 1458 aa24.71■■□□□ 1.55
PCTP-201ENST00000268896 RAPGEF6Q8TEU7 1601 aa24.71■■□□□ 1.55
PCTP-201ENST00000268896 CDK13Q14004 1512 aaKnown RBP24.7■■□□□ 1.54
PCTP-201ENST00000268896 EPRSP07814 1512 aaKnown RBP24.68■■□□□ 1.54
PCTP-201ENST00000268896 MTUS2Q5JR59 1369 aa24.66■■□□□ 1.54
PCTP-201ENST00000268896 CCDC18Q5T9S5 1454 aa24.66■■□□□ 1.54
PCTP-201ENST00000268896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.66■■□□□ 1.54
PCTP-201ENST00000268896 HNRNPUL2Q1KMD3 747 aaKnown RBP24.66■■□□□ 1.54
PCTP-201ENST00000268896 NUP153P49790 1475 aaKnown RBP24.65■■□□□ 1.54
PCTP-201ENST00000268896 PTPRGP23470 1445 aa24.65■■□□□ 1.54
PCTP-201ENST00000268896 OSCARQ8IYS5 282 aa24.64■■□□□ 1.53
PCTP-201ENST00000268896 MAGI3Q5TCQ9 1506 aa24.6■■□□□ 1.53
PCTP-201ENST00000268896 PHLDB1Q86UU1 1377 aa24.59■■□□□ 1.53
PCTP-201ENST00000268896 ABCA8O94911 1581 aa24.58■■□□□ 1.53
PCTP-201ENST00000268896 EHBP1L1Q8N3D4 1523 aa24.55■■□□□ 1.52
PCTP-201ENST00000268896 RRBP1Q9P2E9 1410 aaKnown RBP24.51■■□□□ 1.51
PCTP-201ENST00000268896 SUPT6HQ7KZ85 1726 aaKnown RBP24.5■■□□□ 1.51
PCTP-201ENST00000268896 CCNB3Q8WWL7 1395 aa24.5■■□□□ 1.51
PCTP-201ENST00000268896 NCOA2Q15596 1464 aa24.5■■□□□ 1.51
PCTP-201ENST00000268896 UACAQ9BZF9 1416 aa24.49■■□□□ 1.51
PCTP-201ENST00000268896 ITGAEP38570 1179 aa24.46■■□□□ 1.51
PCTP-201ENST00000268896 CDK11AQ9UQ88 783 aaPredicted RBP24.46■■□□□ 1.51
PCTP-201ENST00000268896 ATP10BO94823 1461 aa24.46■■□□□ 1.51
PCTP-201ENST00000268896 FAM50AQ14320 339 aaKnown RBP24.45■■□□□ 1.5
PCTP-201ENST00000268896 ABCC2Q92887 1545 aa24.4■■□□□ 1.5
PCTP-201ENST00000268896 ARHGEF11O15085 1522 aa24.38■■□□□ 1.49
PCTP-201ENST00000268896 TROQ12816 1431 aaPredicted RBP24.38■■□□□ 1.49
PCTP-201ENST00000268896 PLEKHD1A6NEE1 506 aa24.37■■□□□ 1.49
PCTP-201ENST00000268896 MYOM3Q5VTT5 1437 aa24.37■■□□□ 1.49
PCTP-201ENST00000268896 FGD6Q6ZV73 1430 aa24.37■■□□□ 1.49
PCTP-201ENST00000268896 HRCP23327 699 aa24.37■■□□□ 1.49
PCTP-201ENST00000268896 KIF14Q15058 1648 aa24.34■■□□□ 1.49
PCTP-201ENST00000268896 UHRF1BP1LA0JNW5 1464 aa24.28■■□□□ 1.48
PCTP-201ENST00000268896 ZCCHC11Q5TAX3 1644 aaKnown RBP24.27■■□□□ 1.48
PCTP-201ENST00000268896 ADCY10Q96PN6 1610 aa24.27■■□□□ 1.48
PCTP-201ENST00000268896 PTPN23Q9H3S7 1636 aa24.27■■□□□ 1.48
PCTP-201ENST00000268896 KDM5BQ9UGL1 1544 aa24.23■■□□□ 1.47
PCTP-201ENST00000268896 CCER1Q8TC90 406 aaPredicted RBP24.21■■□□□ 1.47
PCTP-201ENST00000268896 KCNH8Q96L42 1107 aa24.21■■□□□ 1.47
PCTP-201ENST00000268896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.2■■□□□ 1.46
PCTP-201ENST00000268896 MIA2Q96PC5 1412 aa24.18■■□□□ 1.46
PCTP-201ENST00000268896 GPATCH8Q9UKJ3 1502 aaKnown RBP24.18■■□□□ 1.46
PCTP-201ENST00000268896 ZNF644Q9H582 1327 aaPredicted RBP24.17■■□□□ 1.46
PCTP-201ENST00000268896 CFDP1Q9UEE9 299 aaPredicted RBP24.17■■□□□ 1.46
PCTP-201ENST00000268896 ZNF777Q9ULD5 760 aaPredicted RBP24.17■■□□□ 1.46
PCTP-201ENST00000268896 ABCC10Q5T3U5 1492 aa24.17■■□□□ 1.46
PCTP-201ENST00000268896 TCOF1Q13428 1488 aaKnown RBP24.17■■□□□ 1.46
PCTP-201ENST00000268896 ITSN2Q9NZM3 1697 aa24.16■■□□□ 1.46
PCTP-201ENST00000268896 CDC42BPAQ5VT25 1732 aa24.13■■□□□ 1.45
PCTP-201ENST00000268896 PTPRKQ15262 1439 aa24.13■■□□□ 1.45
PCTP-201ENST00000268896 RIMBP3CA6NJZ7 1639 aa24.12■■□□□ 1.45
PCTP-201ENST00000268896 RIMBP3BA6NNM3 1639 aa24.12■■□□□ 1.45
PCTP-201ENST00000268896 RIMBP3Q9UFD9 1639 aa24.12■■□□□ 1.45
PCTP-201ENST00000268896 CYB5RLQ6IPT4 315 aa24.11■■□□□ 1.45
PCTP-201ENST00000268896 TTC37Q6PGP7 1564 aa24.1■■□□□ 1.45
PCTP-201ENST00000268896 CHIC2Q9UKJ5 165 aa24.1■■□□□ 1.45
PCTP-201ENST00000268896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.09■■□□□ 1.45
PCTP-201ENST00000268896 NPM1P06748 294 aaKnown RBP eCLIP24.09■■□□□ 1.45
PCTP-201ENST00000268896 CAMSAP2Q08AD1 1489 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms