RNA–Protein interactions for RNA: ENST00000267163.4

RB1-201, Transcript of RB transcriptional corepressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RB1, Length 4,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-201ENST00000267163 DIEXFQ68CQ4 756 aaKnown RBP18.48■□□□□ 0.55
RB1-201ENST00000267163 ANP32CO43423 234 aa18.47■□□□□ 0.55
RB1-201ENST00000267163 PLEKHG5O94827 1062 aa18.47■□□□□ 0.55
RB1-201ENST00000267163 CEP164Q9UPV0 1460 aa18.45■□□□□ 0.54
RB1-201ENST00000267163 CEP162Q5TB80 1403 aa18.43■□□□□ 0.54
RB1-201ENST00000267163 CYB5RLQ6IPT4 315 aa18.42■□□□□ 0.54
RB1-201ENST00000267163 RGL3Q3MIN7 710 aa18.41■□□□□ 0.54
RB1-201ENST00000267163 CARMIL2Q6F5E8 1435 aa18.39■□□□□ 0.54
RB1-201ENST00000267163 OSCARQ8IYS5 282 aa18.38■□□□□ 0.53
RB1-201ENST00000267163 WIZO95785 1651 aa18.35■□□□□ 0.53
RB1-201ENST00000267163 TNIKQ9UKE5 1360 aa18.34■□□□□ 0.53
RB1-201ENST00000267163 JPH4Q96JJ6 628 aa18.33■□□□□ 0.53
RB1-201ENST00000267163 CCNB3Q8WWL7 1395 aa18.33■□□□□ 0.52
RB1-201ENST00000267163 CLSPNQ9HAW4 1339 aa18.33■□□□□ 0.52
RB1-201ENST00000267163 ABCC8Q09428 1581 aa18.32■□□□□ 0.52
RB1-201ENST00000267163 FANCD2Q9BXW9 1451 aa18.32■□□□□ 0.52
RB1-201ENST00000267163 A0A0G2JS52 829 aa18.31■□□□□ 0.52
RB1-201ENST00000267163 BCL11AQ9H165 835 aa18.31■□□□□ 0.52
RB1-201ENST00000267163 TOP2AP11388 1531 aaKnown RBP18.3■□□□□ 0.52
RB1-201ENST00000267163 GGT6Q6P531 493 aa18.28■□□□□ 0.52
RB1-201ENST00000267163 ZBTB7CA1YPR0 619 aa18.28■□□□□ 0.52
RB1-201ENST00000267163 SMARCA4P51532 1647 aa18.27■□□□□ 0.52
RB1-201ENST00000267163 ZNF316A6NFI3 1004 aaPredicted RBP18.26■□□□□ 0.51
RB1-201ENST00000267163 FHAD1B1AJZ9 1412 aa18.25■□□□□ 0.51
RB1-201ENST00000267163 DAXXQ9UER7 740 aaPredicted RBP18.25■□□□□ 0.51
RB1-201ENST00000267163 HAP1P54257 671 aaPredicted RBP18.25■□□□□ 0.51
RB1-201ENST00000267163 CANXP27824 592 aaKnown RBP18.22■□□□□ 0.51
RB1-201ENST00000267163 ZBTB47Q9UFB7 747 aaPredicted RBP18.22■□□□□ 0.51
RB1-201ENST00000267163 EFCAB2Q5VUJ9 269 aa18.21■□□□□ 0.51
RB1-201ENST00000267163 DNAJC5BQ9UF47 199 aa18.2■□□□□ 0.5
RB1-201ENST00000267163 TMC1Q8TDI8 760 aa18.19■□□□□ 0.5
RB1-201ENST00000267163 LMOD2Q6P5Q4 547 aa18.17■□□□□ 0.5
RB1-201ENST00000267163 DDX10Q13206 875 aaKnown RBP18.14■□□□□ 0.49
RB1-201ENST00000267163 NCAPD3P42695 1498 aa18.14■□□□□ 0.49
RB1-201ENST00000267163 GTF3C3Q9Y5Q9 886 aa18.14■□□□□ 0.49
RB1-201ENST00000267163 HIRIP3Q9BW71 556 aaPredicted RBP18.13■□□□□ 0.49
RB1-201ENST00000267163 POGKQ9P215 609 aa18.11■□□□□ 0.49
RB1-201ENST00000267163 KANK1Q14678 1352 aa18.1■□□□□ 0.49
RB1-201ENST00000267163 SALL2Q9Y467 1007 aaPredicted RBP18.09■□□□□ 0.49
RB1-201ENST00000267163 ACIN1Q9UKV3 1341 aaKnown RBP18.07■□□□□ 0.48
RB1-201ENST00000267163 PTPRGP23470 1445 aa18.07■□□□□ 0.48
RB1-201ENST00000267163 HDGFP51858 240 aaKnown RBP18.07■□□□□ 0.48
RB1-201ENST00000267163 RAPGEF2Q9Y4G8 1499 aa18.06■□□□□ 0.48
RB1-201ENST00000267163 EIF4G2P78344 907 aaKnown RBP eCLIP18.05■□□□□ 0.48
RB1-201ENST00000267163 FMN1Q68DA7 1419 aa18.04■□□□□ 0.48
RB1-201ENST00000267163 KIF3BO15066 747 aa18.03■□□□□ 0.48
RB1-201ENST00000267163 NPM2Q86SE8 214 aaKnown RBP18.02■□□□□ 0.48
RB1-201ENST00000267163 FAM9BQ8IZU0 186 aa18.02■□□□□ 0.48
RB1-201ENST00000267163 RAD54L2Q9Y4B4 1467 aa18.02■□□□□ 0.47
RB1-201ENST00000267163 FHOD3Q2V2M9 1422 aa18.02■□□□□ 0.47
RB1-201ENST00000267163 HNRNPMP52272 730 aaKnown RBP eCLIP18.01■□□□□ 0.47
RB1-201ENST00000267163 AQRO60306 1485 aaKnown RBP eCLIP18.01■□□□□ 0.47
RB1-201ENST00000267163 KANK4Q5T7N3 995 aaPredicted RBP18■□□□□ 0.47
RB1-201ENST00000267163 FAM69CQ0P6D2 419 aa18■□□□□ 0.47
RB1-201ENST00000267163 CARD11Q9BXL7 1154 aa18■□□□□ 0.47
RB1-201ENST00000267163 NESP48681 1621 aa18■□□□□ 0.47
RB1-201ENST00000267163 PPM1GO15355 546 aaPredicted RBP17.99■□□□□ 0.47
RB1-201ENST00000267163 CC2D2AQ9P2K1 1620 aa17.98■□□□□ 0.47
RB1-201ENST00000267163 GAPVD1Q14C86 1478 aa17.98■□□□□ 0.47
RB1-201ENST00000267163 WDR43Q15061 677 aaKnown RBP eCLIP17.98■□□□□ 0.47
RB1-201ENST00000267163 FGD5Q6ZNL6 1462 aa17.98■□□□□ 0.47
RB1-201ENST00000267163 SPAG9O60271 1321 aaKnown RBP17.97■□□□□ 0.47
RB1-201ENST00000267163 SAFB2Q14151 953 aaKnown RBP eCLIP17.95■□□□□ 0.46
RB1-201ENST00000267163 DCAF11Q8TEB1 546 aa17.95■□□□□ 0.46
RB1-201ENST00000267163 SIN3AQ96ST3 1273 aa17.94■□□□□ 0.46
RB1-201ENST00000267163 AEBP2Q6ZN18 517 aaPredicted RBP17.93■□□□□ 0.46
RB1-201ENST00000267163 CDCA8Q53HL2 280 aa17.92■□□□□ 0.46
RB1-201ENST00000267163 VPS8Q8N3P4 1428 aa17.92■□□□□ 0.46
RB1-201ENST00000267163 STK26Q9P289 416 aa17.92■□□□□ 0.46
RB1-201ENST00000267163 WASHC2CQ9Y4E1 1318 aa17.91■□□□□ 0.46
RB1-201ENST00000267163 PKD2Q13563 968 aa17.91■□□□□ 0.46
RB1-201ENST00000267163 ARHGAP35Q9NRY4 1499 aa17.9■□□□□ 0.46
RB1-201ENST00000267163 HNRNPUQ00839 825 aaKnown RBP eCLIP17.89■□□□□ 0.45
RB1-201ENST00000267163 MRS2Q9HD23 443 aa17.88■□□□□ 0.45
RB1-201ENST00000267163 KNSTRNQ9Y448 316 aa17.87■□□□□ 0.45
RB1-201ENST00000267163 SOX12O15370 315 aa17.86■□□□□ 0.45
RB1-201ENST00000267163 IGF1RP08069 1367 aa17.86■□□□□ 0.45
RB1-201ENST00000267163 FOXD1Q16676 465 aa17.86■□□□□ 0.45
RB1-201ENST00000267163 NUP155O75694 1391 aa17.85■□□□□ 0.45
RB1-201ENST00000267163 RUSC2Q8N2Y8 1516 aa17.84■□□□□ 0.45
RB1-201ENST00000267163 SRPK2P78362 688 aaKnown RBP17.84■□□□□ 0.45
RB1-201ENST00000267163 ARXQ96QS3 562 aa17.84■□□□□ 0.45
RB1-201ENST00000267163 RSPH4AQ5TD94 716 aa17.84■□□□□ 0.45
RB1-201ENST00000267163 ANKRD30AQ9BXX3 1397 aa17.84■□□□□ 0.45
RB1-201ENST00000267163 EID1Q9Y6B2 187 aa17.83■□□□□ 0.44
RB1-201ENST00000267163 TNNT2P45379 298 aaPredicted RBP17.82■□□□□ 0.44
RB1-201ENST00000267163 CFAP53Q96M91 514 aa17.81■□□□□ 0.44
RB1-201ENST00000267163 MRC2Q9UBG0 1479 aa17.81■□□□□ 0.44
RB1-201ENST00000267163 NUTM2DQ5VT03 806 aaPredicted RBP17.81■□□□□ 0.44
RB1-201ENST00000267163 CCDC18Q5T9S5 1454 aa17.79■□□□□ 0.44
RB1-201ENST00000267163 CFTRP13569 1480 aa17.78■□□□□ 0.44
RB1-201ENST00000267163 GRIN2BQ13224 1484 aa17.76■□□□□ 0.43
RB1-201ENST00000267163 PAK3O75914 559 aaPredicted RBP17.74■□□□□ 0.43
RB1-201ENST00000267163 RTL5Q5HYW3 569 aaPredicted RBP17.74■□□□□ 0.43
RB1-201ENST00000267163 SENP3-EIF4A1A0A087X0R7 540 aa17.73■□□□□ 0.43
RB1-201ENST00000267163 MPHOSPH9Q99550 1183 aa17.72■□□□□ 0.43
RB1-201ENST00000267163 TMF1P82094 1093 aa17.7■□□□□ 0.42
RB1-201ENST00000267163 NEUROD2Q15784 382 aa17.69■□□□□ 0.42
RB1-201ENST00000267163 SETD5Q9C0A6 1442 aa17.69■□□□□ 0.42
RB1-201ENST00000267163 IFT140Q96RY7 1462 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms