RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 FHAD1B1AJZ9 1412 aa19.61■□□□□ 0.73
PRPF6-201ENST00000266079 CEP162Q5TB80 1403 aa19.61■□□□□ 0.73
PRPF6-201ENST00000266079 CUL7Q14999 1698 aa19.6■□□□□ 0.73
PRPF6-201ENST00000266079 P3H3Q8IVL6 736 aa19.59■□□□□ 0.73
PRPF6-201ENST00000266079 ADAMTS12P58397 1594 aa19.57■□□□□ 0.72
PRPF6-201ENST00000266079 MAGI1Q96QZ7 1491 aaPredicted RBP19.54■□□□□ 0.72
PRPF6-201ENST00000266079 CLIP1P30622 1438 aa19.53■□□□□ 0.72
PRPF6-201ENST00000266079 TTBK1Q5TCY1 1321 aaPredicted RBP19.52■□□□□ 0.72
PRPF6-201ENST00000266079 SYNJ2O15056 1496 aa19.51■□□□□ 0.71
PRPF6-201ENST00000266079 GRIN2AQ12879 1464 aa19.5■□□□□ 0.71
PRPF6-201ENST00000266079 ATP1B4Q9UN42 357 aaPredicted RBP19.39■□□□□ 0.69
PRPF6-201ENST00000266079 CEP170Q5SW79 1584 aa19.38■□□□□ 0.69
PRPF6-201ENST00000266079 CHD1O14646 1710 aa19.38■□□□□ 0.69
PRPF6-201ENST00000266079 ARHGAP35Q9NRY4 1499 aa19.38■□□□□ 0.69
PRPF6-201ENST00000266079 CTTNBP2Q8WZ74 1663 aa19.37■□□□□ 0.69
PRPF6-201ENST00000266079 FHOD3Q2V2M9 1422 aa19.36■□□□□ 0.69
PRPF6-201ENST00000266079 ARAP1Q96P48 1450 aa19.36■□□□□ 0.69
PRPF6-201ENST00000266079 MYT1Q01538 1121 aa19.35■□□□□ 0.69
PRPF6-201ENST00000266079 JPH4Q96JJ6 628 aa19.34■□□□□ 0.69
PRPF6-201ENST00000266079 IQGAP2Q13576 1575 aa19.33■□□□□ 0.68
PRPF6-201ENST00000266079 KIAA0586Q9BVV6 1533 aa19.33■□□□□ 0.68
PRPF6-201ENST00000266079 NUP160Q12769 1436 aa19.32■□□□□ 0.68
PRPF6-201ENST00000266079 ARID3CA6NKF2 412 aa19.29■□□□□ 0.68
PRPF6-201ENST00000266079 VPS8Q8N3P4 1428 aa19.25■□□□□ 0.67
PRPF6-201ENST00000266079 OSCARQ8IYS5 282 aa19.25■□□□□ 0.67
PRPF6-201ENST00000266079 APLP2Q06481 763 aa19.22■□□□□ 0.67
PRPF6-201ENST00000266079 PRG4Q92954 1404 aaPredicted RBP19.2■□□□□ 0.66
PRPF6-201ENST00000266079 ACIN1Q9UKV3 1341 aaKnown RBP19.2■□□□□ 0.66
PRPF6-201ENST00000266079 DISP1Q96F81 1524 aa19.19■□□□□ 0.66
PRPF6-201ENST00000266079 EFCAB5A4FU69 1503 aa19.17■□□□□ 0.66
PRPF6-201ENST00000266079 UGGT2Q9NYU1 1516 aa19.17■□□□□ 0.66
PRPF6-201ENST00000266079 SAMD9Q5K651 1589 aa19.16■□□□□ 0.66
PRPF6-201ENST00000266079 CARMIL2Q6F5E8 1435 aa19.14■□□□□ 0.65
PRPF6-201ENST00000266079 ERCC6L2Q5T890 1561 aa19.13■□□□□ 0.65
PRPF6-201ENST00000266079 KIAA0556O60303 1618 aa19.12■□□□□ 0.65
PRPF6-201ENST00000266079 KANK4Q5T7N3 995 aaPredicted RBP19.11■□□□□ 0.65
PRPF6-201ENST00000266079 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.11■□□□□ 0.65
PRPF6-201ENST00000266079 HNRNPUL2Q1KMD3 747 aaKnown RBP19.11■□□□□ 0.65
PRPF6-201ENST00000266079 NEUROD1Q13562 356 aa19.1■□□□□ 0.65
PRPF6-201ENST00000266079 FMN1Q68DA7 1419 aa19.1■□□□□ 0.65
PRPF6-201ENST00000266079 CLASP1Q7Z460 1538 aa19.09■□□□□ 0.65
PRPF6-201ENST00000266079 PCF11O94913 1555 aaKnown RBP19.09■□□□□ 0.65
PRPF6-201ENST00000266079 PLB1Q6P1J6 1458 aa19.05■□□□□ 0.64
PRPF6-201ENST00000266079 PTPRGP23470 1445 aa19.05■□□□□ 0.64
PRPF6-201ENST00000266079 CASKIN1Q8WXD9 1431 aa19.02■□□□□ 0.64
PRPF6-201ENST00000266079 SHROOM2Q13796 1616 aa18.99■□□□□ 0.63
PRPF6-201ENST00000266079 GTF3C3Q9Y5Q9 886 aa18.99■□□□□ 0.63
PRPF6-201ENST00000266079 FYCO1Q9BQS8 1478 aa18.98■□□□□ 0.63
PRPF6-201ENST00000266079 CENPBP07199 599 aaPredicted RBP18.97■□□□□ 0.63
PRPF6-201ENST00000266079 CDK13Q14004 1512 aaKnown RBP18.97■□□□□ 0.63
PRPF6-201ENST00000266079 NUP153P49790 1475 aaKnown RBP18.92■□□□□ 0.62
PRPF6-201ENST00000266079 MTUS2Q5JR59 1369 aa18.92■□□□□ 0.62
PRPF6-201ENST00000266079 TIAM1Q13009 1591 aa18.91■□□□□ 0.62
PRPF6-201ENST00000266079 CYB5RLQ6IPT4 315 aa18.91■□□□□ 0.62
PRPF6-201ENST00000266079 RAPGEF6Q8TEU7 1601 aa18.9■□□□□ 0.62
PRPF6-201ENST00000266079 EPRSP07814 1512 aaKnown RBP18.9■□□□□ 0.62
PRPF6-201ENST00000266079 LRRIQ1Q96JM4 1722 aa18.89■□□□□ 0.61
PRPF6-201ENST00000266079 HECW1Q76N89 1606 aa18.88■□□□□ 0.61
PRPF6-201ENST00000266079 UACAQ9BZF9 1416 aa18.88■□□□□ 0.61
PRPF6-201ENST00000266079 LRRC9Q6ZRR7 1453 aa18.87■□□□□ 0.61
PRPF6-201ENST00000266079 DIEXFQ68CQ4 756 aaKnown RBP18.86■□□□□ 0.61
PRPF6-201ENST00000266079 ARHGEF11O15085 1522 aa18.85■□□□□ 0.61
PRPF6-201ENST00000266079 ABCA8O94911 1581 aa18.84■□□□□ 0.61
PRPF6-201ENST00000266079 CCER1Q8TC90 406 aaPredicted RBP18.83■□□□□ 0.6
PRPF6-201ENST00000266079 MAGI3Q5TCQ9 1506 aa18.82■□□□□ 0.6
PRPF6-201ENST00000266079 KCNH8Q96L42 1107 aa18.82■□□□□ 0.6
PRPF6-201ENST00000266079 ATP10BO94823 1461 aa18.81■□□□□ 0.6
PRPF6-201ENST00000266079 CDK11AQ9UQ88 783 aaPredicted RBP18.81■□□□□ 0.6
PRPF6-201ENST00000266079 CCDC18Q5T9S5 1454 aa18.81■□□□□ 0.6
PRPF6-201ENST00000266079 ITGAEP38570 1179 aa18.81■□□□□ 0.6
PRPF6-201ENST00000266079 PLEKHD1A6NEE1 506 aa18.8■□□□□ 0.6
PRPF6-201ENST00000266079 CFAP43Q8NDM7 1665 aa18.8■□□□□ 0.6
PRPF6-201ENST00000266079 PHLDB1Q86UU1 1377 aa18.78■□□□□ 0.6
PRPF6-201ENST00000266079 MAP3K1Q13233 1512 aa18.77■□□□□ 0.6
PRPF6-201ENST00000266079 ABCC2Q92887 1545 aa18.76■□□□□ 0.59
PRPF6-201ENST00000266079 FAM50AQ14320 339 aaKnown RBP18.76■□□□□ 0.59
PRPF6-201ENST00000266079 RIMBP3CA6NJZ7 1639 aa18.74■□□□□ 0.59
PRPF6-201ENST00000266079 RIMBP3BA6NNM3 1639 aa18.74■□□□□ 0.59
PRPF6-201ENST00000266079 RIMBP3Q9UFD9 1639 aa18.74■□□□□ 0.59
PRPF6-201ENST00000266079 NPM1P06748 294 aaKnown RBP eCLIP18.73■□□□□ 0.59
PRPF6-201ENST00000266079 NCOA2Q15596 1464 aa18.72■□□□□ 0.59
PRPF6-201ENST00000266079 ADCY10Q96PN6 1610 aa18.71■□□□□ 0.59
PRPF6-201ENST00000266079 EHBP1L1Q8N3D4 1523 aa18.7■□□□□ 0.58
PRPF6-201ENST00000266079 ZNF777Q9ULD5 760 aaPredicted RBP18.69■□□□□ 0.58
PRPF6-201ENST00000266079 TROQ12816 1431 aaPredicted RBP18.69■□□□□ 0.58
PRPF6-201ENST00000266079 KIF14Q15058 1648 aa18.65■□□□□ 0.58
PRPF6-201ENST00000266079 ZCCHC11Q5TAX3 1644 aaKnown RBP18.65■□□□□ 0.58
PRPF6-201ENST00000266079 CCNB3Q8WWL7 1395 aa18.65■□□□□ 0.58
PRPF6-201ENST00000266079 UHRF1BP1LA0JNW5 1464 aa18.65■□□□□ 0.58
PRPF6-201ENST00000266079 KDM5BQ9UGL1 1544 aa18.65■□□□□ 0.58
PRPF6-201ENST00000266079 SUPT6HQ7KZ85 1726 aaKnown RBP18.64■□□□□ 0.57
PRPF6-201ENST00000266079 ZNF644Q9H582 1327 aaPredicted RBP18.64■□□□□ 0.57
PRPF6-201ENST00000266079 CFDP1Q9UEE9 299 aaPredicted RBP18.61■□□□□ 0.57
PRPF6-201ENST00000266079 MYOM3Q5VTT5 1437 aa18.6■□□□□ 0.57
PRPF6-201ENST00000266079 FGD6Q6ZV73 1430 aa18.59■□□□□ 0.57
PRPF6-201ENST00000266079 ASXL2Q76L83 1435 aa18.59■□□□□ 0.57
PRPF6-201ENST00000266079 RRBP1Q9P2E9 1410 aaKnown RBP18.58■□□□□ 0.56
PRPF6-201ENST00000266079 CHIC2Q9UKJ5 165 aa18.55■□□□□ 0.56
PRPF6-201ENST00000266079 WDR7Q9Y4E6 1490 aa18.54■□□□□ 0.56
PRPF6-201ENST00000266079 ZNF316A6NFI3 1004 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms