RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 TSPY10P0CW01 314 aa20.7■□□□□ 0.9
PDLIM2-201ENST00000265810 KANK4Q5T7N3 995 aaPredicted RBP20.7■□□□□ 0.9
PDLIM2-201ENST00000265810 CUX1P39880 1505 aa20.68■□□□□ 0.9
PDLIM2-201ENST00000265810 AQRO60306 1485 aaKnown RBP eCLIP20.66■□□□□ 0.9
PDLIM2-201ENST00000265810 RRP7BPQ9NSQ0 103 aa20.66■□□□□ 0.9
PDLIM2-201ENST00000265810 CFDP1Q9UEE9 299 aaPredicted RBP20.65■□□□□ 0.9
PDLIM2-201ENST00000265810 CNGB1Q14028 1251 aaPredicted RBP20.65■□□□□ 0.9
PDLIM2-201ENST00000265810 TOPBP1Q92547 1522 aa20.64■□□□□ 0.89
PDLIM2-201ENST00000265810 DIEXFQ68CQ4 756 aaKnown RBP20.64■□□□□ 0.89
PDLIM2-201ENST00000265810 FHOD3Q2V2M9 1422 aa20.64■□□□□ 0.89
PDLIM2-201ENST00000265810 TOP2BQ02880 1626 aa20.62■□□□□ 0.89
PDLIM2-201ENST00000265810 JPH4Q96JJ6 628 aa20.62■□□□□ 0.89
PDLIM2-201ENST00000265810 CARMIL2Q6F5E8 1435 aa20.62■□□□□ 0.89
PDLIM2-201ENST00000265810 FMN1Q68DA7 1419 aa20.59■□□□□ 0.89
PDLIM2-201ENST00000265810 MRC2Q9UBG0 1479 aa20.59■□□□□ 0.89
PDLIM2-201ENST00000265810 POLA1P09884 1462 aaPredicted RBP20.58■□□□□ 0.89
PDLIM2-201ENST00000265810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.57■□□□□ 0.88
PDLIM2-201ENST00000265810 LAMC3Q9Y6N6 1575 aa20.55■□□□□ 0.88
PDLIM2-201ENST00000265810 CCNB3Q8WWL7 1395 aa20.54■□□□□ 0.88
PDLIM2-201ENST00000265810 ZNF316A6NFI3 1004 aaPredicted RBP20.52■□□□□ 0.88
PDLIM2-201ENST00000265810 DNMBPQ6XZF7 1577 aa20.5■□□□□ 0.87
PDLIM2-201ENST00000265810 TONSLQ96HA7 1378 aa20.49■□□□□ 0.87
PDLIM2-201ENST00000265810 GRIN2BQ13224 1484 aa20.45■□□□□ 0.87
PDLIM2-201ENST00000265810 IFT140Q96RY7 1462 aa20.43■□□□□ 0.86
PDLIM2-201ENST00000265810 PRXQ9BXM0 1461 aa20.43■□□□□ 0.86
PDLIM2-201ENST00000265810 SLC4A1APQ9BWU0 796 aaKnown RBP20.43■□□□□ 0.86
PDLIM2-201ENST00000265810 ARHGAP35Q9NRY4 1499 aa20.41■□□□□ 0.86
PDLIM2-201ENST00000265810 PELP1Q8IZL8 1130 aaKnown RBP20.41■□□□□ 0.86
PDLIM2-201ENST00000265810 KIF21BO75037 1637 aa20.4■□□□□ 0.86
PDLIM2-201ENST00000265810 ESF1Q9H501 851 aaKnown RBP20.38■□□□□ 0.85
PDLIM2-201ENST00000265810 CHGAP10645 457 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-201ENST00000265810 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
PDLIM2-201ENST00000265810 URB2Q14146 1524 aaKnown RBP20.36■□□□□ 0.85
PDLIM2-201ENST00000265810 ABCA10Q8WWZ4 1543 aa20.34■□□□□ 0.85
PDLIM2-201ENST00000265810 OSCARQ8IYS5 282 aa20.33■□□□□ 0.84
PDLIM2-201ENST00000265810 PTPRGP23470 1445 aa20.32■□□□□ 0.84
PDLIM2-201ENST00000265810 PLPPR3Q6T4P5 718 aa20.29■□□□□ 0.84
PDLIM2-201ENST00000265810 KDM2AQ9Y2K7 1162 aa20.28■□□□□ 0.84
PDLIM2-201ENST00000265810 BCANQ96GW7 911 aa20.27■□□□□ 0.83
PDLIM2-201ENST00000265810 SNAPC4Q5SXM2 1469 aa20.26■□□□□ 0.83
PDLIM2-201ENST00000265810 ARAP1Q96P48 1450 aa20.26■□□□□ 0.83
PDLIM2-201ENST00000265810 SIN3AQ96ST3 1273 aa20.25■□□□□ 0.83
PDLIM2-201ENST00000265810 STAG3Q9UJ98 1225 aa20.25■□□□□ 0.83
PDLIM2-201ENST00000265810 ANP32CO43423 234 aa20.24■□□□□ 0.83
PDLIM2-201ENST00000265810 NEFLP07196 543 aa20.23■□□□□ 0.83
PDLIM2-201ENST00000265810 BIVM-ERCC5R4GMW8 1640 aa20.22■□□□□ 0.83
PDLIM2-201ENST00000265810 CCDC18Q5T9S5 1454 aa20.21■□□□□ 0.83
PDLIM2-201ENST00000265810 SETD5Q9C0A6 1442 aa20.21■□□□□ 0.83
PDLIM2-201ENST00000265810 ACIN1Q9UKV3 1341 aaKnown RBP20.2■□□□□ 0.82
PDLIM2-201ENST00000265810 EFCAB2Q5VUJ9 269 aa20.19■□□□□ 0.82
PDLIM2-201ENST00000265810 HIRIP3Q9BW71 556 aaPredicted RBP20.19■□□□□ 0.82
PDLIM2-201ENST00000265810 RGL3Q3MIN7 710 aa20.17■□□□□ 0.82
PDLIM2-201ENST00000265810 ZNF608Q9ULD9 1512 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-201ENST00000265810 CYB5RLQ6IPT4 315 aa20.16■□□□□ 0.82
PDLIM2-201ENST00000265810 HNRNPMP52272 730 aaKnown RBP eCLIP20.16■□□□□ 0.82
PDLIM2-201ENST00000265810 DDX10Q13206 875 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-201ENST00000265810 RAB3GAP2Q9H2M9 1393 aa20.14■□□□□ 0.82
PDLIM2-201ENST00000265810 CASKIN1Q8WXD9 1431 aa20.12■□□□□ 0.81
PDLIM2-201ENST00000265810 CLSPNQ9HAW4 1339 aa20.12■□□□□ 0.81
PDLIM2-201ENST00000265810 PRG4Q92954 1404 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-201ENST00000265810 TRHP20396 242 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-201ENST00000265810 ARID4BQ4LE39 1312 aaPredicted RBP20.07■□□□□ 0.8
PDLIM2-201ENST00000265810 FOXD1Q16676 465 aa20.06■□□□□ 0.8
PDLIM2-201ENST00000265810 LRRC9Q6ZRR7 1453 aa20.06■□□□□ 0.8
PDLIM2-201ENST00000265810 SENP3Q9H4L4 574 aaPredicted RBP20.05■□□□□ 0.8
PDLIM2-201ENST00000265810 PHLDB1Q86UU1 1377 aa20.05■□□□□ 0.8
PDLIM2-201ENST00000265810 EFCAB5A4FU69 1503 aa20.05■□□□□ 0.8
PDLIM2-201ENST00000265810 KIAA0586Q9BVV6 1533 aa20.05■□□□□ 0.8
PDLIM2-201ENST00000265810 PRDM2Q13029 1718 aa20.04■□□□□ 0.8
PDLIM2-201ENST00000265810 ANKRD30AQ9BXX3 1397 aa20.04■□□□□ 0.8
PDLIM2-201ENST00000265810 EIF4G2P78344 907 aaKnown RBP eCLIP20.03■□□□□ 0.8
PDLIM2-201ENST00000265810 CUL7Q14999 1698 aa20.02■□□□□ 0.79
PDLIM2-201ENST00000265810 SYNJ2O15056 1496 aa20.02■□□□□ 0.79
PDLIM2-201ENST00000265810 PKD2Q13563 968 aa20.01■□□□□ 0.79
PDLIM2-201ENST00000265810 FYCO1Q9BQS8 1478 aa20.01■□□□□ 0.79
PDLIM2-201ENST00000265810 MPHOSPH9Q99550 1183 aa20■□□□□ 0.79
PDLIM2-201ENST00000265810 ZNF644Q9H582 1327 aaPredicted RBP20■□□□□ 0.79
PDLIM2-201ENST00000265810 RSPH4AQ5TD94 716 aa20■□□□□ 0.79
PDLIM2-201ENST00000265810 GGT6Q6P531 493 aa19.99■□□□□ 0.79
PDLIM2-201ENST00000265810 GRIN2AQ12879 1464 aa19.99■□□□□ 0.79
PDLIM2-201ENST00000265810 MAGI1Q96QZ7 1491 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-201ENST00000265810 NUP155O75694 1391 aa19.97■□□□□ 0.79
PDLIM2-201ENST00000265810 SPAG9O60271 1321 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-201ENST00000265810 FGD6Q6ZV73 1430 aa19.96■□□□□ 0.79
PDLIM2-201ENST00000265810 MLECQ14165 292 aa19.95■□□□□ 0.78
PDLIM2-201ENST00000265810 KIF21AQ7Z4S6 1674 aa19.95■□□□□ 0.78
PDLIM2-201ENST00000265810 MYOM3Q5VTT5 1437 aa19.95■□□□□ 0.78
PDLIM2-201ENST00000265810 IQGAP2Q13576 1575 aa19.95■□□□□ 0.78
PDLIM2-201ENST00000265810 NCOA2Q15596 1464 aa19.94■□□□□ 0.78
PDLIM2-201ENST00000265810 KANK1Q14678 1352 aa19.92■□□□□ 0.78
PDLIM2-201ENST00000265810 KIF3BO15066 747 aa19.91■□□□□ 0.78
PDLIM2-201ENST00000265810 DCAF11Q8TEB1 546 aa19.9■□□□□ 0.78
PDLIM2-201ENST00000265810 TIMELESSQ9UNS1 1208 aa19.9■□□□□ 0.78
PDLIM2-201ENST00000265810 CARD11Q9BXL7 1154 aa19.89■□□□□ 0.78
PDLIM2-201ENST00000265810 PPP1R15AO75807 674 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-201ENST00000265810 MIER1Q8N108 512 aa19.87■□□□□ 0.77
PDLIM2-201ENST00000265810 DHX57Q6P158 1386 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-201ENST00000265810 TIAM1Q13009 1591 aa19.84■□□□□ 0.77
PDLIM2-201ENST00000265810 CDK13Q14004 1512 aaKnown RBP19.8■□□□□ 0.76
PDLIM2-201ENST00000265810 RRBP1Q9P2E9 1410 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms