RNA–Protein interactions for RNA: ENST00000265421.8

POLB-201, Transcript of DNA polymerase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLB, Length 1,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-201ENST00000265421 PRG4Q92954 1404 aaPredicted RBP18.77■□□□□ 0.6
POLB-201ENST00000265421 SHROOM2Q13796 1616 aa18.72■□□□□ 0.59
POLB-201ENST00000265421 CUL7Q14999 1698 aa18.72■□□□□ 0.59
POLB-201ENST00000265421 RUSC2Q8N2Y8 1516 aa18.71■□□□□ 0.59
POLB-201ENST00000265421 ERCC6L2Q5T890 1561 aa18.7■□□□□ 0.58
POLB-201ENST00000265421 RAPGEF2Q9Y4G8 1499 aa18.68■□□□□ 0.58
POLB-201ENST00000265421 TRHP20396 242 aaPredicted RBP18.68■□□□□ 0.58
POLB-201ENST00000265421 CSRNP3Q8WYN3 585 aa18.62■□□□□ 0.57
POLB-201ENST00000265421 PRXQ9BXM0 1461 aa18.6■□□□□ 0.57
POLB-201ENST00000265421 CARMIL2Q6F5E8 1435 aa18.58■□□□□ 0.56
POLB-201ENST00000265421 PTPRGP23470 1445 aa18.56■□□□□ 0.56
POLB-201ENST00000265421 TNIKQ9UKE5 1360 aa18.56■□□□□ 0.56
POLB-201ENST00000265421 NPM1P06748 294 aaKnown RBP eCLIP18.55■□□□□ 0.56
POLB-201ENST00000265421 EEA1Q15075 1411 aa18.54■□□□□ 0.56
POLB-201ENST00000265421 IQGAP2Q13576 1575 aa18.5■□□□□ 0.55
POLB-201ENST00000265421 UGGT2Q9NYU1 1516 aa18.49■□□□□ 0.55
POLB-201ENST00000265421 DISP1Q96F81 1524 aa18.48■□□□□ 0.55
POLB-201ENST00000265421 TTBK1Q5TCY1 1321 aaPredicted RBP18.43■□□□□ 0.54
POLB-201ENST00000265421 UACAQ9BZF9 1416 aa18.42■□□□□ 0.54
POLB-201ENST00000265421 UHRF1BP1LA0JNW5 1464 aa18.4■□□□□ 0.54
POLB-201ENST00000265421 FAM9AQ8IZU1 332 aaPredicted RBP18.4■□□□□ 0.54
POLB-201ENST00000265421 GOLGA3Q08378 1498 aa18.39■□□□□ 0.53
POLB-201ENST00000265421 FAM69CQ0P6D2 419 aa18.39■□□□□ 0.53
POLB-201ENST00000265421 MAPKBP1O60336 1514 aa18.38■□□□□ 0.53
POLB-201ENST00000265421 ABCC10Q5T3U5 1492 aa18.37■□□□□ 0.53
POLB-201ENST00000265421 ADCY10Q96PN6 1610 aa18.36■□□□□ 0.53
POLB-201ENST00000265421 ABCC2Q92887 1545 aa18.36■□□□□ 0.53
POLB-201ENST00000265421 KIAA0556O60303 1618 aa18.32■□□□□ 0.52
POLB-201ENST00000265421 KDM5BQ9UGL1 1544 aa18.29■□□□□ 0.52
POLB-201ENST00000265421 PLB1Q6P1J6 1458 aa18.29■□□□□ 0.52
POLB-201ENST00000265421 P3H3Q8IVL6 736 aa18.27■□□□□ 0.52
POLB-201ENST00000265421 ASXL2Q76L83 1435 aa18.27■□□□□ 0.52
POLB-201ENST00000265421 UBTFP17480 764 aaKnown RBP18.22■□□□□ 0.51
POLB-201ENST00000265421 CTTNBP2Q8WZ74 1663 aa18.21■□□□□ 0.51
POLB-201ENST00000265421 KIF21BO75037 1637 aa18.2■□□□□ 0.5
POLB-201ENST00000265421 ABCA8O94911 1581 aa18.19■□□□□ 0.5
POLB-201ENST00000265421 DIP2BQ9P265 1576 aa18.19■□□□□ 0.5
POLB-201ENST00000265421 RANGAP1P46060 587 aaPredicted RBP18.18■□□□□ 0.5
POLB-201ENST00000265421 SENP3Q9H4L4 574 aaPredicted RBP18.17■□□□□ 0.5
POLB-201ENST00000265421 GLI2P10070 1586 aa18.15■□□□□ 0.5
POLB-201ENST00000265421 EPRSP07814 1512 aaKnown RBP18.15■□□□□ 0.5
POLB-201ENST00000265421 SAMD9Q5K651 1589 aa18.14■□□□□ 0.49
POLB-201ENST00000265421 ATP10BO94823 1461 aa18.12■□□□□ 0.49
POLB-201ENST00000265421 WDR7Q9Y4E6 1490 aa18.12■□□□□ 0.49
POLB-201ENST00000265421 EHMT2Q96KQ7 1210 aa18.11■□□□□ 0.49
POLB-201ENST00000265421 FHOD3Q2V2M9 1422 aa18.11■□□□□ 0.49
POLB-201ENST00000265421 KCNH8Q96L42 1107 aa18.1■□□□□ 0.49
POLB-201ENST00000265421 KIF13AQ9H1H9 1805 aa18.1■□□□□ 0.49
POLB-201ENST00000265421 EFCAB5A4FU69 1503 aa18.09■□□□□ 0.49
POLB-201ENST00000265421 ZCCHC11Q5TAX3 1644 aaKnown RBP18.07■□□□□ 0.48
POLB-201ENST00000265421 ARID3CA6NKF2 412 aa18.07■□□□□ 0.48
POLB-201ENST00000265421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.04■□□□□ 0.48
POLB-201ENST00000265421 HNRNPUL2Q1KMD3 747 aaKnown RBP18.04■□□□□ 0.48
POLB-201ENST00000265421 NUP153P49790 1475 aaKnown RBP18.03■□□□□ 0.48
POLB-201ENST00000265421 PLEKHD1A6NEE1 506 aa18.03■□□□□ 0.48
POLB-201ENST00000265421 CD109Q6YHK3 1445 aa18.03■□□□□ 0.48
POLB-201ENST00000265421 TEX14Q8IWB6 1497 aa18.01■□□□□ 0.47
POLB-201ENST00000265421 ARHGAP35Q9NRY4 1499 aa18.01■□□□□ 0.47
POLB-201ENST00000265421 FMN1Q68DA7 1419 aa18■□□□□ 0.47
POLB-201ENST00000265421 PHF23Q9BUL5 403 aaPredicted RBP17.99■□□□□ 0.47
POLB-201ENST00000265421 MAGI3Q5TCQ9 1506 aa17.99■□□□□ 0.47
POLB-201ENST00000265421 RAPGEF6Q8TEU7 1601 aa17.98■□□□□ 0.47
POLB-201ENST00000265421 COL17A1Q9UMD9 1497 aaPredicted RBP17.96■□□□□ 0.47
POLB-201ENST00000265421 MAP3K4Q9Y6R4 1608 aa17.95■□□□□ 0.46
POLB-201ENST00000265421 PHLDB1Q86UU1 1377 aa17.94■□□□□ 0.46
POLB-201ENST00000265421 CDK11AQ9UQ88 783 aaPredicted RBP17.93■□□□□ 0.46
POLB-201ENST00000265421 KDM6BO15054 1643 aa17.92■□□□□ 0.46
POLB-201ENST00000265421 ATP1B4Q9UN42 357 aaPredicted RBP17.91■□□□□ 0.46
POLB-201ENST00000265421 PPRC1Q5VV67 1664 aaKnown RBP17.89■□□□□ 0.46
POLB-201ENST00000265421 CLIP1P30622 1438 aa17.87■□□□□ 0.45
POLB-201ENST00000265421 CFAP43Q8NDM7 1665 aa17.84■□□□□ 0.45
POLB-201ENST00000265421 CASKIN1Q8WXD9 1431 aa17.84■□□□□ 0.45
POLB-201ENST00000265421 TSPOAP1O95153 1857 aa17.84■□□□□ 0.45
POLB-201ENST00000265421 ARAP3Q8WWN8 1544 aa17.84■□□□□ 0.45
POLB-201ENST00000265421 ABCA9Q8IUA7 1624 aa17.83■□□□□ 0.45
POLB-201ENST00000265421 NEO1Q92859 1461 aa17.83■□□□□ 0.44
POLB-201ENST00000265421 CDK13Q14004 1512 aaKnown RBP17.8■□□□□ 0.44
POLB-201ENST00000265421 KDM4FA0A1W2PPD8 638 aa17.8■□□□□ 0.44
POLB-201ENST00000265421 RAPGEF3O95398 923 aa17.78■□□□□ 0.44
POLB-201ENST00000265421 TROQ12816 1431 aaPredicted RBP17.78■□□□□ 0.44
POLB-201ENST00000265421 HECW1Q76N89 1606 aa17.77■□□□□ 0.44
POLB-201ENST00000265421 PLCH2O75038 1416 aa17.77■□□□□ 0.44
POLB-201ENST00000265421 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.76■□□□□ 0.43
POLB-201ENST00000265421 LOC105371045A0A1W2PR82 267 aa17.76■□□□□ 0.43
POLB-201ENST00000265421 EFCAB2Q5VUJ9 269 aa17.75■□□□□ 0.43
POLB-201ENST00000265421 AKNAQ7Z591 1439 aa17.74■□□□□ 0.43
POLB-201ENST00000265421 CCDC18Q5T9S5 1454 aa17.74■□□□□ 0.43
POLB-201ENST00000265421 FANCAO15360 1455 aa17.73■□□□□ 0.43
POLB-201ENST00000265421 FYCO1Q9BQS8 1478 aa17.73■□□□□ 0.43
POLB-201ENST00000265421 CEP162Q5TB80 1403 aa17.72■□□□□ 0.43
POLB-201ENST00000265421 DENND4BO75064 1496 aaPredicted RBP17.7■□□□□ 0.42
POLB-201ENST00000265421 SCAPERQ9BY12 1400 aa17.65■□□□□ 0.42
POLB-201ENST00000265421 PCF11O94913 1555 aaKnown RBP17.64■□□□□ 0.42
POLB-201ENST00000265421 TTC37Q6PGP7 1564 aa17.64■□□□□ 0.42
POLB-201ENST00000265421 ADGRL1O94910 1474 aa17.62■□□□□ 0.41
POLB-201ENST00000265421 MAGI2Q86UL8 1455 aa17.61■□□□□ 0.41
POLB-201ENST00000265421 KIF14Q15058 1648 aa17.6■□□□□ 0.41
POLB-201ENST00000265421 MTUS2Q5JR59 1369 aa17.59■□□□□ 0.41
POLB-201ENST00000265421 CFAP74Q9C0B2 1584 aa17.58■□□□□ 0.41
POLB-201ENST00000265421 POGZQ7Z3K3 1410 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms